RNA–Protein interactions for RNA: ENST00000375320.5

APOA1-203, Transcript of apolipoprotein A1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene APOA1, Length 940 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-203ENST00000375320 DCAF8L1A6NGE4 600 aa18.11■□□□□ 0.49
APOA1-203ENST00000375320 HTATSF1O43719 755 aaKnown RBP18.11■□□□□ 0.49
APOA1-203ENST00000375320 RFC4P35249 363 aa18.11■□□□□ 0.49
APOA1-203ENST00000375320 NRXN2Q9P2S2 1712 aa18.11■□□□□ 0.49
APOA1-203ENST00000375320 C10orf71Q711Q0 1435 aa18.1■□□□□ 0.49
APOA1-203ENST00000375320 MMP10P09238 476 aa18.1■□□□□ 0.49
APOA1-203ENST00000375320 GYS1P13807 737 aa18.1■□□□□ 0.49
APOA1-203ENST00000375320 FMNL2Q96PY5 1086 aa18.1■□□□□ 0.49
APOA1-203ENST00000375320 PNNQ9H307 717 aaKnown RBP18.1■□□□□ 0.49
APOA1-203ENST00000375320 SRP68Q9UHB9 627 aaKnown RBP18.1■□□□□ 0.49
APOA1-203ENST00000375320 ZNF316A6NFI3 1004 aaPredicted RBP18.09■□□□□ 0.49
APOA1-203ENST00000375320 KCNQ3O43525 872 aa18.09■□□□□ 0.49
APOA1-203ENST00000375320 WDR43Q15061 677 aaKnown RBP eCLIP18.09■□□□□ 0.49
APOA1-203ENST00000375320 DLEC1Q9Y238 1755 aa18.08■□□□□ 0.48
APOA1-203ENST00000375320 THUMPD2Q9BTF0 503 aaKnown RBP18.07■□□□□ 0.48
APOA1-203ENST00000375320 STARD3NLO95772 234 aa18.06■□□□□ 0.48
APOA1-203ENST00000375320 CCDC146Q8IYE0 955 aa18.06■□□□□ 0.48
APOA1-203ENST00000375320 NLGN1Q8N2Q7 840 aa18.06■□□□□ 0.48
APOA1-203ENST00000375320 CD2APQ9Y5K6 639 aa18.06■□□□□ 0.48
APOA1-203ENST00000375320 PXDNLA1KZ92 1463 aa18.06■□□□□ 0.48
APOA1-203ENST00000375320 CANXP27824 592 aaKnown RBP18.05■□□□□ 0.48
APOA1-203ENST00000375320 PELP1Q8IZL8 1130 aaKnown RBP18.05■□□□□ 0.48
APOA1-203ENST00000375320 ARFGEF1Q9Y6D6 1849 aa18.05■□□□□ 0.48
APOA1-203ENST00000375320 ANKRD31Q8N7Z5 1873 aa18.04■□□□□ 0.48
APOA1-203ENST00000375320 FKBP8Q14318 412 aa18.04■□□□□ 0.48
APOA1-203ENST00000375320 TEX13AQ9BXU3 409 aaPredicted RBP18.04■□□□□ 0.48
APOA1-203ENST00000375320 ZPR1O75312 459 aa18.03■□□□□ 0.48
APOA1-203ENST00000375320 TAF7Q15545 349 aaPredicted RBP18.03■□□□□ 0.48
APOA1-203ENST00000375320 USPL1Q5W0Q7 1092 aa18.03■□□□□ 0.48
APOA1-203ENST00000375320 COL11A2P13942 1736 aaPredicted RBP18.03■□□□□ 0.48
APOA1-203ENST00000375320 PRAMEF22A3QJZ6 481 aa18.02■□□□□ 0.48
APOA1-203ENST00000375320 TMPOP42166 694 aaKnown RBP18.02■□□□□ 0.48
APOA1-203ENST00000375320 DDR1Q08345 913 aa18.02■□□□□ 0.48
APOA1-203ENST00000375320 GPR162Q16538 588 aa18.02■□□□□ 0.48
APOA1-203ENST00000375320 MIS18AQ9NYP9 233 aa18.02■□□□□ 0.48
APOA1-203ENST00000375320 RRP7AQ9Y3A4 280 aaKnown RBP18.02■□□□□ 0.48
APOA1-203ENST00000375320 ZNF330Q9Y3S2 320 aaPredicted RBP18.02■□□□□ 0.48
APOA1-203ENST00000375320 EIF5P55010 431 aaKnown RBP18.01■□□□□ 0.47
APOA1-203ENST00000375320 RIPK4P57078 832 aa18.01■□□□□ 0.47
APOA1-203ENST00000375320 LMOD3Q0VAK6 560 aa18.01■□□□□ 0.47
APOA1-203ENST00000375320 PNISRQ8TF01 805 aaKnown RBP18.01■□□□□ 0.47
APOA1-203ENST00000375320 RUNDC1Q96C34 613 aa18.01■□□□□ 0.47
APOA1-203ENST00000375320 NARFQ9UHQ1 456 aa18.01■□□□□ 0.47
APOA1-203ENST00000375320 PARP3Q9Y6F1 533 aa18.01■□□□□ 0.47
APOA1-203ENST00000375320 CACNA1SQ13698 1873 aa18.01■□□□□ 0.47
APOA1-203ENST00000375320 NUP98P52948 1817 aa18■□□□□ 0.47
APOA1-203ENST00000375320 SNRPA1P09661 255 aaKnown RBP18■□□□□ 0.47
APOA1-203ENST00000375320 ADAMTS8Q9UP79 889 aa18■□□□□ 0.47
APOA1-203ENST00000375320 A1BGP04217 495 aa17.99■□□□□ 0.47
APOA1-203ENST00000375320 YBX3P16989 372 aaKnown RBP eCLIP17.99■□□□□ 0.47
APOA1-203ENST00000375320 IL6STP40189 918 aaPredicted RBP17.99■□□□□ 0.47
APOA1-203ENST00000375320 PIP4K2AP48426 406 aaPredicted RBP17.99■□□□□ 0.47
APOA1-203ENST00000375320 USP16Q9Y5T5 823 aa17.99■□□□□ 0.47
APOA1-203ENST00000375320 A0A087WZG4 1122 aa17.98■□□□□ 0.47
APOA1-203ENST00000375320 YY1P25490 414 aa17.98■□□□□ 0.47
APOA1-203ENST00000375320 BCL2L12Q9HB09 334 aa17.98■□□□□ 0.47
APOA1-203ENST00000375320 ANKRD36CQ5JPF3 1778 aa17.98■□□□□ 0.47
APOA1-203ENST00000375320 POLRMTO00411 1230 aaKnown RBP17.97■□□□□ 0.47
APOA1-203ENST00000375320 NEUROD2Q15784 382 aa17.97■□□□□ 0.47
APOA1-203ENST00000375320 WWC3Q9ULE0 1092 aa17.97■□□□□ 0.47
APOA1-203ENST00000375320 NFIXQ14938 502 aa17.96■□□□□ 0.47
APOA1-203ENST00000375320 TSPYL4Q9UJ04 414 aa17.96■□□□□ 0.47
APOA1-203ENST00000375320 ARFGEF2Q9Y6D5 1785 aa17.96■□□□□ 0.47
APOA1-203ENST00000375320 CARMIL3Q8ND23 1372 aa17.95■□□□□ 0.46
APOA1-203ENST00000375320 EIF4A1P60842 406 aaKnown RBP17.95■□□□□ 0.46
APOA1-203ENST00000375320 CCDC184Q52MB2 194 aa17.95■□□□□ 0.46
APOA1-203ENST00000375320 NPM2Q86SE8 214 aaKnown RBP17.95■□□□□ 0.46
APOA1-203ENST00000375320 TBC1D2BQ9UPU7 963 aa17.95■□□□□ 0.46
APOA1-203ENST00000375320 ANP32CO43423 234 aa17.94■□□□□ 0.46
APOA1-203ENST00000375320 TM4SF1P30408 202 aa17.94■□□□□ 0.46
APOA1-203ENST00000375320 DZIP3Q86Y13 1208 aaKnown RBP17.94■□□□□ 0.46
APOA1-203ENST00000375320 TRIM35Q9UPQ4 493 aa17.94■□□□□ 0.46
APOA1-203ENST00000375320 NBPF26B4DH59 902 aa17.93■□□□□ 0.46
APOA1-203ENST00000375320 GIGYF1O75420 1035 aaPredicted RBP17.93■□□□□ 0.46
APOA1-203ENST00000375320 CAMTA2O94983 1202 aa17.93■□□□□ 0.46
APOA1-203ENST00000375320 NBPF10Q6P3W6 841 aaKnown RBP17.93■□□□□ 0.46
APOA1-203ENST00000375320 NBPF15Q8N660 670 aa17.93■□□□□ 0.46
APOA1-203ENST00000375320 TGFB2P61812 414 aa17.92■□□□□ 0.46
APOA1-203ENST00000375320 TBC1D9BQ66K14 1250 aa17.92■□□□□ 0.46
APOA1-203ENST00000375320 BICDL1Q6ZP65 573 aa17.92■□□□□ 0.46
APOA1-203ENST00000375320 TNRC6CQ9HCJ0 1690 aaKnown RBP17.92■□□□□ 0.46
APOA1-203ENST00000375320 GRIN3BO60391 1043 aa17.91■□□□□ 0.46
APOA1-203ENST00000375320 A0A0G2JLW4 131 aa17.9■□□□□ 0.46
APOA1-203ENST00000375320 DPEP1P16444 411 aa17.9■□□□□ 0.46
APOA1-203ENST00000375320 MRS2Q9HD23 443 aa17.9■□□□□ 0.46
APOA1-203ENST00000375320 BABAM1Q9NWV8 329 aa17.9■□□□□ 0.46
APOA1-203ENST00000375320 APAF1O14727 1248 aa17.89■□□□□ 0.45
APOA1-203ENST00000375320 SERPINB2P05120 415 aa17.89■□□□□ 0.45
APOA1-203ENST00000375320 ZNF652Q9Y2D9 606 aa17.88■□□□□ 0.45
APOA1-203ENST00000375320 LAS1LQ9Y4W2 734 aaKnown RBP17.88■□□□□ 0.45
APOA1-203ENST00000375320 TIAM2Q8IVF5 1701 aa17.87■□□□□ 0.45
APOA1-203ENST00000375320 SBF1O95248 1867 aa17.87■□□□□ 0.45
APOA1-203ENST00000375320 CHRNA5P30532 468 aa17.87■□□□□ 0.45
APOA1-203ENST00000375320 ERBB4Q15303 1308 aa17.87■□□□□ 0.45
APOA1-203ENST00000375320 CHL1O00533 1208 aa17.86■□□□□ 0.45
APOA1-203ENST00000375320 MYL6BP14649 208 aa17.86■□□□□ 0.45
APOA1-203ENST00000375320 BCS1LQ9Y276 419 aa17.86■□□□□ 0.45
APOA1-203ENST00000375320 ATP10DQ9P241 1426 aa17.86■□□□□ 0.45
APOA1-203ENST00000375320 CCDC88AQ3V6T2 1871 aa17.86■□□□□ 0.45
APOA1-203ENST00000375320 KCNA3P22001 575 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms