RNA–Protein interactions for RNA: ENST00000380875.7

FREM1-201, Transcript of FRAS1 related extracellular matrix 1, humanhuman

TSL 1 (best)

Gene FREM1, Length 6,126 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1-201ENST00000380875 CENPHQ9H3R5 247 aa10.77□□□□□ -0.69
FREM1-201ENST00000380875 TAF12Q16514 161 aa10.77□□□□□ -0.69
FREM1-201ENST00000380875 CATIPQ7Z7H3 387 aa10.77□□□□□ -0.69
FREM1-201ENST00000380875 RAB34Q9BZG1 259 aa10.77□□□□□ -0.69
FREM1-201ENST00000380875 CWC25Q9NXE8 425 aaPredicted RBP10.77□□□□□ -0.69
FREM1-201ENST00000380875 GPR162Q16538 588 aa10.77□□□□□ -0.69
FREM1-201ENST00000380875 CCDC191Q8NCU4 936 aa10.77□□□□□ -0.69
FREM1-201ENST00000380875 TSPY26PQ9H489 355 aa10.77□□□□□ -0.69
FREM1-201ENST00000380875 HYPKQ9NX55 129 aa10.77□□□□□ -0.69
FREM1-201ENST00000380875 NCAPD3P42695 1498 aa10.77□□□□□ -0.69
FREM1-201ENST00000380875 ATP5J2-PTCD1G3V325 749 aa10.76□□□□□ -0.69
FREM1-201ENST00000380875 AXDND1Q5T1B0 1012 aaPredicted RBP10.76□□□□□ -0.69
FREM1-201ENST00000380875 ZCRB1Q8TBF4 217 aaKnown RBP10.76□□□□□ -0.69
FREM1-201ENST00000380875 FAM135AQ9P2D6 1515 aa10.76□□□□□ -0.69
FREM1-201ENST00000380875 TSPY2A6NKD2 308 aa10.76□□□□□ -0.69
FREM1-201ENST00000380875 SMARCC1Q92922 1105 aaPredicted RBP10.76□□□□□ -0.69
FREM1-201ENST00000380875 RTCBQ9Y3I0 505 aaKnown RBP10.76□□□□□ -0.69
FREM1-201ENST00000380875 U3KPZ7 1027 aaPredicted RBP10.76□□□□□ -0.69
FREM1-201ENST00000380875 NCKAP5LQ9HCH0 1330 aa10.76□□□□□ -0.69
FREM1-201ENST00000380875 PRPF40AO75400 957 aaKnown RBP10.76□□□□□ -0.69
FREM1-201ENST00000380875 FCHSD2O94868 740 aa10.76□□□□□ -0.69
FREM1-201ENST00000380875 PDE4BQ07343 736 aa10.76□□□□□ -0.69
FREM1-201ENST00000380875 TAF4BQ92750 862 aa10.76□□□□□ -0.69
FREM1-201ENST00000380875 CCDC194A0A1B0GVG4 234 aa10.76□□□□□ -0.69
FREM1-201ENST00000380875 SYCP3Q8IZU3 236 aa10.76□□□□□ -0.69
FREM1-201ENST00000380875 SPC24Q8NBT2 197 aa10.76□□□□□ -0.69
FREM1-201ENST00000380875 SSRP1Q08945 709 aaKnown RBP10.76□□□□□ -0.69
FREM1-201ENST00000380875 GRIPAP1Q4V328 841 aa10.76□□□□□ -0.69
FREM1-201ENST00000380875 ZNF804AQ7Z570 1209 aa10.76□□□□□ -0.69
FREM1-201ENST00000380875 RNF41Q9H4P4 317 aaPredicted RBP10.76□□□□□ -0.69
FREM1-201ENST00000380875 TROQ12816 1431 aaPredicted RBP10.75□□□□□ -0.69
FREM1-201ENST00000380875 ZNF213O14771 459 aa10.75□□□□□ -0.69
FREM1-201ENST00000380875 ZNF397Q8NF99 534 aaPredicted RBP10.75□□□□□ -0.69
FREM1-201ENST00000380875 THUMPD2Q9BTF0 503 aaKnown RBP10.75□□□□□ -0.69
FREM1-201ENST00000380875 UTP14AQ9BVJ6 771 aaKnown RBP10.75□□□□□ -0.69
FREM1-201ENST00000380875 CCDC8Q9H0W5 538 aaPredicted RBP10.75□□□□□ -0.69
FREM1-201ENST00000380875 BRD4O60885 1362 aaPredicted RBP10.75□□□□□ -0.69
FREM1-201ENST00000380875 CASTP20810 708 aaKnown RBP10.75□□□□□ -0.69
FREM1-201ENST00000380875 RABEP1Q15276 862 aa10.75□□□□□ -0.69
FREM1-201ENST00000380875 EAPPQ56P03 285 aaPredicted RBP10.75□□□□□ -0.69
FREM1-201ENST00000380875 LDHAL6AQ6ZMR3 332 aa10.75□□□□□ -0.69
FREM1-201ENST00000380875 KIAA1328Q86T90 577 aa10.75□□□□□ -0.69
FREM1-201ENST00000380875 CTNNBL1Q8WYA6 563 aaPredicted RBP10.75□□□□□ -0.69
FREM1-201ENST00000380875 ARHGEF11O15085 1522 aa10.75□□□□□ -0.69
FREM1-201ENST00000380875 SPATA32Q96LK8 384 aa10.75□□□□□ -0.69
FREM1-201ENST00000380875 MAP3K2Q9Y2U5 619 aa10.75□□□□□ -0.69
FREM1-201ENST00000380875 WASLO00401 505 aaPredicted RBP10.75□□□□□ -0.69
FREM1-201ENST00000380875 IFIT3O14879 490 aaKnown RBP10.75□□□□□ -0.69
FREM1-201ENST00000380875 CBFA2T2O43439 604 aa10.75□□□□□ -0.69
FREM1-201ENST00000380875 HMGN5P82970 282 aaKnown RBP10.75□□□□□ -0.69
FREM1-201ENST00000380875 CAVIN1Q6NZI2 390 aaKnown RBP10.75□□□□□ -0.69
FREM1-201ENST00000380875 ZNF710Q8N1W2 664 aa10.75□□□□□ -0.69
FREM1-201ENST00000380875 TNRQ92752 1358 aa10.74□□□□□ -0.69
FREM1-201ENST00000380875 CDCA7LQ96GN5 454 aa10.74□□□□□ -0.69
FREM1-201ENST00000380875 CRNKL1Q9BZJ0 848 aaKnown RBP10.74□□□□□ -0.69
FREM1-201ENST00000380875 KIAA1107Q9UPP5 1409 aa10.74□□□□□ -0.69
FREM1-201ENST00000380875 DENND4BO75064 1496 aaPredicted RBP10.74□□□□□ -0.69
FREM1-201ENST00000380875 FAM177A1Q8N128 213 aaPredicted RBP10.74□□□□□ -0.69
FREM1-201ENST00000380875 JARID2Q92833 1246 aaPredicted RBP10.74□□□□□ -0.69
FREM1-201ENST00000380875 NYXQ9GZU5 481 aa10.74□□□□□ -0.69
FREM1-201ENST00000380875 SSX2IPQ9Y2D8 614 aa10.74□□□□□ -0.69
FREM1-201ENST00000380875 TOPBP1Q92547 1522 aa10.74□□□□□ -0.69
FREM1-201ENST00000380875 CCDC196A0A1B0GTZ2 297 aa10.74□□□□□ -0.69
FREM1-201ENST00000380875 GOLGA8AA7E2F4 631 aa10.74□□□□□ -0.69
FREM1-201ENST00000380875 GOLGA8BA8MQT2 603 aa10.74□□□□□ -0.69
FREM1-201ENST00000380875 NIP7Q9Y221 180 aaKnown RBP eCLIP10.74□□□□□ -0.69
FREM1-201ENST00000380875 MACROD2A1Z1Q3 448 aa10.74□□□□□ -0.69
FREM1-201ENST00000380875 CTNNA2P26232 953 aa10.74□□□□□ -0.69
FREM1-201ENST00000380875 TTF1Q15361 905 aaPredicted RBP10.74□□□□□ -0.69
FREM1-201ENST00000380875 CCDC144CPQ8IYA2 1237 aa10.74□□□□□ -0.69
FREM1-201ENST00000380875 SYNJ1O43426 1573 aa10.74□□□□□ -0.69
FREM1-201ENST00000380875 KIF20AO95235 890 aa10.74□□□□□ -0.69
FREM1-201ENST00000380875 TSPY3P0CV98 308 aa10.74□□□□□ -0.69
FREM1-201ENST00000380875 TSPY8P0CW00 308 aa10.74□□□□□ -0.69
FREM1-201ENST00000380875 TNNT1P13805 278 aa10.74□□□□□ -0.69
FREM1-201ENST00000380875 EP400NLQ6ZTU2 488 aa10.74□□□□□ -0.69
FREM1-201ENST00000380875 NLRP3Q96P20 1036 aa10.74□□□□□ -0.69
FREM1-201ENST00000380875 NOD1Q9Y239 953 aa10.74□□□□□ -0.69
FREM1-201ENST00000380875 EXOC6BQ9Y2D4 811 aa10.74□□□□□ -0.69
FREM1-201ENST00000380875 NPHP3Q7Z494 1330 aa10.73□□□□□ -0.69
FREM1-201ENST00000380875 CCDC12Q8WUD4 166 aaPredicted RBP10.73□□□□□ -0.69
FREM1-201ENST00000380875 USP8P40818 1118 aa10.73□□□□□ -0.69
FREM1-201ENST00000380875 KRT85P78386 507 aa10.73□□□□□ -0.69
FREM1-201ENST00000380875 KIF1BPQ96EK5 621 aa10.73□□□□□ -0.69
FREM1-201ENST00000380875 MMRN2Q9H8L6 949 aa10.73□□□□□ -0.69
FREM1-201ENST00000380875 NCBP1Q09161 790 aaKnown RBP10.73□□□□□ -0.69
FREM1-201ENST00000380875 CABLES1Q8TDN4 633 aa10.73□□□□□ -0.69
FREM1-201ENST00000380875 DAPK1P53355 1430 aa10.73□□□□□ -0.69
FREM1-201ENST00000380875 H0YHG0 523 aa10.72□□□□□ -0.69
FREM1-201ENST00000380875 CT47B1P0C2W7 299 aaPredicted RBP10.72□□□□□ -0.69
FREM1-201ENST00000380875 KIF14Q15058 1648 aa10.72□□□□□ -0.69
FREM1-201ENST00000380875 FKBP15Q5T1M5 1219 aa10.72□□□□□ -0.69
FREM1-201ENST00000380875 WDR63Q8IWG1 891 aa10.72□□□□□ -0.69
FREM1-201ENST00000380875 B4DLN1 442 aa10.72□□□□□ -0.69
FREM1-201ENST00000380875 RAB11FIP3O75154 756 aa10.72□□□□□ -0.69
FREM1-201ENST00000380875 MRPL12P52815 198 aaKnown RBP10.72□□□□□ -0.69
FREM1-201ENST00000380875 FAM193AP78312 1265 aa10.72□□□□□ -0.69
FREM1-201ENST00000380875 MVPQ14764 893 aaKnown RBP10.72□□□□□ -0.69
FREM1-201ENST00000380875 CACNA2D4Q7Z3S7 1137 aa10.72□□□□□ -0.69
FREM1-201ENST00000380875 DNAAF4Q8WXU2 420 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms