RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 CHMP7Q8WUX9 453 aaPredicted RBP6.25□□□□□ -1.41
RNU6-39P-201ENST00000384344 IQSEC3Q9UPP2 1182 aaPredicted RBP6.25□□□□□ -1.41
RNU6-39P-201ENST00000384344 ATAD2Q6PL18 1390 aa6.24□□□□□ -1.41
RNU6-39P-201ENST00000384344 H7C1W4 665 aa6.24□□□□□ -1.41
RNU6-39P-201ENST00000384344 FOXO3O43524 673 aa6.24□□□□□ -1.41
RNU6-39P-201ENST00000384344 TBCELQ5QJ74 424 aa6.24□□□□□ -1.41
RNU6-39P-201ENST00000384344 STAG2Q8N3U4 1231 aa6.24□□□□□ -1.41
RNU6-39P-201ENST00000384344 CLP1Q92989 425 aaKnown RBP6.24□□□□□ -1.41
RNU6-39P-201ENST00000384344 GAS2L1Q99501 681 aaPredicted RBP6.24□□□□□ -1.41
RNU6-39P-201ENST00000384344 PRMT3O60678 531 aa6.23□□□□□ -1.41
RNU6-39P-201ENST00000384344 F11P03951 625 aa6.23□□□□□ -1.41
RNU6-39P-201ENST00000384344 NOS2P35228 1153 aa6.23□□□□□ -1.41
RNU6-39P-201ENST00000384344 RIPOR1Q6ZS17 1223 aa6.23□□□□□ -1.41
RNU6-39P-201ENST00000384344 NPAS3Q8IXF0 933 aa6.23□□□□□ -1.41
RNU6-39P-201ENST00000384344 CCDC155Q8N6L0 562 aa6.23□□□□□ -1.41
RNU6-39P-201ENST00000384344 RETREG2Q8NC44 543 aa6.23□□□□□ -1.41
RNU6-39P-201ENST00000384344 SLC16A10Q8TF71 515 aa6.23□□□□□ -1.41
RNU6-39P-201ENST00000384344 L3MBTL2Q969R5 705 aa6.23□□□□□ -1.41
RNU6-39P-201ENST00000384344 ZDHHC3Q9NYG2 299 aa6.23□□□□□ -1.41
RNU6-39P-201ENST00000384344 NXF1Q9UBU9 619 aaKnown RBP6.23□□□□□ -1.41
RNU6-39P-201ENST00000384344 SLC35F4A4IF30 521 aa6.22□□□□□ -1.41
RNU6-39P-201ENST00000384344 ATP2B4P23634 1241 aa6.22□□□□□ -1.41
RNU6-39P-201ENST00000384344 WEE1P30291 646 aa6.22□□□□□ -1.41
RNU6-39P-201ENST00000384344 HIRAP54198 1017 aaPredicted RBP6.22□□□□□ -1.41
RNU6-39P-201ENST00000384344 HIF1AQ16665 826 aa6.22□□□□□ -1.41
RNU6-39P-201ENST00000384344 ARSJQ5FYB0 599 aaPredicted RBP6.22□□□□□ -1.41
RNU6-39P-201ENST00000384344 EFHC2Q5JST6 749 aa6.22□□□□□ -1.41
RNU6-39P-201ENST00000384344 FOXR1Q6PIV2 292 aa6.22□□□□□ -1.41
RNU6-39P-201ENST00000384344 BICDL1Q6ZP65 573 aa6.22□□□□□ -1.41
RNU6-39P-201ENST00000384344 GMCL1Q96IK5 515 aa6.22□□□□□ -1.41
RNU6-39P-201ENST00000384344 NEUROD4Q9HD90 331 aa6.22□□□□□ -1.41
RNU6-39P-201ENST00000384344 MTMR7Q9Y216 660 aa6.22□□□□□ -1.41
RNU6-39P-201ENST00000384344 GPC6Q9Y625 555 aaPredicted RBP6.22□□□□□ -1.41
RNU6-39P-201ENST00000384344 GJA3Q9Y6H8 435 aa6.22□□□□□ -1.41
RNU6-39P-201ENST00000384344 PTCD1O75127 700 aaKnown RBP6.21□□□□□ -1.42
RNU6-39P-201ENST00000384344 LGR5O75473 907 aa6.21□□□□□ -1.42
RNU6-39P-201ENST00000384344 ITGA6P23229 1130 aa6.21□□□□□ -1.42
RNU6-39P-201ENST00000384344 MSX1P28360 303 aa6.21□□□□□ -1.42
RNU6-39P-201ENST00000384344 PRIMPOLQ96LW4 560 aa6.21□□□□□ -1.42
RNU6-39P-201ENST00000384344 GPAMQ9HCL2 828 aa6.21□□□□□ -1.42
RNU6-39P-201ENST00000384344 PARP3Q9Y6F1 533 aa6.21□□□□□ -1.42
RNU6-39P-201ENST00000384344 USP3Q9Y6I4 520 aa6.21□□□□□ -1.42
RNU6-39P-201ENST00000384344 SENP3-EIF4A1A0A087X0R7 540 aa6.2□□□□□ -1.42
RNU6-39P-201ENST00000384344 TMEM88BA6NKF7 163 aa6.2□□□□□ -1.42
RNU6-39P-201ENST00000384344 EML1O00423 815 aa6.2□□□□□ -1.42
RNU6-39P-201ENST00000384344 C21orf2O43822 256 aa6.2□□□□□ -1.42
RNU6-39P-201ENST00000384344 PPFIA3O75145 1194 aa6.2□□□□□ -1.42
RNU6-39P-201ENST00000384344 FAM69CQ0P6D2 419 aa6.2□□□□□ -1.42
RNU6-39P-201ENST00000384344 LBRQ14739 615 aaKnown RBP6.2□□□□□ -1.42
RNU6-39P-201ENST00000384344 C1orf53Q5VUE5 145 aa6.2□□□□□ -1.42
RNU6-39P-201ENST00000384344 RHPN1Q8TCX5 695 aa6.2□□□□□ -1.42
RNU6-39P-201ENST00000384344 C2orf49Q9BVC5 232 aaPredicted RBP6.2□□□□□ -1.42
RNU6-39P-201ENST00000384344 CXXC1Q9P0U4 656 aaPredicted RBP6.2□□□□□ -1.42
RNU6-39P-201ENST00000384344 CDC14CA4D256 554 aa6.19□□□□□ -1.42
RNU6-39P-201ENST00000384344 FIGNL1Q6PIW4 674 aa6.19□□□□□ -1.42
RNU6-39P-201ENST00000384344 TRIM22Q8IYM9 498 aa6.19□□□□□ -1.42
RNU6-39P-201ENST00000384344 ZNF295-AS1Q8N0V1 137 aa6.19□□□□□ -1.42
RNU6-39P-201ENST00000384344 ZDHHC1Q8WTX9 485 aa6.19□□□□□ -1.42
RNU6-39P-201ENST00000384344 COL26A1Q96A83 441 aa6.19□□□□□ -1.42
RNU6-39P-201ENST00000384344 NGLY1Q96IV0 654 aa6.19□□□□□ -1.42
RNU6-39P-201ENST00000384344 PHACTR1Q9C0D0 580 aa6.19□□□□□ -1.42
RNU6-39P-201ENST00000384344 NUCKS1Q9H1E3 243 aaKnown RBP6.19□□□□□ -1.42
RNU6-39P-201ENST00000384344 ANKIB1Q9P2G1 1089 aa6.19□□□□□ -1.42
RNU6-39P-201ENST00000384344 HCN4Q9Y3Q4 1203 aa6.19□□□□□ -1.42
RNU6-39P-201ENST00000384344 TERTO14746 1132 aaKnown RBP6.18□□□□□ -1.42
RNU6-39P-201ENST00000384344 OCLNQ16625 522 aa6.18□□□□□ -1.42
RNU6-39P-201ENST00000384344 SV2AQ7L0J3 742 aa6.18□□□□□ -1.42
RNU6-39P-201ENST00000384344 ALDH16A1Q8IZ83 802 aa6.18□□□□□ -1.42
RNU6-39P-201ENST00000384344 TRERF1Q96PN7 1200 aa6.18□□□□□ -1.42
RNU6-39P-201ENST00000384344 CRISPLD1Q9H336 500 aa6.18□□□□□ -1.42
RNU6-39P-201ENST00000384344 H3BM21 787 aa6.17□□□□□ -1.42
RNU6-39P-201ENST00000384344 PDIA4P13667 645 aaKnown RBP6.17□□□□□ -1.42
RNU6-39P-201ENST00000384344 ATP4AP20648 1035 aa6.17□□□□□ -1.42
RNU6-39P-201ENST00000384344 TXLNAP40222 546 aa6.17□□□□□ -1.42
RNU6-39P-201ENST00000384344 FKBP5Q13451 457 aaPredicted RBP6.17□□□□□ -1.42
RNU6-39P-201ENST00000384344 RTN1Q16799 776 aa6.17□□□□□ -1.42
RNU6-39P-201ENST00000384344 POTEAQ6S8J7 498 aa6.17□□□□□ -1.42
RNU6-39P-201ENST00000384344 NLRP8Q86W28 1048 aa6.17□□□□□ -1.42
RNU6-39P-201ENST00000384344 IRF7Q92985 503 aa6.17□□□□□ -1.42
RNU6-39P-201ENST00000384344 RUBCNLQ9H714 662 aa6.17□□□□□ -1.42
RNU6-39P-201ENST00000384344 PHF24Q9UPV7 400 aa6.17□□□□□ -1.42
RNU6-39P-201ENST00000384344 A0A1W2PNR3 127 aa6.16□□□□□ -1.42
RNU6-39P-201ENST00000384344 VEGFBP49765 207 aa6.16□□□□□ -1.42
RNU6-39P-201ENST00000384344 MKNK1Q9BUB5 465 aa6.16□□□□□ -1.42
RNU6-39P-201ENST00000384344 PATL2C9JE40 543 aaKnown RBP6.15□□□□□ -1.42
RNU6-39P-201ENST00000384344 SSFA2P28290 1259 aa6.15□□□□□ -1.42
RNU6-39P-201ENST00000384344 SH3PXD2AQ5TCZ1 1133 aa6.15□□□□□ -1.42
RNU6-39P-201ENST00000384344 C16orf46Q6P387 395 aa6.15□□□□□ -1.42
RNU6-39P-201ENST00000384344 VWA5B2Q8N398 1253 aa6.15□□□□□ -1.42
RNU6-39P-201ENST00000384344 NANOS1Q8WY41 292 aaKnown RBP6.15□□□□□ -1.42
RNU6-39P-201ENST00000384344 ZNF837Q96EG3 531 aaPredicted RBP6.15□□□□□ -1.42
RNU6-39P-201ENST00000384344 BRD1O95696 1058 aa6.14□□□□□ -1.43
RNU6-39P-201ENST00000384344 HOMEZQ8IX15 550 aa6.14□□□□□ -1.43
RNU6-39P-201ENST00000384344 ZIC5Q96T25 663 aa6.14□□□□□ -1.43
RNU6-39P-201ENST00000384344 CARNS1A5YM72 827 aa6.13□□□□□ -1.43
RNU6-39P-201ENST00000384344 ATXN7O15265 892 aaPredicted RBP6.13□□□□□ -1.43
RNU6-39P-201ENST00000384344 WFS1O76024 890 aa6.13□□□□□ -1.43
RNU6-39P-201ENST00000384344 ARID4AP29374 1257 aaPredicted RBP6.13□□□□□ -1.43
RNU6-39P-201ENST00000384344 DBN1Q16643 649 aa6.13□□□□□ -1.43
RNU6-39P-201ENST00000384344 C11orf91Q3C1V1 193 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms