RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 ZNF526Q8TF50 670 aaPredicted RBP19.76■□□□□ 0.75
HDAC6-204ENST00000376643 POLRMTO00411 1230 aaKnown RBP19.75■□□□□ 0.75
HDAC6-204ENST00000376643 TM4SF1P30408 202 aa19.75■□□□□ 0.75
HDAC6-204ENST00000376643 KIAA1551Q9HCM1 1747 aa19.75■□□□□ 0.75
HDAC6-204ENST00000376643 DDR1Q08345 913 aa19.74■□□□□ 0.75
HDAC6-204ENST00000376643 ZBTB1Q9Y2K1 713 aa19.74■□□□□ 0.75
HDAC6-204ENST00000376643 N4BP2Q86UW6 1770 aaPredicted RBP19.74■□□□□ 0.75
HDAC6-204ENST00000376643 CNGB1Q14028 1251 aaPredicted RBP19.73■□□□□ 0.75
HDAC6-204ENST00000376643 ZNF790Q6PG37 636 aa19.73■□□□□ 0.75
HDAC6-204ENST00000376643 FMNL2Q96PY5 1086 aa19.73■□□□□ 0.75
HDAC6-204ENST00000376643 PDZRN3Q9UPQ7 1066 aa19.72■□□□□ 0.75
HDAC6-204ENST00000376643 UBR2Q8IWV8 1755 aa19.72■□□□□ 0.75
HDAC6-204ENST00000376643 VIRMAQ69YN4 1812 aaKnown RBP19.72■□□□□ 0.75
HDAC6-204ENST00000376643 HEG1Q9ULI3 1381 aa19.71■□□□□ 0.75
HDAC6-204ENST00000376643 CANXP27824 592 aaKnown RBP19.71■□□□□ 0.75
HDAC6-204ENST00000376643 RTF1Q92541 710 aaKnown RBP19.71■□□□□ 0.75
HDAC6-204ENST00000376643 NEFMP07197 916 aa19.7■□□□□ 0.74
HDAC6-204ENST00000376643 KCNA3P22001 575 aa19.7■□□□□ 0.74
HDAC6-204ENST00000376643 PRKAR2BP31323 418 aa19.7■□□□□ 0.74
HDAC6-204ENST00000376643 NFIXQ14938 502 aa19.7■□□□□ 0.74
HDAC6-204ENST00000376643 IL17REQ8NFR9 667 aa19.7■□□□□ 0.74
HDAC6-204ENST00000376643 CEMIPQ8WUJ3 1361 aa19.7■□□□□ 0.74
HDAC6-204ENST00000376643 ARFGEF1Q9Y6D6 1849 aa19.69■□□□□ 0.74
HDAC6-204ENST00000376643 BRCA1P38398 1863 aaKnown RBP19.69■□□□□ 0.74
HDAC6-204ENST00000376643 HSPA6P17066 643 aa19.69■□□□□ 0.74
HDAC6-204ENST00000376643 EIF5P55010 431 aaKnown RBP19.69■□□□□ 0.74
HDAC6-204ENST00000376643 ZNF496Q96IT1 587 aaPredicted RBP19.69■□□□□ 0.74
HDAC6-204ENST00000376643 U2AF1L5P0DN76 240 aaPredicted RBP19.68■□□□□ 0.74
HDAC6-204ENST00000376643 IL6STP40189 918 aaPredicted RBP19.68■□□□□ 0.74
HDAC6-204ENST00000376643 U2AF1Q01081 240 aaKnown RBP eCLIP19.68■□□□□ 0.74
HDAC6-204ENST00000376643 RSPH6AQ9H0K4 717 aa19.68■□□□□ 0.74
HDAC6-204ENST00000376643 BTBD11A6QL63 1104 aa19.67■□□□□ 0.74
HDAC6-204ENST00000376643 SERPINB2P05120 415 aa19.67■□□□□ 0.74
HDAC6-204ENST00000376643 C9orf131Q5VYM1 1079 aa19.67■□□□□ 0.74
HDAC6-204ENST00000376643 KDM2BQ8NHM5 1336 aa19.67■□□□□ 0.74
HDAC6-204ENST00000376643 ZC3H4Q9UPT8 1303 aaKnown RBP19.67■□□□□ 0.74
HDAC6-204ENST00000376643 KIF3CO14782 793 aa19.66■□□□□ 0.74
HDAC6-204ENST00000376643 HTATSF1O43719 755 aaKnown RBP19.66■□□□□ 0.74
HDAC6-204ENST00000376643 TOMM70O94826 608 aa19.66■□□□□ 0.74
HDAC6-204ENST00000376643 PPP2R1AP30153 589 aa19.66■□□□□ 0.74
HDAC6-204ENST00000376643 H0YIN7 160 aa19.65■□□□□ 0.74
HDAC6-204ENST00000376643 CHRNA5P30532 468 aa19.65■□□□□ 0.74
HDAC6-204ENST00000376643 C16orf71Q8IYS4 520 aaPredicted RBP19.65■□□□□ 0.74
HDAC6-204ENST00000376643 TTLL6Q8N841 843 aa19.64■□□□□ 0.73
HDAC6-204ENST00000376643 BCL2L12Q9HB09 334 aa19.64■□□□□ 0.73
HDAC6-204ENST00000376643 RNF181Q9P0P0 153 aa19.64■□□□□ 0.73
HDAC6-204ENST00000376643 ZNF330Q9Y3S2 320 aaPredicted RBP19.64■□□□□ 0.73
HDAC6-204ENST00000376643 CARMIL3Q8ND23 1372 aa19.64■□□□□ 0.73
HDAC6-204ENST00000376643 NRXN2Q9P2S2 1712 aa19.64■□□□□ 0.73
HDAC6-204ENST00000376643 PDE6BP35913 854 aa19.63■□□□□ 0.73
HDAC6-204ENST00000376643 PHACTR3Q96KR7 559 aa19.63■□□□□ 0.73
HDAC6-204ENST00000376643 SIPA1L3O60292 1781 aaPredicted RBP19.62■□□□□ 0.73
HDAC6-204ENST00000376643 NPHP1O15259 732 aa19.62■□□□□ 0.73
HDAC6-204ENST00000376643 C2CD5Q86YS7 1000 aa19.62■□□□□ 0.73
HDAC6-204ENST00000376643 PNNQ9H307 717 aaKnown RBP19.62■□□□□ 0.73
HDAC6-204ENST00000376643 SNRPA1P09661 255 aaKnown RBP19.61■□□□□ 0.73
HDAC6-204ENST00000376643 APLP1P51693 650 aa19.61■□□□□ 0.73
HDAC6-204ENST00000376643 SETDB2Q96T68 719 aa19.61■□□□□ 0.73
HDAC6-204ENST00000376643 BRIP1Q9BX63 1249 aa19.61■□□□□ 0.73
HDAC6-204ENST00000376643 ZNF652Q9Y2D9 606 aa19.61■□□□□ 0.73
HDAC6-204ENST00000376643 SCN7AQ01118 1682 aa19.6■□□□□ 0.73
HDAC6-204ENST00000376643 RGL2O15211 777 aa19.6■□□□□ 0.73
HDAC6-204ENST00000376643 BICDL1Q6ZP65 573 aa19.6■□□□□ 0.73
HDAC6-204ENST00000376643 ST5P78524 1137 aa19.59■□□□□ 0.73
HDAC6-204ENST00000376643 RBM46Q8TBY0 533 aaKnown RBP19.59■□□□□ 0.73
HDAC6-204ENST00000376643 AFDNP55196 1824 aaKnown RBP19.59■□□□□ 0.73
HDAC6-204ENST00000376643 LMNB1P20700 586 aa19.58■□□□□ 0.72
HDAC6-204ENST00000376643 TBC1D9BQ66K14 1250 aa19.58■□□□□ 0.72
HDAC6-204ENST00000376643 CLEC4GQ6UXB4 293 aa19.58■□□□□ 0.72
HDAC6-204ENST00000376643 DZIP3Q86Y13 1208 aaKnown RBP19.58■□□□□ 0.72
HDAC6-204ENST00000376643 CNBD1Q8NA66 436 aa19.58■□□□□ 0.72
HDAC6-204ENST00000376643 PNISRQ8TF01 805 aaKnown RBP19.58■□□□□ 0.72
HDAC6-204ENST00000376643 TBC1D2BQ9UPU7 963 aa19.58■□□□□ 0.72
HDAC6-204ENST00000376643 DLEC1Q9Y238 1755 aa19.57■□□□□ 0.72
HDAC6-204ENST00000376643 A1BGP04217 495 aa19.57■□□□□ 0.72
HDAC6-204ENST00000376643 FSTL1Q12841 308 aa19.57■□□□□ 0.72
HDAC6-204ENST00000376643 NMRK2Q9NPI5 230 aa19.57■□□□□ 0.72
HDAC6-204ENST00000376643 SOGA3Q5TF21 947 aa19.56■□□□□ 0.72
HDAC6-204ENST00000376643 MCM10Q7L590 875 aa19.56■□□□□ 0.72
HDAC6-204ENST00000376643 CAMTA2O94983 1202 aa19.55■□□□□ 0.72
HDAC6-204ENST00000376643 TAF7Q15545 349 aaPredicted RBP19.55■□□□□ 0.72
HDAC6-204ENST00000376643 PRR5LQ6MZQ0 368 aa19.55■□□□□ 0.72
HDAC6-204ENST00000376643 CNKSR1Q969H4 720 aa19.55■□□□□ 0.72
HDAC6-204ENST00000376643 ZNF622Q969S3 477 aaKnown RBP eCLIP19.55■□□□□ 0.721e-7■□□□□ 10.9
HDAC6-204ENST00000376643 TNRC6CQ9HCJ0 1690 aaKnown RBP19.53■□□□□ 0.72
HDAC6-204ENST00000376643 KCNQ3O43525 872 aa19.53■□□□□ 0.72
HDAC6-204ENST00000376643 STYK1Q6J9G0 422 aa19.53■□□□□ 0.72
HDAC6-204ENST00000376643 USP16Q9Y5T5 823 aa19.53■□□□□ 0.72
HDAC6-204ENST00000376643 MAPK8IP3Q9UPT6 1336 aa19.52■□□□□ 0.72
HDAC6-204ENST00000376643 RASSF7Q02833 373 aa19.52■□□□□ 0.72
HDAC6-204ENST00000376643 NBPF5PQ86XG9 351 aaPredicted RBP19.52■□□□□ 0.72
HDAC6-204ENST00000376643 DPY19L2Q6NUT2 758 aa19.51■□□□□ 0.71
HDAC6-204ENST00000376643 MASTLQ96GX5 879 aa19.51■□□□□ 0.71
HDAC6-204ENST00000376643 BCORQ6W2J9 1755 aa19.5■□□□□ 0.71
HDAC6-204ENST00000376643 GLTPD2A6NH11 291 aa19.5■□□□□ 0.71
HDAC6-204ENST00000376643 TPTE2Q6XPS3 522 aa19.5■□□□□ 0.71
HDAC6-204ENST00000376643 SMC1BQ8NDV3 1235 aa19.5■□□□□ 0.71
HDAC6-204ENST00000376643 SBF1O95248 1867 aa19.5■□□□□ 0.71
HDAC6-204ENST00000376643 LTBP3Q9NS15 1303 aa19.5■□□□□ 0.71
HDAC6-204ENST00000376643 VEGFAP15692 232 aaPredicted RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms