RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 CD2APQ9Y5K6 639 aa18.88■□□□□ 0.61
CLCN6-203ENST00000376490 STARD3NLO95772 234 aa18.87■□□□□ 0.61
CLCN6-203ENST00000376490 SOS1Q07889 1333 aaPredicted RBP18.87■□□□□ 0.61
CLCN6-203ENST00000376490 TEX13AQ9BXU3 409 aaPredicted RBP18.87■□□□□ 0.61
CLCN6-203ENST00000376490 GPR162Q16538 588 aa18.86■□□□□ 0.61
CLCN6-203ENST00000376490 THUMPD2Q9BTF0 503 aaKnown RBP18.86■□□□□ 0.61
CLCN6-203ENST00000376490 USP42Q9H9J4 1324 aaKnown RBP18.85■□□□□ 0.61
CLCN6-203ENST00000376490 FKBP8Q14318 412 aa18.85■□□□□ 0.61
CLCN6-203ENST00000376490 CCDC146Q8IYE0 955 aa18.85■□□□□ 0.61
CLCN6-203ENST00000376490 PELP1Q8IZL8 1130 aaKnown RBP18.85■□□□□ 0.61
CLCN6-203ENST00000376490 ADAMTS8Q9UP79 889 aa18.85■□□□□ 0.61
CLCN6-203ENST00000376490 USP16Q9Y5T5 823 aa18.85■□□□□ 0.61
CLCN6-203ENST00000376490 KIF13BQ9NQT8 1826 aa18.85■□□□□ 0.61
CLCN6-203ENST00000376490 KDM3BQ7LBC6 1761 aa18.84■□□□□ 0.61
CLCN6-203ENST00000376490 N4BP2Q86UW6 1770 aaPredicted RBP18.84■□□□□ 0.61
CLCN6-203ENST00000376490 PRAMEF22A3QJZ6 481 aa18.84■□□□□ 0.61
CLCN6-203ENST00000376490 ZPR1O75312 459 aa18.84■□□□□ 0.61
CLCN6-203ENST00000376490 A1BGP04217 495 aa18.84■□□□□ 0.61
CLCN6-203ENST00000376490 RIPK4P57078 832 aa18.84■□□□□ 0.61
CLCN6-203ENST00000376490 WDR43Q15061 677 aaKnown RBP eCLIP18.84■□□□□ 0.61
CLCN6-203ENST00000376490 USPL1Q5W0Q7 1092 aa18.84■□□□□ 0.61
CLCN6-203ENST00000376490 COL15A1P39059 1388 aa18.83■□□□□ 0.61
CLCN6-203ENST00000376490 TMPOP42166 694 aaKnown RBP18.83■□□□□ 0.6
CLCN6-203ENST00000376490 NARFQ9UHQ1 456 aa18.83■□□□□ 0.6
CLCN6-203ENST00000376490 AFDNP55196 1824 aaKnown RBP18.82■□□□□ 0.6
CLCN6-203ENST00000376490 EIF5P55010 431 aaKnown RBP18.82■□□□□ 0.6
CLCN6-203ENST00000376490 RRP7AQ9Y3A4 280 aaKnown RBP18.82■□□□□ 0.6
CLCN6-203ENST00000376490 PARP3Q9Y6F1 533 aa18.82■□□□□ 0.6
CLCN6-203ENST00000376490 SNRPA1P09661 255 aaKnown RBP18.81■□□□□ 0.6
CLCN6-203ENST00000376490 YY1P25490 414 aa18.81■□□□□ 0.6
CLCN6-203ENST00000376490 NEUROD2Q15784 382 aa18.81■□□□□ 0.6
CLCN6-203ENST00000376490 RUNDC1Q96C34 613 aa18.81■□□□□ 0.6
CLCN6-203ENST00000376490 ZNF330Q9Y3S2 320 aaPredicted RBP18.81■□□□□ 0.6
CLCN6-203ENST00000376490 YBX3P16989 372 aaKnown RBP eCLIP18.8■□□□□ 0.6
CLCN6-203ENST00000376490 TM4SF1P30408 202 aa18.8■□□□□ 0.6
CLCN6-203ENST00000376490 PNISRQ8TF01 805 aaKnown RBP18.8■□□□□ 0.6
CLCN6-203ENST00000376490 BCL2L12Q9HB09 334 aa18.8■□□□□ 0.6
CLCN6-203ENST00000376490 KIAA1551Q9HCM1 1747 aa18.8■□□□□ 0.6
CLCN6-203ENST00000376490 PIP4K2AP48426 406 aaPredicted RBP18.79■□□□□ 0.6
CLCN6-203ENST00000376490 DDR1Q08345 913 aa18.79■□□□□ 0.6
CLCN6-203ENST00000376490 CCDC184Q52MB2 194 aa18.79■□□□□ 0.6
CLCN6-203ENST00000376490 TBC1D2BQ9UPU7 963 aa18.79■□□□□ 0.6
CLCN6-203ENST00000376490 A0A087WZG4 1122 aa18.78■□□□□ 0.6
CLCN6-203ENST00000376490 IL6STP40189 918 aaPredicted RBP18.78■□□□□ 0.6
CLCN6-203ENST00000376490 WWC3Q9ULE0 1092 aa18.78■□□□□ 0.6
CLCN6-203ENST00000376490 LAMB4A4D0S4 1761 aa18.77■□□□□ 0.6
CLCN6-203ENST00000376490 A0A0G2JLW4 131 aa18.76■□□□□ 0.59
CLCN6-203ENST00000376490 POLRMTO00411 1230 aaKnown RBP18.76■□□□□ 0.59
CLCN6-203ENST00000376490 EIF4A1P60842 406 aaKnown RBP18.76■□□□□ 0.59
CLCN6-203ENST00000376490 NFIXQ14938 502 aa18.76■□□□□ 0.59
CLCN6-203ENST00000376490 TRIM35Q9UPQ4 493 aa18.75■□□□□ 0.59
CLCN6-203ENST00000376490 BRCA1P38398 1863 aaKnown RBP18.75■□□□□ 0.59
CLCN6-203ENST00000376490 C10orf71Q711Q0 1435 aa18.74■□□□□ 0.59
CLCN6-203ENST00000376490 NBPF26B4DH59 902 aa18.74■□□□□ 0.59
CLCN6-203ENST00000376490 GIGYF1O75420 1035 aaPredicted RBP18.74■□□□□ 0.59
CLCN6-203ENST00000376490 TGFB2P61812 414 aa18.74■□□□□ 0.59
CLCN6-203ENST00000376490 LMOD3Q0VAK6 560 aa18.74■□□□□ 0.59
CLCN6-203ENST00000376490 NBPF10Q6P3W6 841 aaKnown RBP18.74■□□□□ 0.59
CLCN6-203ENST00000376490 BICDL1Q6ZP65 573 aa18.74■□□□□ 0.59
CLCN6-203ENST00000376490 NPM2Q86SE8 214 aaKnown RBP18.74■□□□□ 0.59
CLCN6-203ENST00000376490 NBPF15Q8N660 670 aa18.74■□□□□ 0.59
CLCN6-203ENST00000376490 SCN7AQ01118 1682 aa18.73■□□□□ 0.59
CLCN6-203ENST00000376490 GRIN3BO60391 1043 aa18.73■□□□□ 0.59
CLCN6-203ENST00000376490 TSPYL4Q9UJ04 414 aa18.73■□□□□ 0.59
CLCN6-203ENST00000376490 NRXN2Q9P2S2 1712 aa18.73■□□□□ 0.59
CLCN6-203ENST00000376490 BCORQ6W2J9 1755 aa18.73■□□□□ 0.59
CLCN6-203ENST00000376490 PXDNLA1KZ92 1463 aa18.72■□□□□ 0.59
CLCN6-203ENST00000376490 SERPINB2P05120 415 aa18.72■□□□□ 0.59
CLCN6-203ENST00000376490 DPEP1P16444 411 aa18.72■□□□□ 0.59
CLCN6-203ENST00000376490 TBC1D9BQ66K14 1250 aa18.72■□□□□ 0.59
CLCN6-203ENST00000376490 DZIP3Q86Y13 1208 aaKnown RBP18.72■□□□□ 0.59
CLCN6-203ENST00000376490 APAF1O14727 1248 aa18.71■□□□□ 0.59
CLCN6-203ENST00000376490 ANP32CO43423 234 aa18.71■□□□□ 0.59
CLCN6-203ENST00000376490 CAMTA2O94983 1202 aa18.71■□□□□ 0.59
CLCN6-203ENST00000376490 NUP98P52948 1817 aa18.7■□□□□ 0.58
CLCN6-203ENST00000376490 KCNA3P22001 575 aa18.7■□□□□ 0.58
CLCN6-203ENST00000376490 BABAM1Q9NWV8 329 aa18.7■□□□□ 0.58
CLCN6-203ENST00000376490 LAS1LQ9Y4W2 734 aaKnown RBP18.7■□□□□ 0.58
CLCN6-203ENST00000376490 CHL1O00533 1208 aa18.68■□□□□ 0.58
CLCN6-203ENST00000376490 NGEFQ8N5V2 710 aa18.68■□□□□ 0.58
CLCN6-203ENST00000376490 ANKRD31Q8N7Z5 1873 aa18.68■□□□□ 0.58
CLCN6-203ENST00000376490 ARFGEF1Q9Y6D6 1849 aa18.67■□□□□ 0.58
CLCN6-203ENST00000376490 UTRNP46939 3433 aa18.67■□□□□ 0.58
CLCN6-203ENST00000376490 CHRNA5P30532 468 aa18.67■□□□□ 0.58
CLCN6-203ENST00000376490 BCS1LQ9Y276 419 aa18.67■□□□□ 0.58
CLCN6-203ENST00000376490 MYL6BP14649 208 aa18.66■□□□□ 0.58
CLCN6-203ENST00000376490 EIF2S2P20042 333 aaKnown RBP18.66■□□□□ 0.58
CLCN6-203ENST00000376490 SETDB2Q96T68 719 aa18.66■□□□□ 0.58
CLCN6-203ENST00000376490 MRS2Q9HD23 443 aa18.66■□□□□ 0.58
CLCN6-203ENST00000376490 GOLGB1Q14789 3259 aaKnown RBP18.66■□□□□ 0.58
CLCN6-203ENST00000376490 SENP3-EIF4A1A0A087X0R7 540 aa18.65■□□□□ 0.58
CLCN6-203ENST00000376490 CLEC4GQ6UXB4 293 aa18.65■□□□□ 0.58
CLCN6-203ENST00000376490 CCDC24Q8N4L8 307 aa18.65■□□□□ 0.58
CLCN6-203ENST00000376490 PIM2Q9P1W9 311 aa18.65■□□□□ 0.58
CLCN6-203ENST00000376490 DLEC1Q9Y238 1755 aa18.64■□□□□ 0.57
CLCN6-203ENST00000376490 HLFQ16534 295 aa18.64■□□□□ 0.57
CLCN6-203ENST00000376490 KRT24Q2M2I5 525 aa18.64■□□□□ 0.57
CLCN6-203ENST00000376490 TTLL7Q6ZT98 887 aa18.63■□□□□ 0.57
CLCN6-203ENST00000376490 ZNF784Q8NCA9 323 aaPredicted RBP18.63■□□□□ 0.57
CLCN6-203ENST00000376490 CARMIL3Q8ND23 1372 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms