RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 GOLIM4O00461 696 aa11.1□□□□□ -0.63
SNX1-202ENST00000380285 MPHOSPH8Q99549 860 aa11.1□□□□□ -0.63
SNX1-202ENST00000380285 CCDC175P0C221 793 aa11.09□□□□□ -0.63
SNX1-202ENST00000380285 CAMK4Q16566 473 aa11.09□□□□□ -0.63
SNX1-202ENST00000380285 NUP133Q8WUM0 1156 aa11.09□□□□□ -0.63
SNX1-202ENST00000380285 DNAAF4Q8WXU2 420 aa11.09□□□□□ -0.63
SNX1-202ENST00000380285 EVI5LQ96CN4 794 aa11.09□□□□□ -0.63
SNX1-202ENST00000380285 SSFA2P28290 1259 aa11.09□□□□□ -0.63
SNX1-202ENST00000380285 IFFO1Q0D2I5 559 aa11.09□□□□□ -0.63
SNX1-202ENST00000380285 ZNF530Q6P9A1 599 aaPredicted RBP11.09□□□□□ -0.63
SNX1-202ENST00000380285 C16orf45Q96MC5 204 aaPredicted RBP11.09□□□□□ -0.63
SNX1-202ENST00000380285 USP25Q9UHP3 1055 aa11.09□□□□□ -0.63
SNX1-202ENST00000380285 EIF2AK4Q9P2K8 1649 aaKnown RBP11.09□□□□□ -0.63
SNX1-202ENST00000380285 IFI16Q16666 785 aaKnown RBP11.09□□□□□ -0.63
SNX1-202ENST00000380285 SSH1Q8WYL5 1049 aa11.09□□□□□ -0.63
SNX1-202ENST00000380285 LARP1Q6PKG0 1096 aaKnown RBP11.09□□□□□ -0.63
SNX1-202ENST00000380285 RBM25P49756 843 aaKnown RBP11.09□□□□□ -0.63
SNX1-202ENST00000380285 ZSCAN23Q3MJ62 389 aa11.09□□□□□ -0.63
SNX1-202ENST00000380285 CTAGE1Q96RT6 745 aa11.09□□□□□ -0.63
SNX1-202ENST00000380285 THOC2Q8NI27 1593 aaKnown RBP11.08□□□□□ -0.63
SNX1-202ENST00000380285 CAMSAP2Q08AD1 1489 aa11.08□□□□□ -0.64
SNX1-202ENST00000380285 BTBD11A6QL63 1104 aa11.08□□□□□ -0.64
SNX1-202ENST00000380285 BBXQ8WY36 941 aaPredicted RBP11.08□□□□□ -0.64
SNX1-202ENST00000380285 ARHGAP45Q92619 1136 aa11.08□□□□□ -0.64
SNX1-202ENST00000380285 RNF41Q9H4P4 317 aaPredicted RBP11.08□□□□□ -0.64
SNX1-202ENST00000380285 CABP1Q9NZU7 370 aa11.08□□□□□ -0.64
SNX1-202ENST00000380285 ITSN2Q9NZM3 1697 aa11.08□□□□□ -0.64
SNX1-202ENST00000380285 CABP4P57796 275 aa11.08□□□□□ -0.64
SNX1-202ENST00000380285 FKBP4Q02790 459 aaKnown RBP eCLIP11.08□□□□□ -0.64
SNX1-202ENST00000380285 CACNA2D4Q7Z3S7 1137 aa11.08□□□□□ -0.64
SNX1-202ENST00000380285 STAMBPO95630 424 aa11.08□□□□□ -0.64
SNX1-202ENST00000380285 ZNF165P49910 485 aa11.08□□□□□ -0.64
SNX1-202ENST00000380285 TMEM132AQ24JP5 1023 aa11.08□□□□□ -0.64
SNX1-202ENST00000380285 AIDAQ96BJ3 306 aa11.08□□□□□ -0.64
SNX1-202ENST00000380285 ARFGAP3Q9NP61 516 aa11.08□□□□□ -0.64
SNX1-202ENST00000380285 DUSP27Q5VZP5 1158 aa11.08□□□□□ -0.64
SNX1-202ENST00000380285 CNNM3Q8NE01 707 aa11.08□□□□□ -0.64
SNX1-202ENST00000380285 NUP88Q99567 741 aaPredicted RBP11.08□□□□□ -0.64
SNX1-202ENST00000380285 SCAF11Q99590 1463 aaKnown RBP11.08□□□□□ -0.64
SNX1-202ENST00000380285 AMPD3Q01432 767 aa11.07□□□□□ -0.64
SNX1-202ENST00000380285 SIL1Q9H173 461 aa11.07□□□□□ -0.64
SNX1-202ENST00000380285 BMP15O95972 392 aa11.07□□□□□ -0.64
SNX1-202ENST00000380285 PRPF40BQ6NWY9 871 aaKnown RBP11.07□□□□□ -0.64
SNX1-202ENST00000380285 LRRC27Q9C0I9 530 aa11.07□□□□□ -0.64
SNX1-202ENST00000380285 TBC1D9Q6ZT07 1266 aa11.07□□□□□ -0.64
SNX1-202ENST00000380285 ZKSCAN5Q9Y2L8 839 aa11.07□□□□□ -0.64
SNX1-202ENST00000380285 MAP4K4O95819 1239 aaPredicted RBP11.07□□□□□ -0.64
SNX1-202ENST00000380285 CCDC184Q52MB2 194 aa11.07□□□□□ -0.64
SNX1-202ENST00000380285 MPNDQ8N594 471 aa11.07□□□□□ -0.64
SNX1-202ENST00000380285 SEC63Q9UGP8 760 aaKnown RBP11.07□□□□□ -0.64
SNX1-202ENST00000380285 FEZ1Q99689 392 aa11.06□□□□□ -0.64
SNX1-202ENST00000380285 NF2P35240 595 aa11.06□□□□□ -0.64
SNX1-202ENST00000380285 ZHX3Q9H4I2 956 aa11.06□□□□□ -0.64
SNX1-202ENST00000380285 A0A087WZG4 1122 aa11.06□□□□□ -0.64
SNX1-202ENST00000380285 TMEM266Q2M3C6 531 aa11.06□□□□□ -0.64
SNX1-202ENST00000380285 FSIP1Q8NA03 581 aa11.06□□□□□ -0.64
SNX1-202ENST00000380285 KAT6BQ8WYB5 2073 aa11.06□□□□□ -0.64
SNX1-202ENST00000380285 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.06□□□□□ -0.64
SNX1-202ENST00000380285 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.06□□□□□ -0.645e-7■■□□□ 13.4
SNX1-202ENST00000380285 OSCARQ8IYS5 282 aa11.06□□□□□ -0.64
SNX1-202ENST00000380285 FAM200AQ8TCP9 573 aa11.06□□□□□ -0.64
SNX1-202ENST00000380285 KCNH5Q8NCM2 988 aa11.06□□□□□ -0.64
SNX1-202ENST00000380285 SEPT11Q9NVA2 429 aaKnown RBP11.06□□□□□ -0.64
SNX1-202ENST00000380285 RMND1Q9NWS8 449 aa11.06□□□□□ -0.64
SNX1-202ENST00000380285 EXOC6BQ9Y2D4 811 aa11.05□□□□□ -0.64
SNX1-202ENST00000380285 V9GYY5 206 aaPredicted RBP11.05□□□□□ -0.64
SNX1-202ENST00000380285 TOPBP1Q92547 1522 aa11.05□□□□□ -0.64
SNX1-202ENST00000380285 AMOTQ4VCS5 1084 aa11.05□□□□□ -0.64
SNX1-202ENST00000380285 TTC22Q5TAA0 569 aa11.05□□□□□ -0.64
SNX1-202ENST00000380285 CEP112Q8N8E3 955 aa11.05□□□□□ -0.64
SNX1-202ENST00000380285 NOLC1Q14978 699 aaKnown RBP eCLIP11.05□□□□□ -0.64
SNX1-202ENST00000380285 TNIP1Q15025 636 aa11.05□□□□□ -0.64
SNX1-202ENST00000380285 IL1RAPL2Q9NP60 686 aa11.05□□□□□ -0.64
SNX1-202ENST00000380285 SSRP1Q08945 709 aaKnown RBP11.05□□□□□ -0.64
SNX1-202ENST00000380285 TMC6Q7Z403 805 aa11.05□□□□□ -0.64
SNX1-202ENST00000380285 SPATA24Q86W54 205 aa11.05□□□□□ -0.64
SNX1-202ENST00000380285 MRC2Q9UBG0 1479 aa11.05□□□□□ -0.64
SNX1-202ENST00000380285 ASXL1Q8IXJ9 1541 aa11.05□□□□□ -0.64
SNX1-202ENST00000380285 NUCB1Q02818 461 aa11.05□□□□□ -0.64
SNX1-202ENST00000380285 CCDC12Q8WUD4 166 aaPredicted RBP11.05□□□□□ -0.64
SNX1-202ENST00000380285 PIP4K2BP78356 416 aa11.05□□□□□ -0.64
SNX1-202ENST00000380285 SPAG1Q07617 926 aa11.05□□□□□ -0.64
SNX1-202ENST00000380285 CETN1Q12798 172 aa11.05□□□□□ -0.64
SNX1-202ENST00000380285 HSF2BPO75031 334 aa11.04□□□□□ -0.64
SNX1-202ENST00000380285 ZSCAN22P10073 491 aaPredicted RBP11.04□□□□□ -0.64
SNX1-202ENST00000380285 PRG4Q92954 1404 aaPredicted RBP11.04□□□□□ -0.64
SNX1-202ENST00000380285 CCDC94Q9BW85 323 aaPredicted RBP11.04□□□□□ -0.64
SNX1-202ENST00000380285 HYPKQ9NX55 129 aa11.04□□□□□ -0.64
SNX1-202ENST00000380285 RAI14Q9P0K7 980 aa11.04□□□□□ -0.64
SNX1-202ENST00000380285 TTC21BQ7Z4L5 1316 aa11.04□□□□□ -0.64
SNX1-202ENST00000380285 GTF2F1P35269 517 aaKnown RBP eCLIP11.04□□□□□ -0.64
SNX1-202ENST00000380285 PPM1EQ8WY54 764 aa11.04□□□□□ -0.64
SNX1-202ENST00000380285 NSRP1Q9H0G5 558 aaKnown RBP11.04□□□□□ -0.64
SNX1-202ENST00000380285 CCDC172P0C7W6 258 aa11.04□□□□□ -0.64
SNX1-202ENST00000380285 TRIM27P14373 513 aa11.04□□□□□ -0.64
SNX1-202ENST00000380285 GJB2P29033 226 aa11.04□□□□□ -0.64
SNX1-202ENST00000380285 C6orf163Q5TEZ5 329 aa11.04□□□□□ -0.64
SNX1-202ENST00000380285 CTCFLQ8NI51 663 aaPredicted RBP11.04□□□□□ -0.64
SNX1-202ENST00000380285 KCNG4Q8TDN1 519 aa11.04□□□□□ -0.64
SNX1-202ENST00000380285 TAF7Q15545 349 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms