RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 UGGT1Q9NYU2 1555 aa17.78■□□□□ 0.44
VLDLR-202ENST00000382099 CCDC91Q7Z6B0 441 aa17.77■□□□□ 0.44
VLDLR-202ENST00000382099 SKILP12757 684 aa17.77■□□□□ 0.43
VLDLR-202ENST00000382099 UBXN4Q92575 508 aa17.77■□□□□ 0.43
VLDLR-202ENST00000382099 LARP6Q9BRS8 491 aaKnown RBP17.77■□□□□ 0.43
VLDLR-202ENST00000382099 CCDC171Q6TFL3 1326 aa17.77■□□□□ 0.43
VLDLR-202ENST00000382099 ZCCHC11Q5TAX3 1644 aaKnown RBP17.77■□□□□ 0.43
VLDLR-202ENST00000382099 ZFYVE16Q7Z3T8 1539 aa17.76■□□□□ 0.43
VLDLR-202ENST00000382099 ERC2O15083 957 aa17.76■□□□□ 0.43
VLDLR-202ENST00000382099 ATP2B1P20020 1258 aa17.76■□□□□ 0.43
VLDLR-202ENST00000382099 CFAP53Q96M91 514 aa17.76■□□□□ 0.43
VLDLR-202ENST00000382099 FBXO18Q8NFZ0 1043 aa17.76■□□□□ 0.43
VLDLR-202ENST00000382099 ABCA6Q8N139 1617 aa17.76■□□□□ 0.43
VLDLR-202ENST00000382099 DEPDC5O75140 1603 aa17.76■□□□□ 0.43
VLDLR-202ENST00000382099 CASTP20810 708 aaKnown RBP17.76■□□□□ 0.43
VLDLR-202ENST00000382099 LRRN4CLQ8ND94 238 aa17.76■□□□□ 0.43
VLDLR-202ENST00000382099 SUFUQ9UMX1 484 aa17.76■□□□□ 0.43
VLDLR-202ENST00000382099 KIAA1210Q9ULL0 1709 aa17.75■□□□□ 0.43
VLDLR-202ENST00000382099 ZNF75DP51815 510 aa17.75■□□□□ 0.43
VLDLR-202ENST00000382099 CCDC144BQ3MJ40 725 aa17.75■□□□□ 0.43
VLDLR-202ENST00000382099 CCDC144CPQ8IYA2 1237 aa17.75■□□□□ 0.43
VLDLR-202ENST00000382099 GOLGA5Q8TBA6 731 aa17.75■□□□□ 0.43
VLDLR-202ENST00000382099 ADGRF5Q8IZF2 1346 aa17.75■□□□□ 0.43
VLDLR-202ENST00000382099 PPIP5K1Q6PFW1 1433 aa17.75■□□□□ 0.43
VLDLR-202ENST00000382099 ELL2O00472 640 aaPredicted RBP17.75■□□□□ 0.43
VLDLR-202ENST00000382099 MCM2P49736 904 aa17.75■□□□□ 0.43
VLDLR-202ENST00000382099 MTHFSP49914 203 aa17.75■□□□□ 0.43
VLDLR-202ENST00000382099 ANO6Q4KMQ2 910 aa17.75■□□□□ 0.43
VLDLR-202ENST00000382099 TET3O43151 1660 aa17.74■□□□□ 0.43
VLDLR-202ENST00000382099 MCCP23508 829 aa17.74■□□□□ 0.43
VLDLR-202ENST00000382099 TYRO3Q06418 890 aa17.74■□□□□ 0.43
VLDLR-202ENST00000382099 GNL2Q13823 731 aaKnown RBP17.74■□□□□ 0.43
VLDLR-202ENST00000382099 H2AFXP16104 143 aaPredicted RBP17.74■□□□□ 0.43
VLDLR-202ENST00000382099 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.74■□□□□ 0.43
VLDLR-202ENST00000382099 MNS1Q8NEH6 495 aa17.74■□□□□ 0.43
VLDLR-202ENST00000382099 FUCA2Q9BTY2 467 aa17.74■□□□□ 0.43
VLDLR-202ENST00000382099 ANO2Q9NQ90 1003 aa17.74■□□□□ 0.43
VLDLR-202ENST00000382099 SHPRHQ149N8 1683 aa17.73■□□□□ 0.43
VLDLR-202ENST00000382099 MAP3K11Q16584 847 aa17.73■□□□□ 0.43
VLDLR-202ENST00000382099 PLPPR3Q6T4P5 718 aa17.73■□□□□ 0.43
VLDLR-202ENST00000382099 CBX8Q9HC52 389 aa17.73■□□□□ 0.43
VLDLR-202ENST00000382099 CT47B1P0C2W7 299 aaPredicted RBP17.73■□□□□ 0.43
VLDLR-202ENST00000382099 SMC1AQ14683 1233 aaKnown RBP17.73■□□□□ 0.43
VLDLR-202ENST00000382099 SIRT2Q8IXJ6 389 aa17.72■□□□□ 0.43
VLDLR-202ENST00000382099 ANKRD20A12PQ8NF67 263 aa17.72■□□□□ 0.43
VLDLR-202ENST00000382099 MAP3K4Q9Y6R4 1608 aa17.72■□□□□ 0.43
VLDLR-202ENST00000382099 GOLIM4O00461 696 aa17.72■□□□□ 0.43
VLDLR-202ENST00000382099 MAP2K2P36507 400 aa17.72■□□□□ 0.43
VLDLR-202ENST00000382099 HOMER1Q86YM7 354 aa17.72■□□□□ 0.43
VLDLR-202ENST00000382099 ATG3Q9NT62 314 aa17.72■□□□□ 0.43
VLDLR-202ENST00000382099 GOLGA6L4A6NEF3 574 aa17.72■□□□□ 0.43
VLDLR-202ENST00000382099 ZBTB7BO15156 539 aaPredicted RBP17.72■□□□□ 0.43
VLDLR-202ENST00000382099 DNM1Q05193 864 aaKnown RBP17.72■□□□□ 0.43
VLDLR-202ENST00000382099 NUP62CLQ9H1M0 184 aa17.72■□□□□ 0.43
VLDLR-202ENST00000382099 SLC12A5Q9H2X9 1139 aa17.72■□□□□ 0.43
VLDLR-202ENST00000382099 MAGEA9P43362 315 aa17.71■□□□□ 0.43
VLDLR-202ENST00000382099 CFAP74Q9C0B2 1584 aa17.71■□□□□ 0.43
VLDLR-202ENST00000382099 SNW1Q13573 536 aaKnown RBP17.71■□□□□ 0.43
VLDLR-202ENST00000382099 SATB1Q01826 763 aa17.7■□□□□ 0.42
VLDLR-202ENST00000382099 PDRG1Q9NUG6 133 aa17.7■□□□□ 0.42
VLDLR-202ENST00000382099 GOLGA6L19H0YKK7 550 aa17.7■□□□□ 0.42
VLDLR-202ENST00000382099 ZSCAN22P10073 491 aaPredicted RBP17.7■□□□□ 0.42
VLDLR-202ENST00000382099 LRRC8AQ8IWT6 810 aa17.7■□□□□ 0.42
VLDLR-202ENST00000382099 PHF23Q9BUL5 403 aaPredicted RBP17.7■□□□□ 0.42
VLDLR-202ENST00000382099 TNMDQ9H2S6 317 aa17.7■□□□□ 0.42
VLDLR-202ENST00000382099 DONSONQ9NYP3 566 aa17.7■□□□□ 0.42
VLDLR-202ENST00000382099 PALD1Q9ULE6 856 aa17.7■□□□□ 0.42
VLDLR-202ENST00000382099 VWDEQ8N2E2 1590 aa17.7■□□□□ 0.42
VLDLR-202ENST00000382099 EIF3CLB5ME19 914 aaKnown RBP17.7■□□□□ 0.42
VLDLR-202ENST00000382099 CUL4AQ13619 759 aa17.7■□□□□ 0.42
VLDLR-202ENST00000382099 INTS4Q96HW7 963 aaKnown RBP17.7■□□□□ 0.42
VLDLR-202ENST00000382099 EIF3CQ99613 913 aaKnown RBP17.7■□□□□ 0.42
VLDLR-202ENST00000382099 MRVI1Q9Y6F6 885 aa17.7■□□□□ 0.42
VLDLR-202ENST00000382099 POLR3AO14802 1390 aaPredicted RBP17.7■□□□□ 0.42
VLDLR-202ENST00000382099 VPS37CA5D8V6 355 aaPredicted RBP17.69■□□□□ 0.42
VLDLR-202ENST00000382099 ATP6V1AP38606 617 aa17.69■□□□□ 0.42
VLDLR-202ENST00000382099 MNAT1P51948 309 aa17.69■□□□□ 0.42
VLDLR-202ENST00000382099 EPC1Q9H2F5 836 aa17.69■□□□□ 0.42
VLDLR-202ENST00000382099 ERBB3P21860 1342 aa17.69■□□□□ 0.42
VLDLR-202ENST00000382099 CCDC69A6NI79 296 aa17.69■□□□□ 0.42
VLDLR-202ENST00000382099 FBLN1P23142 703 aa17.69■□□□□ 0.42
VLDLR-202ENST00000382099 ACTN2P35609 894 aa17.69■□□□□ 0.42
VLDLR-202ENST00000382099 ATP6V1DQ9Y5K8 247 aa17.69■□□□□ 0.42
VLDLR-202ENST00000382099 ZNF165P49910 485 aa17.68■□□□□ 0.42
VLDLR-202ENST00000382099 EGFL6Q8IUX8 553 aa17.68■□□□□ 0.42
VLDLR-202ENST00000382099 ADAM21Q9UKJ8 722 aa17.68■□□□□ 0.42
VLDLR-202ENST00000382099 USP16Q9Y5T5 823 aa17.68■□□□□ 0.42
VLDLR-202ENST00000382099 MROH2AA6NES4 1674 aa17.68■□□□□ 0.42
VLDLR-202ENST00000382099 ATAD2Q6PL18 1390 aa17.68■□□□□ 0.42
VLDLR-202ENST00000382099 DNAJC25Q9H1X3 360 aa17.68■□□□□ 0.42
VLDLR-202ENST00000382099 STX6O43752 255 aa17.68■□□□□ 0.42
VLDLR-202ENST00000382099 PPP2R5AQ15172 486 aa17.68■□□□□ 0.42
VLDLR-202ENST00000382099 DNAAF4Q8WXU2 420 aa17.68■□□□□ 0.42
VLDLR-202ENST00000382099 PPM1EQ8WY54 764 aa17.68■□□□□ 0.42
VLDLR-202ENST00000382099 RAD50Q92878 1312 aa17.67■□□□□ 0.42
VLDLR-202ENST00000382099 MCTP2Q6DN12 878 aa17.67■□□□□ 0.42
VLDLR-202ENST00000382099 FOXR1Q6PIV2 292 aa17.67■□□□□ 0.42
VLDLR-202ENST00000382099 NYAP1Q6ZVC0 841 aa17.67■□□□□ 0.42
VLDLR-202ENST00000382099 MICALL1Q8N3F8 863 aa17.67■□□□□ 0.42
VLDLR-202ENST00000382099 SMC3Q9UQE7 1217 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms