RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 BIN1O00499 593 aa14.42□□□□□ -0.1
CHD3-203ENST00000380358 MXRA7P84157 204 aa14.42□□□□□ -0.1
CHD3-203ENST00000380358 ANKRD1Q15327 319 aa14.42□□□□□ -0.1
CHD3-203ENST00000380358 ABCC8Q09428 1581 aa14.41□□□□□ -0.1
CHD3-203ENST00000380358 MIA2Q96PC5 1412 aa14.41□□□□□ -0.1
CHD3-203ENST00000380358 KIF4BQ2VIQ3 1234 aa14.41□□□□□ -0.1
CHD3-203ENST00000380358 TMOD3Q9NYL9 352 aa14.41□□□□□ -0.1
CHD3-203ENST00000380358 URI1O94763 535 aaPredicted RBP14.41□□□□□ -0.1
CHD3-203ENST00000380358 STARD3NLO95772 234 aa14.41□□□□□ -0.1
CHD3-203ENST00000380358 CCDC63Q8NA47 563 aa14.41□□□□□ -0.1
CHD3-203ENST00000380358 RNF216Q9NWF9 866 aaPredicted RBP14.41□□□□□ -0.1
CHD3-203ENST00000380358 OSCARQ8IYS5 282 aa14.41□□□□□ -0.1
CHD3-203ENST00000380358 ZSWIM4Q9H7M6 989 aa14.41□□□□□ -0.1
CHD3-203ENST00000380358 ZBTB21Q9ULJ3 1066 aa14.41□□□□□ -0.1
CHD3-203ENST00000380358 CDK19Q9BWU1 502 aa14.4□□□□□ -0.1
CHD3-203ENST00000380358 HSP90AA4PQ58FG1 418 aa14.4□□□□□ -0.1
CHD3-203ENST00000380358 SPATA24Q86W54 205 aa14.4□□□□□ -0.1
CHD3-203ENST00000380358 ZNF408Q9H9D4 720 aa14.4□□□□□ -0.1
CHD3-203ENST00000380358 EXOC6BQ9Y2D4 811 aa14.4□□□□□ -0.1
CHD3-203ENST00000380358 MAATS1Q7Z4T9 603 aa14.4□□□□□ -0.1
CHD3-203ENST00000380358 MBD3O95983 291 aa14.39□□□□□ -0.11
CHD3-203ENST00000380358 MTIF2P46199 727 aaKnown RBP14.39□□□□□ -0.11
CHD3-203ENST00000380358 CABP1Q9NZU7 370 aa14.39□□□□□ -0.11
CHD3-203ENST00000380358 CEP131Q9UPN4 1083 aa14.39□□□□□ -0.11
CHD3-203ENST00000380358 GCOM1H8Y6P7 765 aaPredicted RBP14.39□□□□□ -0.11
CHD3-203ENST00000380358 CSPG5O95196 566 aa14.39□□□□□ -0.11
CHD3-203ENST00000380358 MYZAPP0CAP1 466 aa14.39□□□□□ -0.11
CHD3-203ENST00000380358 CCDC8Q9H0W5 538 aaPredicted RBP14.39□□□□□ -0.11
CHD3-203ENST00000380358 SHTN1A0MZ66 631 aa14.39□□□□□ -0.11
CHD3-203ENST00000380358 CCDC40Q4G0X9 1142 aa14.39□□□□□ -0.11
CHD3-203ENST00000380358 CCDC18Q5T9S5 1454 aa14.39□□□□□ -0.11
CHD3-203ENST00000380358 A0A1W2PRG0 241 aa14.39□□□□□ -0.11
CHD3-203ENST00000380358 PHACTR2O75167 634 aa14.38□□□□□ -0.11
CHD3-203ENST00000380358 TRMT112Q9UI30 125 aaKnown RBP14.38□□□□□ -0.11
CHD3-203ENST00000380358 ZNF652Q9Y2D9 606 aa14.38□□□□□ -0.11
CHD3-203ENST00000380358 FSD2A1L4K1 749 aa14.38□□□□□ -0.11
CHD3-203ENST00000380358 PICALMQ13492 652 aa14.38□□□□□ -0.11
CHD3-203ENST00000380358 SYCE3A1L190 88 aa14.38□□□□□ -0.11
CHD3-203ENST00000380358 ANKRD18BA2A2Z9 1011 aa14.38□□□□□ -0.11
CHD3-203ENST00000380358 TMEM266Q2M3C6 531 aa14.38□□□□□ -0.11
CHD3-203ENST00000380358 GIGYF2Q6Y7W6 1299 aaKnown RBP14.38□□□□□ -0.11
CHD3-203ENST00000380358 VPS36Q86VN1 386 aa14.38□□□□□ -0.11
CHD3-203ENST00000380358 BIRC2Q13490 618 aa14.37□□□□□ -0.11
CHD3-203ENST00000380358 IKBKGQ9Y6K9 419 aa14.37□□□□□ -0.11
CHD3-203ENST00000380358 PRPF40BQ6NWY9 871 aaKnown RBP14.37□□□□□ -0.11
CHD3-203ENST00000380358 IFIT1P09914 478 aaKnown RBP14.37□□□□□ -0.11
CHD3-203ENST00000380358 PPP2R5CQ13362 524 aa14.37□□□□□ -0.11
CHD3-203ENST00000380358 UBXN4Q92575 508 aa14.37□□□□□ -0.11
CHD3-203ENST00000380358 IQSEC3Q9UPP2 1182 aaPredicted RBP14.37□□□□□ -0.11
CHD3-203ENST00000380358 HAND2P61296 217 aa14.37□□□□□ -0.11
CHD3-203ENST00000380358 BBXQ8WY36 941 aaPredicted RBP14.37□□□□□ -0.11
CHD3-203ENST00000380358 UTP14AQ9BVJ6 771 aaKnown RBP14.37□□□□□ -0.11
CHD3-203ENST00000380358 CTCFLQ8NI51 663 aaPredicted RBP14.37□□□□□ -0.11
CHD3-203ENST00000380358 CTNNA3Q9UI47 895 aa14.37□□□□□ -0.11
CHD3-203ENST00000380358 FAM170AA1A519 330 aa14.36□□□□□ -0.11
CHD3-203ENST00000380358 SMTNL1A8MU46 457 aa14.36□□□□□ -0.11
CHD3-203ENST00000380358 CFAP70Q5T0N1 1121 aa14.36□□□□□ -0.11
CHD3-203ENST00000380358 IL27Q8NEV9 243 aa14.36□□□□□ -0.11
CHD3-203ENST00000380358 ZNF287Q9HBT7 754 aa14.36□□□□□ -0.11
CHD3-203ENST00000380358 SLC12A7Q9Y666 1083 aa14.36□□□□□ -0.11
CHD3-203ENST00000380358 WDR33Q9C0J8 1336 aaKnown RBP14.36□□□□□ -0.11
CHD3-203ENST00000380358 FLIIQ13045 1269 aa14.36□□□□□ -0.11
CHD3-203ENST00000380358 WASF1Q92558 559 aa14.36□□□□□ -0.11
CHD3-203ENST00000380358 ACSBG1Q96GR2 724 aa14.36□□□□□ -0.11
CHD3-203ENST00000380358 SNRKQ9NRH2 765 aa14.36□□□□□ -0.11
CHD3-203ENST00000380358 CNTLNQ9NXG0 1405 aa14.36□□□□□ -0.11
CHD3-203ENST00000380358 IFIT3O14879 490 aaKnown RBP14.36□□□□□ -0.11
CHD3-203ENST00000380358 IRX5P78411 483 aaPredicted RBP14.36□□□□□ -0.11
CHD3-203ENST00000380358 CCDC194A0A1B0GVG4 234 aa14.35□□□□□ -0.11
CHD3-203ENST00000380358 TTC36A6NLP5 189 aa14.35□□□□□ -0.11
CHD3-203ENST00000380358 KIF5CO60282 957 aa14.35□□□□□ -0.11
CHD3-203ENST00000380358 MRVI1Q9Y6F6 885 aa14.35□□□□□ -0.11
CHD3-203ENST00000380358 SMIM23A6NLE4 172 aa14.35□□□□□ -0.11
CHD3-203ENST00000380358 VEZTQ9HBM0 779 aa14.35□□□□□ -0.11
CHD3-203ENST00000380358 BAG4O95429 457 aaKnown RBP14.35□□□□□ -0.11
CHD3-203ENST00000380358 TPD52P55327 224 aaPredicted RBP14.35□□□□□ -0.11
CHD3-203ENST00000380358 ARID5AQ03989 594 aa14.35□□□□□ -0.11
CHD3-203ENST00000380358 ODF2LQ9ULJ1 636 aa14.35□□□□□ -0.11
CHD3-203ENST00000380358 CCDC175P0C221 793 aa14.35□□□□□ -0.11
CHD3-203ENST00000380358 SSRP1Q08945 709 aaKnown RBP14.35□□□□□ -0.11
CHD3-203ENST00000380358 ZBED9Q6R2W3 1325 aa14.35□□□□□ -0.11
CHD3-203ENST00000380358 PPARDQ03181 441 aa14.35□□□□□ -0.11
CHD3-203ENST00000380358 THUMPD2Q9BTF0 503 aaKnown RBP14.35□□□□□ -0.11
CHD3-203ENST00000380358 ACTN2P35609 894 aa14.34□□□□□ -0.11
CHD3-203ENST00000380358 MCM10Q7L590 875 aa14.34□□□□□ -0.11
CHD3-203ENST00000380358 EHMT1Q9H9B1 1298 aa14.34□□□□□ -0.11
CHD3-203ENST00000380358 ZBTB3Q9H5J0 574 aa14.34□□□□□ -0.11
CHD3-203ENST00000380358 TOP1P11387 765 aaKnown RBP14.34□□□□□ -0.11
CHD3-203ENST00000380358 CCT4P50991 539 aaKnown RBP14.34□□□□□ -0.11
CHD3-203ENST00000380358 CCDC174Q6PII3 467 aa14.34□□□□□ -0.11
CHD3-203ENST00000380358 HAUS7Q99871 368 aa14.34□□□□□ -0.11
CHD3-203ENST00000380358 TCHPQ9BT92 498 aa14.34□□□□□ -0.11
CHD3-203ENST00000380358 SLC12A5Q9H2X9 1139 aa14.34□□□□□ -0.11
CHD3-203ENST00000380358 K7ELQ4 463 aaPredicted RBP14.34□□□□□ -0.11
CHD3-203ENST00000380358 ATF7IPQ6VMQ6 1270 aa14.34□□□□□ -0.11
CHD3-203ENST00000380358 CNNM3Q8NE01 707 aa14.33□□□□□ -0.12
CHD3-203ENST00000380358 CABP5Q9NP86 173 aa14.33□□□□□ -0.12
CHD3-203ENST00000380358 JADE2Q9NQC1 790 aa14.33□□□□□ -0.12
CHD3-203ENST00000380358 EEF2P13639 858 aaKnown RBP14.33□□□□□ -0.12
CHD3-203ENST00000380358 TSPY2A6NKD2 308 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms