RNA–Protein interactions for RNA: ENST00000382438.5

NKX3-2-201, Transcript of NK3 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX3-2, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2-201ENST00000382438 SEC31AO94979 1220 aaKnown RBP24.87■■□□□ 1.57
NKX3-2-201ENST00000382438 EP400NLQ6ZTU2 488 aa24.87■■□□□ 1.57
NKX3-2-201ENST00000382438 FILIP1Q7Z7B0 1213 aa24.87■■□□□ 1.57
NKX3-2-201ENST00000382438 GPATCH11Q8N954 259 aa24.87■■□□□ 1.57
NKX3-2-201ENST00000382438 DNAJC25Q9H1X3 360 aa24.87■■□□□ 1.57
NKX3-2-201ENST00000382438 SMC3Q9UQE7 1217 aa24.87■■□□□ 1.57
NKX3-2-201ENST00000382438 SPHKAPQ2M3C7 1700 aa24.87■■□□□ 1.57
NKX3-2-201ENST00000382438 TWISTNBQ3B726 338 aaPredicted RBP24.86■■□□□ 1.57
NKX3-2-201ENST00000382438 GORABQ5T7V8 394 aa24.86■■□□□ 1.57
NKX3-2-201ENST00000382438 API5Q9BZZ5 524 aaKnown RBP24.86■■□□□ 1.57
NKX3-2-201ENST00000382438 FAM173BQ6P4H8 233 aa24.86■■□□□ 1.57
NKX3-2-201ENST00000382438 C8orf58Q8NAV2 365 aa24.86■■□□□ 1.57
NKX3-2-201ENST00000382438 ATP6V1DQ9Y5K8 247 aa24.86■■□□□ 1.57
NKX3-2-201ENST00000382438 ANAPC15P60006 121 aa24.85■■□□□ 1.57
NKX3-2-201ENST00000382438 TNMDQ9H2S6 317 aa24.85■■□□□ 1.57
NKX3-2-201ENST00000382438 IL25Q9H293 177 aa24.85■■□□□ 1.57
NKX3-2-201ENST00000382438 VPS37CA5D8V6 355 aaPredicted RBP24.85■■□□□ 1.57
NKX3-2-201ENST00000382438 ZNF165P49910 485 aa24.85■■□□□ 1.57
NKX3-2-201ENST00000382438 TPM4P67936 248 aa24.85■■□□□ 1.57
NKX3-2-201ENST00000382438 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.85■■□□□ 1.57
NKX3-2-201ENST00000382438 USP16Q9Y5T5 823 aa24.85■■□□□ 1.57
NKX3-2-201ENST00000382438 DACT1Q9NYF0 836 aa24.84■■□□□ 1.57
NKX3-2-201ENST00000382438 DRC1Q96MC2 740 aa24.84■■□□□ 1.57
NKX3-2-201ENST00000382438 ATG3Q9NT62 314 aa24.84■■□□□ 1.57
NKX3-2-201ENST00000382438 UHRF1BP1LA0JNW5 1464 aa24.84■■□□□ 1.57
NKX3-2-201ENST00000382438 SYCP2Q9BX26 1530 aa24.83■■□□□ 1.57
NKX3-2-201ENST00000382438 TTC6Q86TZ1 520 aa24.83■■□□□ 1.57
NKX3-2-201ENST00000382438 MBIPQ9NS73 344 aa24.83■■□□□ 1.57
NKX3-2-201ENST00000382438 ATP10BO94823 1461 aa24.83■■□□□ 1.57
NKX3-2-201ENST00000382438 RPAP2Q8IXW5 612 aaPredicted RBP24.83■■□□□ 1.57
NKX3-2-201ENST00000382438 CCAR2Q8N163 923 aaKnown RBP24.83■■□□□ 1.57
NKX3-2-201ENST00000382438 CHMLP26374 656 aa24.82■■□□□ 1.56
NKX3-2-201ENST00000382438 TMCO3Q6UWJ1 677 aa24.82■■□□□ 1.56
NKX3-2-201ENST00000382438 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.82■■□□□ 1.56
NKX3-2-201ENST00000382438 MAST1Q9Y2H9 1570 aa24.82■■□□□ 1.56
NKX3-2-201ENST00000382438 CCDC69A6NI79 296 aa24.82■■□□□ 1.56
NKX3-2-201ENST00000382438 CPA1P15085 419 aa24.82■■□□□ 1.56
NKX3-2-201ENST00000382438 PRKAR2BP31323 418 aa24.82■■□□□ 1.56
NKX3-2-201ENST00000382438 AK2P54819 239 aa24.82■■□□□ 1.56
NKX3-2-201ENST00000382438 RNF20Q5VTR2 975 aa24.82■■□□□ 1.56
NKX3-2-201ENST00000382438 FERMT3Q86UX7 667 aa24.82■■□□□ 1.56
NKX3-2-201ENST00000382438 RRP15Q9Y3B9 282 aaKnown RBP24.82■■□□□ 1.56
NKX3-2-201ENST00000382438 ATP10DQ9P241 1426 aa24.81■■□□□ 1.56
NKX3-2-201ENST00000382438 YEATS2Q9ULM3 1422 aa24.81■■□□□ 1.56
NKX3-2-201ENST00000382438 SRLQ86TD4 932 aa24.81■■□□□ 1.56
NKX3-2-201ENST00000382438 MEIS3Q99687 375 aa24.81■■□□□ 1.56
NKX3-2-201ENST00000382438 ZRANB2O95218 330 aaKnown RBP eCLIP24.81■■□□□ 1.56
NKX3-2-201ENST00000382438 OAS2P29728 719 aaKnown RBP24.81■■□□□ 1.56
NKX3-2-201ENST00000382438 SART3Q15020 963 aaKnown RBP24.81■■□□□ 1.56
NKX3-2-201ENST00000382438 TDRD7Q8NHU6 1098 aaKnown RBP24.81■■□□□ 1.56
NKX3-2-201ENST00000382438 MTMR6Q9Y217 621 aa24.81■■□□□ 1.56
NKX3-2-201ENST00000382438 LARGE1O95461 756 aa24.81■■□□□ 1.56
NKX3-2-201ENST00000382438 GJB2P29033 226 aa24.81■■□□□ 1.56
NKX3-2-201ENST00000382438 CCDC34Q96HJ3 373 aa24.81■■□□□ 1.56
NKX3-2-201ENST00000382438 TMEM132EQ6IEE7 984 aa24.8■■□□□ 1.56
NKX3-2-201ENST00000382438 CCDC83Q8IWF9 413 aa24.8■■□□□ 1.56
NKX3-2-201ENST00000382438 DIAPH1O60610 1272 aaKnown RBP24.8■■□□□ 1.56
NKX3-2-201ENST00000382438 BRD2P25440 801 aaKnown RBP24.8■■□□□ 1.56
NKX3-2-201ENST00000382438 MYCBPQ99417 103 aaPredicted RBP24.8■■□□□ 1.56
NKX3-2-201ENST00000382438 RUFY3Q7L099 469 aa24.79■■□□□ 1.56
NKX3-2-201ENST00000382438 UNC5CLQ8IV45 518 aa24.79■■□□□ 1.56
NKX3-2-201ENST00000382438 PHACTR3Q96KR7 559 aa24.79■■□□□ 1.56
NKX3-2-201ENST00000382438 CCZ1BP86790 482 aa24.79■■□□□ 1.56
NKX3-2-201ENST00000382438 CCZ1P86791 482 aaPredicted RBP24.79■■□□□ 1.56
NKX3-2-201ENST00000382438 GPS2Q13227 327 aa24.79■■□□□ 1.56
NKX3-2-201ENST00000382438 EPC1Q9H2F5 836 aa24.79■■□□□ 1.56
NKX3-2-201ENST00000382438 NCAPGQ9BPX3 1015 aa24.78■■□□□ 1.56
NKX3-2-201ENST00000382438 JRKLQ9Y4A0 524 aa24.78■■□□□ 1.56
NKX3-2-201ENST00000382438 GUCY2CP25092 1073 aa24.78■■□□□ 1.56
NKX3-2-201ENST00000382438 CTR9Q6PD62 1173 aa24.78■■□□□ 1.56
NKX3-2-201ENST00000382438 SLC26A8Q96RN1 970 aa24.78■■□□□ 1.56
NKX3-2-201ENST00000382438 HMOX1P09601 288 aa24.77■■□□□ 1.56
NKX3-2-201ENST00000382438 CASTP20810 708 aaKnown RBP24.77■■□□□ 1.56
NKX3-2-201ENST00000382438 LMAN1P49257 510 aa24.77■■□□□ 1.56
NKX3-2-201ENST00000382438 MYOM2P54296 1465 aa24.77■■□□□ 1.56
NKX3-2-201ENST00000382438 SASH3O75995 380 aa24.77■■□□□ 1.56
NKX3-2-201ENST00000382438 SNW1Q13573 536 aaKnown RBP24.77■■□□□ 1.56
NKX3-2-201ENST00000382438 PACS2Q86VP3 889 aa24.76■■□□□ 1.55
NKX3-2-201ENST00000382438 CWC15Q9P013 229 aaKnown RBP24.76■■□□□ 1.55
NKX3-2-201ENST00000382438 REXO1L1PQ8IX06 675 aa24.76■■□□□ 1.55
NKX3-2-201ENST00000382438 CHMP7Q8WUX9 453 aaPredicted RBP24.76■■□□□ 1.55
NKX3-2-201ENST00000382438 OSBPL3Q9H4L5 887 aa24.76■■□□□ 1.55
NKX3-2-201ENST00000382438 CABP2Q9NPB3 220 aa24.76■■□□□ 1.55
NKX3-2-201ENST00000382438 ARHGEF40Q8TER5 1519 aa24.75■■□□□ 1.55
NKX3-2-201ENST00000382438 FBLN1P23142 703 aa24.75■■□□□ 1.55
NKX3-2-201ENST00000382438 FBXO18Q8NFZ0 1043 aa24.75■■□□□ 1.55
NKX3-2-201ENST00000382438 L2HGDHQ9H9P8 463 aa24.75■■□□□ 1.55
NKX3-2-201ENST00000382438 TFIP11Q9UBB9 837 aaKnown RBP24.75■■□□□ 1.55
NKX3-2-201ENST00000382438 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.75■■□□□ 1.55
NKX3-2-201ENST00000382438 MRC2Q9UBG0 1479 aa24.75■■□□□ 1.55
NKX3-2-201ENST00000382438 LMOD3Q0VAK6 560 aa24.75■■□□□ 1.55
NKX3-2-201ENST00000382438 KCNG1Q9UIX4 513 aa24.75■■□□□ 1.55
NKX3-2-201ENST00000382438 LIMCH1Q9UPQ0 1083 aa24.75■■□□□ 1.55
NKX3-2-201ENST00000382438 GOLGA6L4A6NEF3 574 aa24.74■■□□□ 1.55
NKX3-2-201ENST00000382438 UBXN4Q92575 508 aa24.74■■□□□ 1.55
NKX3-2-201ENST00000382438 E2F4Q16254 413 aa24.74■■□□□ 1.55
NKX3-2-201ENST00000382438 ARGLU1Q9NWB6 273 aaPredicted RBP24.74■■□□□ 1.55
NKX3-2-201ENST00000382438 GOLGA6L19H0YKK7 550 aa24.73■■□□□ 1.55
NKX3-2-201ENST00000382438 GNAI1P63096 354 aa24.73■■□□□ 1.55
NKX3-2-201ENST00000382438 SMC1AQ14683 1233 aaKnown RBP24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms