RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 SOS1Q07889 1333 aaPredicted RBP11.61□□□□□ -0.55
SCAF11-202ENST00000369367 CCDC178Q5BJE1 867 aa11.61□□□□□ -0.55
SCAF11-202ENST00000369367 PAF1Q8N7H5 531 aa11.61□□□□□ -0.55
SCAF11-202ENST00000369367 MIS18AQ9NYP9 233 aa11.61□□□□□ -0.55
SCAF11-202ENST00000369367 ANKRD13DQ6ZTN6 518 aa11.61□□□□□ -0.55
SCAF11-202ENST00000369367 ANKRD18AQ8IVF6 992 aa11.6□□□□□ -0.55
SCAF11-202ENST00000369367 RAB34Q9BZG1 259 aa11.6□□□□□ -0.55
SCAF11-202ENST00000369367 MYO6Q9UM54 1294 aa11.6□□□□□ -0.55
SCAF11-202ENST00000369367 DCAF5Q96JK2 942 aa11.6□□□□□ -0.55
SCAF11-202ENST00000369367 GPTP24298 496 aa11.6□□□□□ -0.55
SCAF11-202ENST00000369367 TFCP2L1Q9NZI6 479 aa11.6□□□□□ -0.55
SCAF11-202ENST00000369367 CEP170Q5SW79 1584 aa11.6□□□□□ -0.55
SCAF11-202ENST00000369367 EYA3Q99504 573 aa11.6□□□□□ -0.55
SCAF11-202ENST00000369367 CDR1P51861 262 aa11.6□□□□□ -0.55
SCAF11-202ENST00000369367 NAP1L1P55209 391 aaKnown RBP11.6□□□□□ -0.55
SCAF11-202ENST00000369367 FEZ1Q99689 392 aa11.6□□□□□ -0.55
SCAF11-202ENST00000369367 ZFYVE27Q5T4F4 411 aa11.6□□□□□ -0.55
SCAF11-202ENST00000369367 CFAP45Q9UL16 551 aa11.6□□□□□ -0.55
SCAF11-202ENST00000369367 WDR33Q9C0J8 1336 aaKnown RBP11.6□□□□□ -0.55
SCAF11-202ENST00000369367 CCDC12Q8WUD4 166 aaPredicted RBP11.59□□□□□ -0.55
SCAF11-202ENST00000369367 JDP2Q8WYK2 163 aa11.59□□□□□ -0.55
SCAF11-202ENST00000369367 NPATQ14207 1427 aa11.59□□□□□ -0.55
SCAF11-202ENST00000369367 PHAXQ9H814 394 aaKnown RBP11.59□□□□□ -0.55
SCAF11-202ENST00000369367 MX1P20591 662 aa11.59□□□□□ -0.55
SCAF11-202ENST00000369367 ATP7AQ04656 1500 aa11.59□□□□□ -0.55
SCAF11-202ENST00000369367 PDE4BQ07343 736 aa11.59□□□□□ -0.55
SCAF11-202ENST00000369367 GCP02774 474 aa11.59□□□□□ -0.55
SCAF11-202ENST00000369367 IL1RAPL2Q9NP60 686 aa11.59□□□□□ -0.55
SCAF11-202ENST00000369367 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.59□□□□□ -0.55
SCAF11-202ENST00000369367 ZFYVE9O95405 1425 aa11.59□□□□□ -0.55
SCAF11-202ENST00000369367 NKTRP30414 1462 aaKnown RBP11.59□□□□□ -0.55
SCAF11-202ENST00000369367 ZFYVE16Q7Z3T8 1539 aa11.58□□□□□ -0.55
SCAF11-202ENST00000369367 DCTN1Q14203 1278 aa11.58□□□□□ -0.55
SCAF11-202ENST00000369367 MAP3K2Q9Y2U5 619 aa11.58□□□□□ -0.56
SCAF11-202ENST00000369367 TCOF1Q13428 1488 aaKnown RBP11.58□□□□□ -0.56
SCAF11-202ENST00000369367 HOMER1Q86YM7 354 aa11.58□□□□□ -0.56
SCAF11-202ENST00000369367 TMEM57Q8N5G2 664 aa11.58□□□□□ -0.56
SCAF11-202ENST00000369367 PDCL3Q9H2J4 239 aa11.58□□□□□ -0.56
SCAF11-202ENST00000369367 KRT85P78386 507 aa11.58□□□□□ -0.56
SCAF11-202ENST00000369367 PDRG1Q9NUG6 133 aa11.58□□□□□ -0.56
SCAF11-202ENST00000369367 ABCC1P33527 1531 aa11.58□□□□□ -0.56
SCAF11-202ENST00000369367 ZNHIT6Q9NWK9 470 aaKnown RBP11.58□□□□□ -0.56
SCAF11-202ENST00000369367 MINDY4BA8MYZ0 360 aa11.58□□□□□ -0.56
SCAF11-202ENST00000369367 ALDH1L1O75891 902 aa11.58□□□□□ -0.56
SCAF11-202ENST00000369367 KIF5BP33176 963 aa11.57□□□□□ -0.56
SCAF11-202ENST00000369367 THUMPD2Q9BTF0 503 aaKnown RBP11.57□□□□□ -0.56
SCAF11-202ENST00000369367 B4DLN1 442 aa11.57□□□□□ -0.56
SCAF11-202ENST00000369367 MRPL12P52815 198 aaKnown RBP11.57□□□□□ -0.56
SCAF11-202ENST00000369367 CWC27Q6UX04 472 aaKnown RBP11.57□□□□□ -0.56
SCAF11-202ENST00000369367 CCAR2Q8N163 923 aaKnown RBP11.57□□□□□ -0.56
SCAF11-202ENST00000369367 FANCIQ9NVI1 1328 aa11.57□□□□□ -0.56
SCAF11-202ENST00000369367 PPP1R12BO60237 982 aaPredicted RBP11.57□□□□□ -0.56
SCAF11-202ENST00000369367 CCDC96Q2M329 555 aa11.57□□□□□ -0.56
SCAF11-202ENST00000369367 UTP14AQ9BVJ6 771 aaKnown RBP11.57□□□□□ -0.56
SCAF11-202ENST00000369367 ZNF804AQ7Z570 1209 aa11.57□□□□□ -0.56
SCAF11-202ENST00000369367 CRNKL1Q9BZJ0 848 aaKnown RBP11.57□□□□□ -0.56
SCAF11-202ENST00000369367 SMC2O95347 1197 aa11.57□□□□□ -0.56
SCAF11-202ENST00000369367 CCP110O43303 1012 aa11.56□□□□□ -0.56
SCAF11-202ENST00000369367 SSH1Q8WYL5 1049 aa11.56□□□□□ -0.56
SCAF11-202ENST00000369367 IP6K1Q92551 441 aa11.56□□□□□ -0.56
SCAF11-202ENST00000369367 ABCA5Q8WWZ7 1642 aa11.56□□□□□ -0.56
SCAF11-202ENST00000369367 ZNF213O14771 459 aa11.56□□□□□ -0.56
SCAF11-202ENST00000369367 ZFYP08048 801 aaPredicted RBP11.56□□□□□ -0.56
SCAF11-202ENST00000369367 ZNF219Q9P2Y4 722 aaPredicted RBP11.56□□□□□ -0.56
SCAF11-202ENST00000369367 PLCG2P16885 1265 aa11.56□□□□□ -0.56
SCAF11-202ENST00000369367 BAG6P46379 1132 aa11.56□□□□□ -0.56
SCAF11-202ENST00000369367 WDR78Q5VTH9 848 aa11.56□□□□□ -0.56
SCAF11-202ENST00000369367 EXOC6BQ9Y2D4 811 aa11.56□□□□□ -0.56
SCAF11-202ENST00000369367 YTHDC2Q9H6S0 1430 aaKnown RBP11.56□□□□□ -0.56
SCAF11-202ENST00000369367 LARP1BQ659C4 914 aaKnown RBP11.56□□□□□ -0.56
SCAF11-202ENST00000369367 UBE3BQ7Z3V4 1068 aa11.56□□□□□ -0.56
SCAF11-202ENST00000369367 JAKMIP1Q96N16 626 aaKnown RBP11.56□□□□□ -0.56
SCAF11-202ENST00000369367 ZHX3Q9H4I2 956 aa11.56□□□□□ -0.56
SCAF11-202ENST00000369367 LMOD1P29536 600 aaPredicted RBP11.56□□□□□ -0.56
SCAF11-202ENST00000369367 DEKP35659 375 aaKnown RBP11.56□□□□□ -0.56
SCAF11-202ENST00000369367 ACSBG1Q96GR2 724 aa11.55□□□□□ -0.56
SCAF11-202ENST00000369367 ANKRD2Q9GZV1 360 aa11.55□□□□□ -0.56
SCAF11-202ENST00000369367 ASXL1Q8IXJ9 1541 aa11.55□□□□□ -0.56
SCAF11-202ENST00000369367 CATIPQ7Z7H3 387 aa11.55□□□□□ -0.56
SCAF11-202ENST00000369367 STK11IPQ8N1F8 1099 aa11.55□□□□□ -0.56
SCAF11-202ENST00000369367 ZC3H12CQ9C0D7 883 aaKnown RBP11.55□□□□□ -0.56
SCAF11-202ENST00000369367 HSP90AB2PQ58FF8 381 aa11.55□□□□□ -0.56
SCAF11-202ENST00000369367 ARHGAP45Q92619 1136 aa11.55□□□□□ -0.56
SCAF11-202ENST00000369367 EVI5LQ96CN4 794 aa11.55□□□□□ -0.56
SCAF11-202ENST00000369367 SPINK5Q9NQ38 1064 aaPredicted RBP11.55□□□□□ -0.56
SCAF11-202ENST00000369367 BTG4Q9NY30 223 aa11.55□□□□□ -0.56
SCAF11-202ENST00000369367 NIP7Q9Y221 180 aaKnown RBP eCLIP11.55□□□□□ -0.56
SCAF11-202ENST00000369367 RARSP54136 660 aaKnown RBP11.55□□□□□ -0.56
SCAF11-202ENST00000369367 TRAPPC3LQ5T215 181 aa11.55□□□□□ -0.56
SCAF11-202ENST00000369367 KIF20AO95235 890 aa11.55□□□□□ -0.56
SCAF11-202ENST00000369367 SLAIN2Q9P270 581 aa11.55□□□□□ -0.56
SCAF11-202ENST00000369367 LRRFIP2Q9Y608 721 aaKnown RBP11.55□□□□□ -0.56
SCAF11-202ENST00000369367 PIK3C2GO75747 1445 aa11.54□□□□□ -0.56
SCAF11-202ENST00000369367 TMEM266Q2M3C6 531 aa11.54□□□□□ -0.56
SCAF11-202ENST00000369367 ECHDC1Q9NTX5 307 aa11.54□□□□□ -0.56
SCAF11-202ENST00000369367 ME1P48163 572 aa11.54□□□□□ -0.56
SCAF11-202ENST00000369367 PLEKHH1Q9ULM0 1364 aa11.54□□□□□ -0.56
SCAF11-202ENST00000369367 SIRT1Q96EB6 747 aa11.54□□□□□ -0.56
SCAF11-202ENST00000369367 MAGI2Q86UL8 1455 aa11.54□□□□□ -0.56
SCAF11-202ENST00000369367 BABAM1Q9NWV8 329 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms