RNA–Protein interactions for RNA: ENST00000376497.7

CLCN6-207, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 3 BASIC

Gene CLCN6, Length 814 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-207ENST00000376497 DIAPH1O60610 1272 aaKnown RBP20.74■□□□□ 0.91
CLCN6-207ENST00000376497 C9orf131Q5VYM1 1079 aa20.74■□□□□ 0.91
CLCN6-207ENST00000376497 VSIG10Q8N0Z9 540 aa20.74■□□□□ 0.91
CLCN6-207ENST00000376497 NRXN2Q9P2S2 1712 aa20.74■□□□□ 0.91
CLCN6-207ENST00000376497 NARFQ9UHQ1 456 aa20.73■□□□□ 0.91
CLCN6-207ENST00000376497 CHRNA5P30532 468 aa20.72■□□□□ 0.91
CLCN6-207ENST00000376497 NMRK2Q9NPI5 230 aa20.72■□□□□ 0.91
CLCN6-207ENST00000376497 COL15A1P39059 1388 aa20.72■□□□□ 0.91
CLCN6-207ENST00000376497 APLP1P51693 650 aa20.71■□□□□ 0.91
CLCN6-207ENST00000376497 ZBTB1Q9Y2K1 713 aa20.71■□□□□ 0.91
CLCN6-207ENST00000376497 DLEC1Q9Y238 1755 aa20.7■□□□□ 0.9
CLCN6-207ENST00000376497 NFIXQ14938 502 aa20.7■□□□□ 0.9
CLCN6-207ENST00000376497 CC2D1BQ5T0F9 858 aaKnown RBP20.7■□□□□ 0.9
CLCN6-207ENST00000376497 BCL2L12Q9HB09 334 aa20.69■□□□□ 0.9
CLCN6-207ENST00000376497 NPC1L1Q9UHC9 1359 aa20.68■□□□□ 0.9
CLCN6-207ENST00000376497 SIPA1L3O60292 1781 aaPredicted RBP20.67■□□□□ 0.9
CLCN6-207ENST00000376497 RBM46Q8TBY0 533 aaKnown RBP20.67■□□□□ 0.9
CLCN6-207ENST00000376497 RNF181Q9P0P0 153 aa20.67■□□□□ 0.9
CLCN6-207ENST00000376497 COL3A1P02461 1466 aaPredicted RBP20.67■□□□□ 0.9
CLCN6-207ENST00000376497 SERPINB2P05120 415 aa20.66■□□□□ 0.9
CLCN6-207ENST00000376497 DNAJC5GQ8N7S2 189 aa20.66■□□□□ 0.9
CLCN6-207ENST00000376497 KDM2BQ8NHM5 1336 aa20.66■□□□□ 0.9
CLCN6-207ENST00000376497 CCDC88AQ3V6T2 1871 aa20.65■□□□□ 0.9
CLCN6-207ENST00000376497 WDR90Q96KV7 1748 aa20.65■□□□□ 0.9
CLCN6-207ENST00000376497 TNRC6CQ9HCJ0 1690 aaKnown RBP20.65■□□□□ 0.9
CLCN6-207ENST00000376497 EIF5P55010 431 aaKnown RBP20.65■□□□□ 0.9
CLCN6-207ENST00000376497 STARD3NLO95772 234 aa20.64■□□□□ 0.89
CLCN6-207ENST00000376497 CANXP27824 592 aaKnown RBP20.64■□□□□ 0.89
CLCN6-207ENST00000376497 TTC5Q8N0Z6 440 aa20.64■□□□□ 0.89
CLCN6-207ENST00000376497 C16orf71Q8IYS4 520 aaPredicted RBP20.63■□□□□ 0.89
CLCN6-207ENST00000376497 IL17REQ8NFR9 667 aa20.63■□□□□ 0.89
CLCN6-207ENST00000376497 GAS2L2Q8NHY3 880 aa20.63■□□□□ 0.89
CLCN6-207ENST00000376497 ZC3H4Q9UPT8 1303 aaKnown RBP20.62■□□□□ 0.89
CLCN6-207ENST00000376497 A0A087WZG4 1122 aa20.62■□□□□ 0.89
CLCN6-207ENST00000376497 GNAT3A8MTJ3 354 aa20.62■□□□□ 0.89
CLCN6-207ENST00000376497 FSTL1Q12841 308 aa20.62■□□□□ 0.89
CLCN6-207ENST00000376497 CNGB1Q14028 1251 aaPredicted RBP20.62■□□□□ 0.89
CLCN6-207ENST00000376497 ZNF790Q6PG37 636 aa20.62■□□□□ 0.89
CLCN6-207ENST00000376497 TEX13AQ9BXU3 409 aaPredicted RBP20.62■□□□□ 0.89
CLCN6-207ENST00000376497 HEG1Q9ULI3 1381 aa20.61■□□□□ 0.89
CLCN6-207ENST00000376497 U2SURPO15042 1029 aaKnown RBP20.61■□□□□ 0.89
CLCN6-207ENST00000376497 TEFQ10587 303 aa20.61■□□□□ 0.89
CLCN6-207ENST00000376497 TTLL6Q8N841 843 aa20.61■□□□□ 0.89
CLCN6-207ENST00000376497 ZNF496Q96IT1 587 aaPredicted RBP20.61■□□□□ 0.89
CLCN6-207ENST00000376497 RRAGCQ9HB90 399 aa20.61■□□□□ 0.89
CLCN6-207ENST00000376497 ANKRD31Q8N7Z5 1873 aa20.6■□□□□ 0.89
CLCN6-207ENST00000376497 RASSF7Q02833 373 aa20.6■□□□□ 0.89
CLCN6-207ENST00000376497 SCN7AQ01118 1682 aa20.6■□□□□ 0.89
CLCN6-207ENST00000376497 C2CD5Q86YS7 1000 aa20.59■□□□□ 0.89
CLCN6-207ENST00000376497 CARMIL3Q8ND23 1372 aa20.59■□□□□ 0.89
CLCN6-207ENST00000376497 H0YIN7 160 aa20.58■□□□□ 0.89
CLCN6-207ENST00000376497 LMNB1P20700 586 aa20.58■□□□□ 0.89
CLCN6-207ENST00000376497 IL6STP40189 918 aaPredicted RBP20.58■□□□□ 0.89
CLCN6-207ENST00000376497 PRELPP51888 382 aa20.58■□□□□ 0.89
CLCN6-207ENST00000376497 TBC1D9BQ66K14 1250 aa20.58■□□□□ 0.89
CLCN6-207ENST00000376497 CEMIPQ8WUJ3 1361 aa20.58■□□□□ 0.88
CLCN6-207ENST00000376497 BICDL1Q6ZP65 573 aa20.57■□□□□ 0.88
CLCN6-207ENST00000376497 PDZRN3Q9UPQ7 1066 aa20.57■□□□□ 0.88
CLCN6-207ENST00000376497 FMNL2Q96PY5 1086 aa20.56■□□□□ 0.88
CLCN6-207ENST00000376497 DICER1Q9UPY3 1922 aaKnown RBP20.56■□□□□ 0.88
CLCN6-207ENST00000376497 TIAM2Q8IVF5 1701 aa20.56■□□□□ 0.88
CLCN6-207ENST00000376497 GLTPD2A6NH11 291 aa20.55■□□□□ 0.88
CLCN6-207ENST00000376497 TBC1D2BQ9UPU7 963 aa20.55■□□□□ 0.88
CLCN6-207ENST00000376497 FER1L6Q2WGJ9 1857 aa20.55■□□□□ 0.88
CLCN6-207ENST00000376497 PHACTR3Q96KR7 559 aa20.54■□□□□ 0.88
CLCN6-207ENST00000376497 BRIP1Q9BX63 1249 aa20.54■□□□□ 0.88
CLCN6-207ENST00000376497 BCORQ6W2J9 1755 aa20.54■□□□□ 0.88
CLCN6-207ENST00000376497 COL11A2P13942 1736 aaPredicted RBP20.53■□□□□ 0.88
CLCN6-207ENST00000376497 NFKBIEO00221 500 aa20.53■□□□□ 0.88
CLCN6-207ENST00000376497 A1BGP04217 495 aa20.53■□□□□ 0.88
CLCN6-207ENST00000376497 PDE6BP35913 854 aa20.53■□□□□ 0.88
CLCN6-207ENST00000376497 PRR5LQ6MZQ0 368 aa20.53■□□□□ 0.88
CLCN6-207ENST00000376497 SMC1BQ8NDV3 1235 aa20.53■□□□□ 0.88
CLCN6-207ENST00000376497 KLRG1Q96E93 195 aa20.53■□□□□ 0.88
CLCN6-207ENST00000376497 RSPH6AQ9H0K4 717 aa20.53■□□□□ 0.88
CLCN6-207ENST00000376497 BTBD11A6QL63 1104 aa20.52■□□□□ 0.88
CLCN6-207ENST00000376497 VEGFAP15692 232 aaPredicted RBP20.52■□□□□ 0.88
CLCN6-207ENST00000376497 PRKAR2BP31323 418 aa20.52■□□□□ 0.88
CLCN6-207ENST00000376497 HTRA3P83110 453 aa20.52■□□□□ 0.88
CLCN6-207ENST00000376497 ZNF330Q9Y3S2 320 aaPredicted RBP20.52■□□□□ 0.88
CLCN6-207ENST00000376497 KCNQ3O43525 872 aa20.51■□□□□ 0.87
CLCN6-207ENST00000376497 CAMTA2O94983 1202 aa20.51■□□□□ 0.87
CLCN6-207ENST00000376497 JMYQ8N9B5 988 aa20.51■□□□□ 0.87
CLCN6-207ENST00000376497 ZNF622Q969S3 477 aaKnown RBP eCLIP20.51■□□□□ 0.87
CLCN6-207ENST00000376497 CFAP53Q96M91 514 aa20.51■□□□□ 0.87
CLCN6-207ENST00000376497 CACNA1SQ13698 1873 aa20.5■□□□□ 0.87
CLCN6-207ENST00000376497 NPM2Q86SE8 214 aaKnown RBP20.5■□□□□ 0.87
CLCN6-207ENST00000376497 SETDB2Q96T68 719 aa20.5■□□□□ 0.87
CLCN6-207ENST00000376497 ARFGEF2Q9Y6D5 1785 aa20.49■□□□□ 0.87
CLCN6-207ENST00000376497 NUDCQ9Y266 331 aa20.49■□□□□ 0.87
CLCN6-207ENST00000376497 USP16Q9Y5T5 823 aa20.49■□□□□ 0.87
CLCN6-207ENST00000376497 SLX4Q8IY92 1834 aa20.48■□□□□ 0.87
CLCN6-207ENST00000376497 C21orf2O43822 256 aa20.48■□□□□ 0.87
CLCN6-207ENST00000376497 CCDC24Q8N4L8 307 aa20.48■□□□□ 0.87
CLCN6-207ENST00000376497 POTECB2RU33 542 aa20.47■□□□□ 0.87
CLCN6-207ENST00000376497 DPY19L2Q6NUT2 758 aa20.47■□□□□ 0.87
CLCN6-207ENST00000376497 DZIP3Q86Y13 1208 aaKnown RBP20.47■□□□□ 0.87
CLCN6-207ENST00000376497 CNBD1Q8NA66 436 aa20.47■□□□□ 0.87
CLCN6-207ENST00000376497 CLEC4GQ6UXB4 293 aa20.46■□□□□ 0.87
CLCN6-207ENST00000376497 CNKSR1Q969H4 720 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms