RNA–Protein interactions for RNA: ENST00000382203.5

SMARCA2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCA2, Length 5,867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-209ENST00000382203 K7ELQ4 463 aaPredicted RBP14.25□□□□□ -0.13
SMARCA2-209ENST00000382203 MAP4K4O95819 1239 aaPredicted RBP14.25□□□□□ -0.13
SMARCA2-209ENST00000382203 GAS2L2Q8NHY3 880 aa14.25□□□□□ -0.13
SMARCA2-209ENST00000382203 DDX27Q96GQ7 796 aaKnown RBP14.25□□□□□ -0.13
SMARCA2-209ENST00000382203 VCXQ9H320 206 aa14.25□□□□□ -0.13
SMARCA2-209ENST00000382203 FAM177BA6PVY3 158 aa14.25□□□□□ -0.13
SMARCA2-209ENST00000382203 TRIM22Q8IYM9 498 aa14.25□□□□□ -0.13
SMARCA2-209ENST00000382203 NOL7Q9UMY1 257 aaKnown RBP14.25□□□□□ -0.13
SMARCA2-209ENST00000382203 ABCC8Q09428 1581 aa14.25□□□□□ -0.13
SMARCA2-209ENST00000382203 MGEA5O60502 916 aa14.25□□□□□ -0.13
SMARCA2-209ENST00000382203 SNW1Q13573 536 aaKnown RBP14.25□□□□□ -0.13
SMARCA2-209ENST00000382203 PLEKHO1Q53GL0 409 aaPredicted RBP14.25□□□□□ -0.13
SMARCA2-209ENST00000382203 STMN2Q93045 179 aa14.25□□□□□ -0.13
SMARCA2-209ENST00000382203 TTC14Q96N46 770 aa14.25□□□□□ -0.13
SMARCA2-209ENST00000382203 CCDC171Q6TFL3 1326 aa14.25□□□□□ -0.13
SMARCA2-209ENST00000382203 OPA1O60313 960 aa14.25□□□□□ -0.13
SMARCA2-209ENST00000382203 SF3B2Q13435 895 aaKnown RBP14.25□□□□□ -0.13
SMARCA2-209ENST00000382203 RBM42Q9BTD8 480 aaKnown RBP14.25□□□□□ -0.13
SMARCA2-209ENST00000382203 DNAI2Q9GZS0 605 aa14.25□□□□□ -0.13
SMARCA2-209ENST00000382203 GPRASP1Q5JY77 1395 aa14.24□□□□□ -0.13
SMARCA2-209ENST00000382203 CKAP4Q07065 602 aaKnown RBP14.24□□□□□ -0.13
SMARCA2-209ENST00000382203 VPS36Q86VN1 386 aa14.24□□□□□ -0.13
SMARCA2-209ENST00000382203 WIZO95785 1651 aa14.24□□□□□ -0.13
SMARCA2-209ENST00000382203 RBBP5Q15291 538 aaKnown RBP14.24□□□□□ -0.13
SMARCA2-209ENST00000382203 ANKRD1Q15327 319 aa14.24□□□□□ -0.13
SMARCA2-209ENST00000382203 MAP7D1Q3KQU3 841 aa14.24□□□□□ -0.13
SMARCA2-209ENST00000382203 NBPF11Q86T75 865 aa14.24□□□□□ -0.13
SMARCA2-209ENST00000382203 TSNARE1Q96NA8 513 aa14.24□□□□□ -0.13
SMARCA2-209ENST00000382203 ZSWIM4Q9H7M6 989 aa14.24□□□□□ -0.13
SMARCA2-209ENST00000382203 MATR3P43243 847 aaKnown RBP eCLIP14.24□□□□□ -0.13
SMARCA2-209ENST00000382203 LARP1BQ659C4 914 aaKnown RBP14.24□□□□□ -0.13
SMARCA2-209ENST00000382203 CEP135Q66GS9 1140 aa14.24□□□□□ -0.13
SMARCA2-209ENST00000382203 BMP2KQ9NSY1 1161 aaPredicted RBP14.24□□□□□ -0.13
SMARCA2-209ENST00000382203 SURF6O75683 361 aaKnown RBP14.23□□□□□ -0.13
SMARCA2-209ENST00000382203 MAP7Q14244 749 aa14.23□□□□□ -0.13
SMARCA2-209ENST00000382203 NAA16Q6N069 864 aaPredicted RBP14.23□□□□□ -0.13
SMARCA2-209ENST00000382203 ZSCAN25Q6NSZ9 544 aa14.23□□□□□ -0.13
SMARCA2-209ENST00000382203 PPP1R9BQ96SB3 815 aa14.23□□□□□ -0.13
SMARCA2-209ENST00000382203 BUB1BO60566 1050 aaPredicted RBP14.23□□□□□ -0.13
SMARCA2-209ENST00000382203 RUFY3Q7L099 469 aa14.23□□□□□ -0.13
SMARCA2-209ENST00000382203 SREK1Q8WXA9 508 aaKnown RBP14.23□□□□□ -0.13
SMARCA2-209ENST00000382203 ALS2CR12Q96Q35 445 aa14.23□□□□□ -0.13
SMARCA2-209ENST00000382203 PPFIA2O75334 1257 aa14.23□□□□□ -0.13
SMARCA2-209ENST00000382203 ZNF622Q969S3 477 aaKnown RBP eCLIP14.23□□□□□ -0.131e-6■■■■□ 25.4
SMARCA2-209ENST00000382203 ATP6V1AP38606 617 aa14.22□□□□□ -0.13
SMARCA2-209ENST00000382203 CPLX4Q7Z7G2 160 aa14.22□□□□□ -0.13
SMARCA2-209ENST00000382203 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.22□□□□□ -0.134e-6■■■■□ 24.4
SMARCA2-209ENST00000382203 IQCGQ9H095 443 aaKnown RBP14.22□□□□□ -0.13
SMARCA2-209ENST00000382203 CCDC88BA6NC98 1476 aa14.22□□□□□ -0.13
SMARCA2-209ENST00000382203 PFDN1O60925 122 aa14.22□□□□□ -0.13
SMARCA2-209ENST00000382203 ATP11AP98196 1134 aa14.22□□□□□ -0.13
SMARCA2-209ENST00000382203 CCDC38Q502W7 563 aa14.22□□□□□ -0.13
SMARCA2-209ENST00000382203 SH3BGRP55822 239 aaPredicted RBP14.22□□□□□ -0.13
SMARCA2-209ENST00000382203 TSNAXIP1Q2TAA8 658 aa14.22□□□□□ -0.13
SMARCA2-209ENST00000382203 JPH4Q96JJ6 628 aa14.22□□□□□ -0.13
SMARCA2-209ENST00000382203 MVPQ14764 893 aaKnown RBP14.21□□□□□ -0.13
SMARCA2-209ENST00000382203 CACNA2D4Q7Z3S7 1137 aa14.21□□□□□ -0.13
SMARCA2-209ENST00000382203 GSDMDP57764 484 aa14.21□□□□□ -0.13
SMARCA2-209ENST00000382203 CTNNA2P26232 953 aa14.21□□□□□ -0.13
SMARCA2-209ENST00000382203 CLCN1P35523 988 aa14.21□□□□□ -0.13
SMARCA2-209ENST00000382203 FKBP15Q5T1M5 1219 aa14.21□□□□□ -0.14
SMARCA2-209ENST00000382203 VPS18Q9P253 973 aa14.2□□□□□ -0.14
SMARCA2-209ENST00000382203 USP25Q9UHP3 1055 aa14.2□□□□□ -0.14
SMARCA2-209ENST00000382203 BICDL2A1A5D9 508 aa14.2□□□□□ -0.14
SMARCA2-209ENST00000382203 KRBA2Q6ZNG9 492 aa14.2□□□□□ -0.14
SMARCA2-209ENST00000382203 ANO10Q9NW15 660 aa14.2□□□□□ -0.14
SMARCA2-209ENST00000382203 CYP46A1Q9Y6A2 500 aa14.2□□□□□ -0.14
SMARCA2-209ENST00000382203 RBM5P52756 815 aaKnown RBP eCLIP14.2□□□□□ -0.14
SMARCA2-209ENST00000382203 DDX12PQ92771 950 aa14.2□□□□□ -0.14
SMARCA2-209ENST00000382203 CCDC50Q8IVM0 306 aa14.2□□□□□ -0.14
SMARCA2-209ENST00000382203 MICAL1Q8TDZ2 1067 aa14.2□□□□□ -0.14
SMARCA2-209ENST00000382203 ZEB2O60315 1214 aa14.2□□□□□ -0.14
SMARCA2-209ENST00000382203 MAP3K7CLP57077 242 aa14.2□□□□□ -0.14
SMARCA2-209ENST00000382203 LCA5Q86VQ0 697 aa14.2□□□□□ -0.14
SMARCA2-209ENST00000382203 CCDC12Q8WUD4 166 aaPredicted RBP14.2□□□□□ -0.14
SMARCA2-209ENST00000382203 STAC3Q96MF2 364 aa14.2□□□□□ -0.14
SMARCA2-209ENST00000382203 SPATS2LQ9NUQ6 558 aaKnown RBP14.2□□□□□ -0.14
SMARCA2-209ENST00000382203 CDKL5O76039 1030 aa14.19□□□□□ -0.14
SMARCA2-209ENST00000382203 YEATS4O95619 227 aa14.19□□□□□ -0.14
SMARCA2-209ENST00000382203 CAMK4Q16566 473 aa14.19□□□□□ -0.14
SMARCA2-209ENST00000382203 NUTM2GQ5VZR2 741 aa14.19□□□□□ -0.14
SMARCA2-209ENST00000382203 KLHL10Q6JEL2 608 aa14.19□□□□□ -0.14
SMARCA2-209ENST00000382203 PRPF31Q8WWY3 499 aaKnown RBP14.19□□□□□ -0.14
SMARCA2-209ENST00000382203 GNAI2P04899 355 aa14.19□□□□□ -0.14
SMARCA2-209ENST00000382203 NEDD9Q14511 834 aa14.19□□□□□ -0.14
SMARCA2-209ENST00000382203 PANK1Q8TE04 598 aa14.19□□□□□ -0.14
SMARCA2-209ENST00000382203 PPP1R1BQ9UD71 204 aaPredicted RBP14.19□□□□□ -0.14
SMARCA2-209ENST00000382203 GNG11P61952 73 aa14.19□□□□□ -0.14
SMARCA2-209ENST00000382203 USH1CQ9Y6N9 552 aa14.19□□□□□ -0.14
SMARCA2-209ENST00000382203 SAMD15Q9P1V8 674 aa14.19□□□□□ -0.14
SMARCA2-209ENST00000382203 GCC1Q96CN9 775 aa14.18□□□□□ -0.14
SMARCA2-209ENST00000382203 STMN4Q9H169 189 aaPredicted RBP14.18□□□□□ -0.14
SMARCA2-209ENST00000382203 PRC1O43663 620 aa14.18□□□□□ -0.14
SMARCA2-209ENST00000382203 ARFGAP2Q8N6H7 521 aa14.18□□□□□ -0.14
SMARCA2-209ENST00000382203 IFT74Q96LB3 600 aa14.18□□□□□ -0.14
SMARCA2-209ENST00000382203 CIB2O75838 187 aa14.18□□□□□ -0.14
SMARCA2-209ENST00000382203 ZNF76P36508 570 aa14.18□□□□□ -0.14
SMARCA2-209ENST00000382203 NLRP6P59044 892 aa14.18□□□□□ -0.14
SMARCA2-209ENST00000382203 STK3Q13188 491 aa14.18□□□□□ -0.14
SMARCA2-209ENST00000382203 POTEDQ86YR6 584 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms