RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 CCAR1Q8IX12 1150 aaKnown RBP14.45□□□□□ -0.1
NPLOC4-202ENST00000374747 A0A1W2PP64 1363 aa14.45□□□□□ -0.1
NPLOC4-202ENST00000374747 UGGT1Q9NYU2 1555 aa14.45□□□□□ -0.1
NPLOC4-202ENST00000374747 PTPRCP08575 1304 aa14.45□□□□□ -0.1
NPLOC4-202ENST00000374747 PDCL2Q8N4E4 241 aa14.45□□□□□ -0.1
NPLOC4-202ENST00000374747 POLKQ9UBT6 870 aa14.45□□□□□ -0.1
NPLOC4-202ENST00000374747 NPC1L1Q9UHC9 1359 aa14.45□□□□□ -0.1
NPLOC4-202ENST00000374747 CCDC57Q2TAC2 916 aa14.45□□□□□ -0.1
NPLOC4-202ENST00000374747 IFNL2Q8IZJ0 200 aa14.45□□□□□ -0.1
NPLOC4-202ENST00000374747 CEP57L1Q8IYX8 460 aa14.44□□□□□ -0.1
NPLOC4-202ENST00000374747 PLCD4Q9BRC7 762 aa14.44□□□□□ -0.1
NPLOC4-202ENST00000374747 NUP62CLQ9H1M0 184 aa14.44□□□□□ -0.1
NPLOC4-202ENST00000374747 KCNA6P17658 529 aa14.44□□□□□ -0.1
NPLOC4-202ENST00000374747 TAF3Q5VWG9 929 aa14.44□□□□□ -0.1
NPLOC4-202ENST00000374747 DBF4Q9UBU7 674 aaPredicted RBP14.44□□□□□ -0.1
NPLOC4-202ENST00000374747 MLH3Q9UHC1 1453 aa14.44□□□□□ -0.1
NPLOC4-202ENST00000374747 FBLN1P23142 703 aa14.43□□□□□ -0.1
NPLOC4-202ENST00000374747 SYCP1Q15431 976 aa14.43□□□□□ -0.1
NPLOC4-202ENST00000374747 STIM1Q13586 685 aa14.43□□□□□ -0.1
NPLOC4-202ENST00000374747 DEF6Q9H4E7 631 aa14.43□□□□□ -0.1
NPLOC4-202ENST00000374747 CFAP65Q6ZU64 1925 aaKnown RBP14.43□□□□□ -0.1
NPLOC4-202ENST00000374747 STK3Q13188 491 aa14.43□□□□□ -0.1
NPLOC4-202ENST00000374747 SPATA32Q96LK8 384 aa14.43□□□□□ -0.1
NPLOC4-202ENST00000374747 MBIPQ9NS73 344 aa14.43□□□□□ -0.1
NPLOC4-202ENST00000374747 FAM177A1Q8N128 213 aaPredicted RBP14.43□□□□□ -0.1
NPLOC4-202ENST00000374747 SIL1Q9H173 461 aa14.43□□□□□ -0.1
NPLOC4-202ENST00000374747 HYPKQ9NX55 129 aa14.43□□□□□ -0.1
NPLOC4-202ENST00000374747 MTMR7Q9Y216 660 aa14.43□□□□□ -0.1
NPLOC4-202ENST00000374747 YEATS2Q9ULM3 1422 aa14.43□□□□□ -0.1
NPLOC4-202ENST00000374747 SEC24BO95487 1268 aa14.43□□□□□ -0.1
NPLOC4-202ENST00000374747 ZMYM4Q5VZL5 1548 aa14.42□□□□□ -0.1
NPLOC4-202ENST00000374747 TTC39AQ5SRH9 613 aa14.42□□□□□ -0.1
NPLOC4-202ENST00000374747 IQCEQ6IPM2 695 aa14.42□□□□□ -0.1
NPLOC4-202ENST00000374747 ZSCAN31Q96LW9 406 aaPredicted RBP14.42□□□□□ -0.1
NPLOC4-202ENST00000374747 FLT4P35916 1363 aa14.42□□□□□ -0.1
NPLOC4-202ENST00000374747 GNL3LQ9NVN8 582 aaKnown RBP14.42□□□□□ -0.1
NPLOC4-202ENST00000374747 UNC13BO14795 1591 aa14.42□□□□□ -0.1
NPLOC4-202ENST00000374747 PTCD1O75127 700 aaKnown RBP14.42□□□□□ -0.1
NPLOC4-202ENST00000374747 ZRSR2Q15696 482 aaKnown RBP14.42□□□□□ -0.1
NPLOC4-202ENST00000374747 CFAP45Q9UL16 551 aa14.42□□□□□ -0.1
NPLOC4-202ENST00000374747 SLC3A2P08195 630 aaKnown RBP14.42□□□□□ -0.1
NPLOC4-202ENST00000374747 PDIA4P13667 645 aaKnown RBP14.42□□□□□ -0.1
NPLOC4-202ENST00000374747 TRIM22Q8IYM9 498 aa14.42□□□□□ -0.1
NPLOC4-202ENST00000374747 NEFHP12036 1026 aa14.41□□□□□ -0.1
NPLOC4-202ENST00000374747 TRIM27P14373 513 aa14.41□□□□□ -0.1
NPLOC4-202ENST00000374747 EIF4A2Q14240 407 aaKnown RBP14.41□□□□□ -0.1
NPLOC4-202ENST00000374747 SAMD1Q6SPF0 538 aaPredicted RBP14.41□□□□□ -0.1
NPLOC4-202ENST00000374747 KRT18P05783 430 aaKnown RBP14.41□□□□□ -0.1
NPLOC4-202ENST00000374747 DNAAF4Q8WXU2 420 aa14.41□□□□□ -0.1
NPLOC4-202ENST00000374747 RAB11FIP3O75154 756 aa14.4□□□□□ -0.1
NPLOC4-202ENST00000374747 ADAMTS2O95450 1211 aa14.4□□□□□ -0.1
NPLOC4-202ENST00000374747 FILIP1Q7Z7B0 1213 aa14.4□□□□□ -0.1
NPLOC4-202ENST00000374747 AACSQ86V21 672 aa14.4□□□□□ -0.1
NPLOC4-202ENST00000374747 TRMT2AQ8IZ69 625 aaKnown RBP14.4□□□□□ -0.1
NPLOC4-202ENST00000374747 UPF3BQ9BZI7 483 aaKnown RBP14.4□□□□□ -0.1
NPLOC4-202ENST00000374747 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.4□□□□□ -0.14e-9■■■■□ 20.5
NPLOC4-202ENST00000374747 CEP126Q9P2H0 1117 aa14.4□□□□□ -0.1
NPLOC4-202ENST00000374747 UBXN4Q92575 508 aa14.4□□□□□ -0.1
NPLOC4-202ENST00000374747 TMEM2Q9UHN6 1383 aa14.4□□□□□ -0.1
NPLOC4-202ENST00000374747 NCKAP5LQ9HCH0 1330 aa14.4□□□□□ -0.1
NPLOC4-202ENST00000374747 FAM83GA6ND36 823 aa14.4□□□□□ -0.1
NPLOC4-202ENST00000374747 EXOC5O00471 708 aa14.4□□□□□ -0.1
NPLOC4-202ENST00000374747 MPHOSPH8Q99549 860 aa14.4□□□□□ -0.1
NPLOC4-202ENST00000374747 IQGAP3Q86VI3 1631 aa14.4□□□□□ -0.1
NPLOC4-202ENST00000374747 FLIIQ13045 1269 aa14.4□□□□□ -0.1
NPLOC4-202ENST00000374747 BLOC1S2Q6QNY1 142 aa14.4□□□□□ -0.1
NPLOC4-202ENST00000374747 CNKSR2Q8WXI2 1034 aa14.4□□□□□ -0.1
NPLOC4-202ENST00000374747 KIF2AO00139 706 aaPredicted RBP14.4□□□□□ -0.1
NPLOC4-202ENST00000374747 RLBP1P12271 317 aa14.4□□□□□ -0.1
NPLOC4-202ENST00000374747 KIF1BPQ96EK5 621 aa14.39□□□□□ -0.11
NPLOC4-202ENST00000374747 ZRANB1Q9UGI0 708 aa14.39□□□□□ -0.11
NPLOC4-202ENST00000374747 CCDC102AQ96A19 550 aa14.39□□□□□ -0.11
NPLOC4-202ENST00000374747 PDRG1Q9NUG6 133 aa14.39□□□□□ -0.11
NPLOC4-202ENST00000374747 ERICH4A6NGS2 130 aa14.39□□□□□ -0.11
NPLOC4-202ENST00000374747 SMTNL1A8MU46 457 aa14.39□□□□□ -0.11
NPLOC4-202ENST00000374747 SYCE3A1L190 88 aa14.39□□□□□ -0.11
NPLOC4-202ENST00000374747 ARHGAP45Q92619 1136 aa14.39□□□□□ -0.11
NPLOC4-202ENST00000374747 IKQ13123 557 aaPredicted RBP14.38□□□□□ -0.11
NPLOC4-202ENST00000374747 MAP3K11Q16584 847 aa14.38□□□□□ -0.11
NPLOC4-202ENST00000374747 CHRNA2Q15822 529 aa14.38□□□□□ -0.11
NPLOC4-202ENST00000374747 SEPT7Q16181 437 aaKnown RBP14.38□□□□□ -0.11
NPLOC4-202ENST00000374747 TEX13AQ9BXU3 409 aaPredicted RBP14.38□□□□□ -0.11
NPLOC4-202ENST00000374747 EDC4Q6P2E9 1401 aaKnown RBP14.38□□□□□ -0.11
NPLOC4-202ENST00000374747 SIRT1Q96EB6 747 aa14.38□□□□□ -0.11
NPLOC4-202ENST00000374747 CENPHQ9H3R5 247 aa14.38□□□□□ -0.11
NPLOC4-202ENST00000374747 TMCO3Q6UWJ1 677 aa14.37□□□□□ -0.11
NPLOC4-202ENST00000374747 IL1RAPL2Q9NP60 686 aa14.37□□□□□ -0.11
NPLOC4-202ENST00000374747 FAM193AP78312 1265 aa14.37□□□□□ -0.11
NPLOC4-202ENST00000374747 EXOC6BQ9Y2D4 811 aa14.37□□□□□ -0.11
NPLOC4-202ENST00000374747 ZNF652Q9Y2D9 606 aa14.37□□□□□ -0.11
NPLOC4-202ENST00000374747 F6X3S4 739 aa14.37□□□□□ -0.11
NPLOC4-202ENST00000374747 ENOX2Q16206 610 aaKnown RBP14.37□□□□□ -0.11
NPLOC4-202ENST00000374747 ANKRD18AQ8IVF6 992 aa14.37□□□□□ -0.11
NPLOC4-202ENST00000374747 ZSCAN25Q6NSZ9 544 aa14.37□□□□□ -0.11
NPLOC4-202ENST00000374747 MYD88Q99836 296 aa14.37□□□□□ -0.11
NPLOC4-202ENST00000374747 PIK3R4Q99570 1358 aa14.37□□□□□ -0.11
NPLOC4-202ENST00000374747 CDKL5O76039 1030 aa14.37□□□□□ -0.11
NPLOC4-202ENST00000374747 JAKMIP1Q96N16 626 aaKnown RBP14.37□□□□□ -0.11
NPLOC4-202ENST00000374747 GBP3Q9H0R5 595 aa14.36□□□□□ -0.11
NPLOC4-202ENST00000374747 PODXL2Q9NZ53 605 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms