RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 KCNQ2O43526 872 aa20.25■□□□□ 0.83
LMNA-203ENST00000368297 API5Q9BZZ5 524 aaKnown RBP20.25■□□□□ 0.83
LMNA-203ENST00000368297 G2E3Q7L622 706 aa20.24■□□□□ 0.83
LMNA-203ENST00000368297 KRT27Q7Z3Y8 459 aa20.24■□□□□ 0.83
LMNA-203ENST00000368297 DBF4Q9UBU7 674 aaPredicted RBP20.24■□□□□ 0.83
LMNA-203ENST00000368297 PTPRCP08575 1304 aa20.24■□□□□ 0.83
LMNA-203ENST00000368297 NHSQ6T4R5 1651 aa20.23■□□□□ 0.83
LMNA-203ENST00000368297 USP16Q9Y5T5 823 aa20.23■□□□□ 0.83
LMNA-203ENST00000368297 RLBP1P12271 317 aa20.22■□□□□ 0.83
LMNA-203ENST00000368297 RGS17Q9UGC6 210 aaPredicted RBP20.22■□□□□ 0.83
LMNA-203ENST00000368297 COG6Q9Y2V7 657 aa20.22■□□□□ 0.83
LMNA-203ENST00000368297 CCDC136Q96JN2 1154 aa20.22■□□□□ 0.83
LMNA-203ENST00000368297 ANXA1P04083 346 aa20.21■□□□□ 0.83
LMNA-203ENST00000368297 FLIIQ13045 1269 aa20.21■□□□□ 0.83
LMNA-203ENST00000368297 VSIG10Q8N0Z9 540 aa20.21■□□□□ 0.83
LMNA-203ENST00000368297 SMARCC1Q92922 1105 aaPredicted RBP20.21■□□□□ 0.83
LMNA-203ENST00000368297 FKBP5Q13451 457 aaPredicted RBP20.2■□□□□ 0.82
LMNA-203ENST00000368297 B4GALNT3Q6L9W6 998 aa20.2■□□□□ 0.82
LMNA-203ENST00000368297 PHAXQ9H814 394 aaKnown RBP20.2■□□□□ 0.82
LMNA-203ENST00000368297 DDX21Q9NR30 783 aaKnown RBP eCLIP20.2■□□□□ 0.82
LMNA-203ENST00000368297 SBF2Q86WG5 1849 aa20.2■□□□□ 0.82
LMNA-203ENST00000368297 POTEAQ6S8J7 498 aa20.19■□□□□ 0.82
LMNA-203ENST00000368297 TEX13AQ9BXU3 409 aaPredicted RBP20.19■□□□□ 0.82
LMNA-203ENST00000368297 HYPKQ9NX55 129 aa20.19■□□□□ 0.82
LMNA-203ENST00000368297 BTAF1O14981 1849 aa20.19■□□□□ 0.82
LMNA-203ENST00000368297 PROSER3Q2NL68 480 aa20.19■□□□□ 0.82
LMNA-203ENST00000368297 ITPRIPQ8IWB1 547 aa20.19■□□□□ 0.82
LMNA-203ENST00000368297 DNAJC10Q8IXB1 793 aa20.19■□□□□ 0.82
LMNA-203ENST00000368297 TMEM57Q8N5G2 664 aa20.19■□□□□ 0.82
LMNA-203ENST00000368297 PALLDQ8WX93 1383 aa20.19■□□□□ 0.82
LMNA-203ENST00000368297 MYL6BP14649 208 aa20.18■□□□□ 0.82
LMNA-203ENST00000368297 MVPQ14764 893 aaKnown RBP20.18■□□□□ 0.82
LMNA-203ENST00000368297 FAM196AQ6ZSG2 479 aa20.18■□□□□ 0.82
LMNA-203ENST00000368297 ABCC4O15439 1325 aa20.17■□□□□ 0.82
LMNA-203ENST00000368297 RGS12O14924 1447 aa20.17■□□□□ 0.82
LMNA-203ENST00000368297 ERBB4Q15303 1308 aa20.16■□□□□ 0.82
LMNA-203ENST00000368297 PDIA6Q15084 440 aa20.16■□□□□ 0.82
LMNA-203ENST00000368297 PTF1AQ7RTS3 328 aa20.16■□□□□ 0.82
LMNA-203ENST00000368297 TJP1Q07157 1748 aa20.16■□□□□ 0.82
LMNA-203ENST00000368297 STARD3NLO95772 234 aa20.16■□□□□ 0.82
LMNA-203ENST00000368297 PIP4K2AP48426 406 aaPredicted RBP20.16■□□□□ 0.82
LMNA-203ENST00000368297 SLC4A9Q96Q91 983 aa20.16■□□□□ 0.82
LMNA-203ENST00000368297 LOC102724428A0A0B4J2F2 783 aa20.15■□□□□ 0.82
LMNA-203ENST00000368297 F6X3S4 739 aa20.15■□□□□ 0.82
LMNA-203ENST00000368297 A1BGP04217 495 aa20.15■□□□□ 0.82
LMNA-203ENST00000368297 SIK1P57059 783 aa20.15■□□□□ 0.82
LMNA-203ENST00000368297 SLC4A10Q6U841 1118 aa20.15■□□□□ 0.82
LMNA-203ENST00000368297 ATP6V1AP38606 617 aa20.14■□□□□ 0.81
LMNA-203ENST00000368297 AIMP1Q12904 312 aaKnown RBP20.14■□□□□ 0.81
LMNA-203ENST00000368297 ILDR1Q86SU0 546 aaPredicted RBP20.14■□□□□ 0.81
LMNA-203ENST00000368297 DDX19BQ9UMR2 479 aa20.14■□□□□ 0.81
LMNA-203ENST00000368297 BCL11BQ9C0K0 894 aaPredicted RBP20.13■□□□□ 0.81
LMNA-203ENST00000368297 DDX58O95786 925 aaKnown RBP20.13■□□□□ 0.81
LMNA-203ENST00000368297 NBPF26B4DH59 902 aa20.12■□□□□ 0.81
LMNA-203ENST00000368297 NBPF14Q5TI25 921 aa20.12■□□□□ 0.81
LMNA-203ENST00000368297 NBPF10Q6P3W6 841 aaKnown RBP20.12■□□□□ 0.81
LMNA-203ENST00000368297 NBPF15Q8N660 670 aa20.12■□□□□ 0.81
LMNA-203ENST00000368297 XAGE3Q8WTP9 111 aa20.12■□□□□ 0.81
LMNA-203ENST00000368297 CYP19A1P11511 503 aaPredicted RBP20.11■□□□□ 0.81
LMNA-203ENST00000368297 INTS3Q68E01 1043 aaKnown RBP20.11■□□□□ 0.81
LMNA-203ENST00000368297 COPS6Q7L5N1 327 aa20.11■□□□□ 0.81
LMNA-203ENST00000368297 CICQ96RK0 1608 aaPredicted RBP20.1■□□□□ 0.81
LMNA-203ENST00000368297 CCT4P50991 539 aaKnown RBP20.1■□□□□ 0.81
LMNA-203ENST00000368297 PI4KAP2A4QPH2 592 aa20.1■□□□□ 0.81
LMNA-203ENST00000368297 TRIM37O94972 964 aa20.1■□□□□ 0.81
LMNA-203ENST00000368297 PI4KAP1Q8N8J0 262 aa20.1■□□□□ 0.81
LMNA-203ENST00000368297 DNAAF4Q8WXU2 420 aa20.1■□□□□ 0.81
LMNA-203ENST00000368297 CHMP4BQ9H444 224 aaKnown RBP20.1■□□□□ 0.81
LMNA-203ENST00000368297 ZNF330Q9Y3S2 320 aaPredicted RBP20.1■□□□□ 0.81
LMNA-203ENST00000368297 ZNF831Q5JPB2 1677 aa20.09■□□□□ 0.81
LMNA-203ENST00000368297 PXDNLA1KZ92 1463 aa20.09■□□□□ 0.81
LMNA-203ENST00000368297 AAMPQ13685 434 aa20.09■□□□□ 0.81
LMNA-203ENST00000368297 KSR2Q6VAB6 950 aa20.09■□□□□ 0.81
LMNA-203ENST00000368297 ADCY9O60503 1353 aa20.08■□□□□ 0.81
LMNA-203ENST00000368297 ITPK1Q13572 414 aa20.08■□□□□ 0.81
LMNA-203ENST00000368297 LRP10Q7Z4F1 713 aa20.08■□□□□ 0.81
LMNA-203ENST00000368297 RIC3Q7Z5B4 369 aa20.08■□□□□ 0.81
LMNA-203ENST00000368297 MAP3K2Q9Y2U5 619 aa20.08■□□□□ 0.81
LMNA-203ENST00000368297 N4BP2Q86UW6 1770 aaPredicted RBP20.07■□□□□ 0.8
LMNA-203ENST00000368297 LY75O60449 1722 aa20.07■□□□□ 0.8
LMNA-203ENST00000368297 CCDC87Q9NVE4 849 aa20.07■□□□□ 0.8
LMNA-203ENST00000368297 COL5A3P25940 1745 aaPredicted RBP20.06■□□□□ 0.8
LMNA-203ENST00000368297 ANKRD13DQ6ZTN6 518 aa20.06■□□□□ 0.8
LMNA-203ENST00000368297 CCNL1Q9UK58 526 aaPredicted RBP20.06■□□□□ 0.8
LMNA-203ENST00000368297 ZBTB1Q9Y2K1 713 aa20.06■□□□□ 0.8
LMNA-203ENST00000368297 ZBTB7BO15156 539 aaPredicted RBP20.05■□□□□ 0.8
LMNA-203ENST00000368297 CRKLP46109 303 aaKnown RBP20.05■□□□□ 0.8
LMNA-203ENST00000368297 KCNQ4P56696 695 aa20.05■□□□□ 0.8
LMNA-203ENST00000368297 NPM2Q86SE8 214 aaKnown RBP20.05■□□□□ 0.8
LMNA-203ENST00000368297 SRCIN1Q9C0H9 1055 aa20.05■□□□□ 0.8
LMNA-203ENST00000368297 TTLL7Q6ZT98 887 aa20.04■□□□□ 0.8
LMNA-203ENST00000368297 ARXQ96QS3 562 aa20.04■□□□□ 0.8
LMNA-203ENST00000368297 LINC00116Q8NCU8 138 aa20.03■□□□□ 0.8
LMNA-203ENST00000368297 PLBD2Q8NHP8 589 aa20.03■□□□□ 0.8
LMNA-203ENST00000368297 ZBTB40Q9NUA8 1239 aa20.03■□□□□ 0.8
LMNA-203ENST00000368297 ARFGEF2Q9Y6D5 1785 aa20.03■□□□□ 0.8
LMNA-203ENST00000368297 RREB1Q92766 1687 aa20.03■□□□□ 0.8
LMNA-203ENST00000368297 ATP10DQ9P241 1426 aa20.03■□□□□ 0.8
LMNA-203ENST00000368297 NEXNQ0ZGT2 675 aa20.03■□□□□ 0.8
LMNA-203ENST00000368297 INTS5Q6P9B9 1019 aaKnown RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms