RNA–Protein interactions for RNA: ENST00000373571.5

HDAC8-206, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-206ENST00000373571 NBPF7P0C2Y1 421 aaPredicted RBP20.42■□□□□ 0.86
HDAC8-206ENST00000373571 MCCP23508 829 aa20.42■□□□□ 0.86
HDAC8-206ENST00000373571 C1orf141Q5JVX7 400 aa20.42■□□□□ 0.86
HDAC8-206ENST00000373571 NCAPD2Q15021 1401 aa20.42■□□□□ 0.86
HDAC8-206ENST00000373571 RNMTO43148 476 aaKnown RBP20.41■□□□□ 0.86
HDAC8-206ENST00000373571 SRGAP3O43295 1099 aa20.41■□□□□ 0.86
HDAC8-206ENST00000373571 ANXA1P04083 346 aa20.41■□□□□ 0.86
HDAC8-206ENST00000373571 UNC5CLQ8IV45 518 aa20.41■□□□□ 0.86
HDAC8-206ENST00000373571 ZGPATQ8N5A5 531 aaKnown RBP20.41■□□□□ 0.86
HDAC8-206ENST00000373571 LMOD2Q6P5Q4 547 aa20.41■□□□□ 0.86
HDAC8-206ENST00000373571 NUTM1Q86Y26 1132 aa20.41■□□□□ 0.86
HDAC8-206ENST00000373571 ANO2Q9NQ90 1003 aa20.41■□□□□ 0.86
HDAC8-206ENST00000373571 NEK4P51957 841 aa20.4■□□□□ 0.86
HDAC8-206ENST00000373571 PKP1Q13835 747 aa20.4■□□□□ 0.86
HDAC8-206ENST00000373571 RHPN1Q8TCX5 695 aa20.4■□□□□ 0.86
HDAC8-206ENST00000373571 ANKRD24Q8TF21 1146 aa20.4■□□□□ 0.86
HDAC8-206ENST00000373571 ADAMTSL3P82987 1691 aa20.4■□□□□ 0.86
HDAC8-206ENST00000373571 ADCY9O60503 1353 aa20.4■□□□□ 0.86
HDAC8-206ENST00000373571 OVOS2A0A0G2JMS6 1433 aa20.39■□□□□ 0.85
HDAC8-206ENST00000373571 ANAPC15P60006 121 aa20.38■□□□□ 0.85
HDAC8-206ENST00000373571 KIF1BPQ96EK5 621 aa20.38■□□□□ 0.85
HDAC8-206ENST00000373571 DBF4Q9UBU7 674 aaPredicted RBP20.38■□□□□ 0.85
HDAC8-206ENST00000373571 PALD1Q9ULE6 856 aa20.38■□□□□ 0.85
HDAC8-206ENST00000373571 CAMTA1Q9Y6Y1 1673 aa20.38■□□□□ 0.85
HDAC8-206ENST00000373571 TRPM3Q9HCF6 1732 aaPredicted RBP20.38■□□□□ 0.85
HDAC8-206ENST00000373571 KLHL40Q2TBA0 621 aa20.38■□□□□ 0.85
HDAC8-206ENST00000373571 MCTP1Q6DN14 999 aa20.38■□□□□ 0.85
HDAC8-206ENST00000373571 DDX49Q9Y6V7 483 aaKnown RBP20.38■□□□□ 0.85
HDAC8-206ENST00000373571 MCM2P49736 904 aa20.37■□□□□ 0.85
HDAC8-206ENST00000373571 GAS2L3Q86XJ1 694 aa20.37■□□□□ 0.85
HDAC8-206ENST00000373571 PI4K2BQ8TCG2 481 aa20.36■□□□□ 0.85
HDAC8-206ENST00000373571 TMX3Q96JJ7 454 aa20.36■□□□□ 0.85
HDAC8-206ENST00000373571 GIGYF1O75420 1035 aaPredicted RBP20.35■□□□□ 0.85
HDAC8-206ENST00000373571 MAP4K4O95819 1239 aaPredicted RBP20.35■□□□□ 0.85
HDAC8-206ENST00000373571 AXIN2Q9Y2T1 843 aa20.35■□□□□ 0.85
HDAC8-206ENST00000373571 HSP90AB4PQ58FF6 505 aa20.34■□□□□ 0.85
HDAC8-206ENST00000373571 KRT28Q7Z3Y7 464 aa20.34■□□□□ 0.85
HDAC8-206ENST00000373571 MAP3K2Q9Y2U5 619 aa20.34■□□□□ 0.85
HDAC8-206ENST00000373571 SIPA1L3O60292 1781 aaPredicted RBP20.34■□□□□ 0.85
HDAC8-206ENST00000373571 HEG1Q9ULI3 1381 aa20.34■□□□□ 0.85
HDAC8-206ENST00000373571 IL25Q9H293 177 aa20.33■□□□□ 0.85
HDAC8-206ENST00000373571 ZDHHC9Q9Y397 364 aa20.33■□□□□ 0.85
HDAC8-206ENST00000373571 EPB41L2O43491 1005 aaKnown RBP20.33■□□□□ 0.84
HDAC8-206ENST00000373571 PROSER3Q2NL68 480 aa20.33■□□□□ 0.84
HDAC8-206ENST00000373571 IL17RAQ96F46 866 aa20.33■□□□□ 0.84
HDAC8-206ENST00000373571 RGPD5Q99666 1765 aa20.33■□□□□ 0.84
HDAC8-206ENST00000373571 KIF1AQ12756 1690 aa20.32■□□□□ 0.84
HDAC8-206ENST00000373571 RRAGDQ9NQL2 400 aaPredicted RBP20.32■□□□□ 0.84
HDAC8-206ENST00000373571 LMBRD1Q9NUN5 540 aa20.32■□□□□ 0.84
HDAC8-206ENST00000373571 PRAMEF22A3QJZ6 481 aa20.32■□□□□ 0.84
HDAC8-206ENST00000373571 ALDH1L1O75891 902 aa20.32■□□□□ 0.84
HDAC8-206ENST00000373571 OS9Q13438 667 aaPredicted RBP20.32■□□□□ 0.84
HDAC8-206ENST00000373571 KSR2Q6VAB6 950 aa20.32■□□□□ 0.84
HDAC8-206ENST00000373571 C9orf78Q9NZ63 289 aaPredicted RBP20.32■□□□□ 0.84
HDAC8-206ENST00000373571 MTX1Q13505 466 aa20.31■□□□□ 0.84
HDAC8-206ENST00000373571 PROSER2Q86WR7 435 aaPredicted RBP20.31■□□□□ 0.84
HDAC8-206ENST00000373571 CNTROBQ8N137 903 aa20.31■□□□□ 0.84
HDAC8-206ENST00000373571 CUL4AQ13619 759 aa20.3■□□□□ 0.84
HDAC8-206ENST00000373571 ADAMTS7Q9UKP4 1686 aa20.3■□□□□ 0.84
HDAC8-206ENST00000373571 C1orf167Q5SNV9 1468 aa20.3■□□□□ 0.84
HDAC8-206ENST00000373571 HSPA4P34932 840 aa20.3■□□□□ 0.84
HDAC8-206ENST00000373571 NOL8Q76FK4 1167 aaKnown RBP20.3■□□□□ 0.84
HDAC8-206ENST00000373571 LMTK3Q96Q04 1460 aa20.29■□□□□ 0.84
HDAC8-206ENST00000373571 CRYBG1Q9Y4K1 1723 aa20.29■□□□□ 0.84
HDAC8-206ENST00000373571 ERBB3P21860 1342 aa20.29■□□□□ 0.84
HDAC8-206ENST00000373571 USP42Q9H9J4 1324 aaKnown RBP20.29■□□□□ 0.84
HDAC8-206ENST00000373571 SGSM2O43147 1006 aa20.29■□□□□ 0.84
HDAC8-206ENST00000373571 UPF3BQ9BZI7 483 aaKnown RBP20.29■□□□□ 0.84
HDAC8-206ENST00000373571 HYPKQ9NX55 129 aa20.29■□□□□ 0.84
HDAC8-206ENST00000373571 TTC41PQ6P2S7 1318 aa20.28■□□□□ 0.84
HDAC8-206ENST00000373571 NCLP19338 710 aaKnown RBP20.28■□□□□ 0.84
HDAC8-206ENST00000373571 CWF19L2Q2TBE0 894 aaKnown RBP20.28■□□□□ 0.84
HDAC8-206ENST00000373571 RAD50Q92878 1312 aa20.28■□□□□ 0.84
HDAC8-206ENST00000373571 INTS4Q96HW7 963 aaKnown RBP20.27■□□□□ 0.84
HDAC8-206ENST00000373571 ALS2Q96Q42 1657 aa20.27■□□□□ 0.84
HDAC8-206ENST00000373571 PRPF40AO75400 957 aaKnown RBP20.27■□□□□ 0.84
HDAC8-206ENST00000373571 ZC3H6P61129 1189 aaKnown RBP20.27■□□□□ 0.84
HDAC8-206ENST00000373571 CAVIN1Q6NZI2 390 aaKnown RBP20.27■□□□□ 0.84
HDAC8-206ENST00000373571 CLASRPQ8N2M8 674 aaKnown RBP20.27■□□□□ 0.84
HDAC8-206ENST00000373571 HDAC5Q9UQL6 1122 aa20.27■□□□□ 0.84
HDAC8-206ENST00000373571 GLRX3O76003 335 aaKnown RBP20.26■□□□□ 0.83
HDAC8-206ENST00000373571 MST1RQ04912 1400 aa20.26■□□□□ 0.83
HDAC8-206ENST00000373571 DDX58O95786 925 aaKnown RBP20.25■□□□□ 0.83
HDAC8-206ENST00000373571 FOXD4L5Q5VV16 416 aaPredicted RBP20.25■□□□□ 0.83
HDAC8-206ENST00000373571 FOXD4L4Q8WXT5 416 aaPredicted RBP20.25■□□□□ 0.83
HDAC8-206ENST00000373571 LSG1Q9H089 658 aaKnown RBP20.25■□□□□ 0.83
HDAC8-206ENST00000373571 C19orf44Q9H6X5 657 aa20.25■□□□□ 0.83
HDAC8-206ENST00000373571 DDX21Q9NR30 783 aaKnown RBP eCLIP20.25■□□□□ 0.83
HDAC8-206ENST00000373571 BRD1O95696 1058 aa20.24■□□□□ 0.83
HDAC8-206ENST00000373571 ZNF445P59923 1031 aa20.24■□□□□ 0.83
HDAC8-206ENST00000373571 ERC1Q8IUD2 1116 aa20.24■□□□□ 0.83
HDAC8-206ENST00000373571 LINS1Q8NG48 757 aa20.24■□□□□ 0.83
HDAC8-206ENST00000373571 PA2G4Q9UQ80 394 aaKnown RBP20.24■□□□□ 0.83
HDAC8-206ENST00000373571 AIMP1Q12904 312 aaKnown RBP20.24■□□□□ 0.83
HDAC8-206ENST00000373571 ZSCAN23Q3MJ62 389 aa20.24■□□□□ 0.83
HDAC8-206ENST00000373571 CWC27Q6UX04 472 aaKnown RBP20.24■□□□□ 0.83
HDAC8-206ENST00000373571 RAPGEF4Q8WZA2 1011 aa20.24■□□□□ 0.83
HDAC8-206ENST00000373571 CHAMP1Q96JM3 812 aa20.24■□□□□ 0.83
HDAC8-206ENST00000373571 GRM8O00222 908 aa20.23■□□□□ 0.83
HDAC8-206ENST00000373571 KIAA1211Q6ZU35 1233 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms