RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 ANXA1P04083 346 aa12.72□□□□□ -0.37
PTPRK-205ENST00000368213 NAP1L1P55209 391 aaKnown RBP12.72□□□□□ -0.37
PTPRK-205ENST00000368213 JARID2Q92833 1246 aaPredicted RBP12.72□□□□□ -0.37
PTPRK-205ENST00000368213 CCDC8Q9H0W5 538 aaPredicted RBP12.72□□□□□ -0.37
PTPRK-205ENST00000368213 ZRANB1Q9UGI0 708 aa12.72□□□□□ -0.37
PTPRK-205ENST00000368213 FLT4P35916 1363 aa12.72□□□□□ -0.37
PTPRK-205ENST00000368213 SSBP05455 408 aaKnown RBP eCLIP12.72□□□□□ -0.37
PTPRK-205ENST00000368213 NFATC2IPQ8NCF5 419 aa12.72□□□□□ -0.37
PTPRK-205ENST00000368213 PI4KAP2A4QPH2 592 aa12.72□□□□□ -0.37
PTPRK-205ENST00000368213 GSTO1P78417 241 aa12.72□□□□□ -0.37
PTPRK-205ENST00000368213 CHD1LQ86WJ1 897 aa12.72□□□□□ -0.37
PTPRK-205ENST00000368213 PI4KAP1Q8N8J0 262 aa12.72□□□□□ -0.37
PTPRK-205ENST00000368213 XAGE3Q8WTP9 111 aa12.72□□□□□ -0.37
PTPRK-205ENST00000368213 DDX17Q92841 729 aaKnown RBP12.72□□□□□ -0.37
PTPRK-205ENST00000368213 PIK3R4Q99570 1358 aa12.71□□□□□ -0.37
PTPRK-205ENST00000368213 GLRX3O76003 335 aaKnown RBP12.71□□□□□ -0.37
PTPRK-205ENST00000368213 KRT32Q14532 448 aa12.71□□□□□ -0.37
PTPRK-205ENST00000368213 CUL5Q93034 780 aa12.71□□□□□ -0.37
PTPRK-205ENST00000368213 DCAF5Q96JK2 942 aa12.71□□□□□ -0.37
PTPRK-205ENST00000368213 MCM2P49736 904 aa12.71□□□□□ -0.37
PTPRK-205ENST00000368213 DISP3Q9P2K9 1392 aa12.71□□□□□ -0.37
PTPRK-205ENST00000368213 NEO1Q92859 1461 aa12.71□□□□□ -0.37
PTPRK-205ENST00000368213 ZC3H12CQ9C0D7 883 aaKnown RBP12.71□□□□□ -0.38
PTPRK-205ENST00000368213 ARHGEF10O15013 1369 aa12.71□□□□□ -0.38
PTPRK-205ENST00000368213 SLFN5Q08AF3 891 aa12.71□□□□□ -0.38
PTPRK-205ENST00000368213 JMYQ8N9B5 988 aa12.71□□□□□ -0.38
PTPRK-205ENST00000368213 ABCC1P33527 1531 aa12.7□□□□□ -0.38
PTPRK-205ENST00000368213 COPS6Q7L5N1 327 aa12.7□□□□□ -0.38
PTPRK-205ENST00000368213 CCAR2Q8N163 923 aaKnown RBP12.7□□□□□ -0.38
PTPRK-205ENST00000368213 TMEM87AQ8NBN3 555 aa12.7□□□□□ -0.38
PTPRK-205ENST00000368213 RPRD2Q5VT52 1461 aaKnown RBP12.7□□□□□ -0.38
PTPRK-205ENST00000368213 FANCIQ9NVI1 1328 aa12.7□□□□□ -0.38
PTPRK-205ENST00000368213 NPATQ14207 1427 aa12.7□□□□□ -0.38
PTPRK-205ENST00000368213 CEBPZQ03701 1054 aaKnown RBP12.7□□□□□ -0.38
PTPRK-205ENST00000368213 EIF4A2Q14240 407 aaKnown RBP12.7□□□□□ -0.38
PTPRK-205ENST00000368213 TTF1Q15361 905 aaPredicted RBP12.7□□□□□ -0.38
PTPRK-205ENST00000368213 CCDC70Q6NSX1 233 aa12.7□□□□□ -0.38
PTPRK-205ENST00000368213 ZNF804AQ7Z570 1209 aa12.7□□□□□ -0.38
PTPRK-205ENST00000368213 IQCA1Q86XH1 822 aa12.7□□□□□ -0.38
PTPRK-205ENST00000368213 SSH1Q8WYL5 1049 aa12.7□□□□□ -0.38
PTPRK-205ENST00000368213 U3KPZ7 1027 aaPredicted RBP12.7□□□□□ -0.38
PTPRK-205ENST00000368213 WDR97A6NE52 1622 aa12.7□□□□□ -0.38
PTPRK-205ENST00000368213 PTPRCP08575 1304 aa12.7□□□□□ -0.38
PTPRK-205ENST00000368213 RTN4Q9NQC3 1192 aaKnown RBP12.7□□□□□ -0.38
PTPRK-205ENST00000368213 CHMP5Q9NZZ3 219 aa12.7□□□□□ -0.38
PTPRK-205ENST00000368213 PIP4K2AP48426 406 aaPredicted RBP12.69□□□□□ -0.38
PTPRK-205ENST00000368213 SYCP1Q15431 976 aa12.69□□□□□ -0.38
PTPRK-205ENST00000368213 WASF1Q92558 559 aa12.69□□□□□ -0.38
PTPRK-205ENST00000368213 EYA3Q99504 573 aa12.69□□□□□ -0.38
PTPRK-205ENST00000368213 VEZTQ9HBM0 779 aa12.69□□□□□ -0.38
PTPRK-205ENST00000368213 ATP7AQ04656 1500 aa12.69□□□□□ -0.38
PTPRK-205ENST00000368213 IP6K1Q92551 441 aa12.69□□□□□ -0.38
PTPRK-205ENST00000368213 BMP2KQ9NSY1 1161 aaPredicted RBP12.69□□□□□ -0.38
PTPRK-205ENST00000368213 CHPF2Q9P2E5 772 aa12.69□□□□□ -0.38
PTPRK-205ENST00000368213 MAGEC2Q9UBF1 373 aaPredicted RBP12.69□□□□□ -0.38
PTPRK-205ENST00000368213 GJA3Q9Y6H8 435 aa12.69□□□□□ -0.38
PTPRK-205ENST00000368213 JAKMIP1Q96N16 626 aaKnown RBP12.69□□□□□ -0.38
PTPRK-205ENST00000368213 YTHDC2Q9H6S0 1430 aaKnown RBP12.68□□□□□ -0.38
PTPRK-205ENST00000368213 PPP4R3AQ6IN85 833 aa12.68□□□□□ -0.38
PTPRK-205ENST00000368213 MX1P20591 662 aa12.68□□□□□ -0.38
PTPRK-205ENST00000368213 RABEP1Q15276 862 aa12.68□□□□□ -0.38
PTPRK-205ENST00000368213 CTCFLQ8NI51 663 aaPredicted RBP12.68□□□□□ -0.38
PTPRK-205ENST00000368213 RNF41Q9H4P4 317 aaPredicted RBP12.68□□□□□ -0.38
PTPRK-205ENST00000368213 NSFL1CQ9UNZ2 370 aaKnown RBP12.68□□□□□ -0.38
PTPRK-205ENST00000368213 SPDYE4A6NLX3 237 aa12.68□□□□□ -0.38
PTPRK-205ENST00000368213 ZNF772Q68DY9 489 aaPredicted RBP12.68□□□□□ -0.38
PTPRK-205ENST00000368213 ZGPATQ8N5A5 531 aaKnown RBP12.68□□□□□ -0.38
PTPRK-205ENST00000368213 GOLGA6L1Q8N7Z2 621 aa12.68□□□□□ -0.38
PTPRK-205ENST00000368213 RBM17Q96I25 401 aaKnown RBP12.68□□□□□ -0.38
PTPRK-205ENST00000368213 PDCL3Q9H2J4 239 aa12.68□□□□□ -0.38
PTPRK-205ENST00000368213 EHMT1Q9H9B1 1298 aa12.68□□□□□ -0.38
PTPRK-205ENST00000368213 MBIPQ9NS73 344 aa12.68□□□□□ -0.38
PTPRK-205ENST00000368213 HOXC9P31274 260 aa12.68□□□□□ -0.38
PTPRK-205ENST00000368213 CNBD1Q8NA66 436 aa12.68□□□□□ -0.38
PTPRK-205ENST00000368213 NAT10Q9H0A0 1025 aaKnown RBP12.68□□□□□ -0.38
PTPRK-205ENST00000368213 KINO60870 393 aaKnown RBP12.68□□□□□ -0.38
PTPRK-205ENST00000368213 GPR162Q16538 588 aa12.68□□□□□ -0.38
PTPRK-205ENST00000368213 SLC4A8Q2Y0W8 1093 aa12.68□□□□□ -0.38
PTPRK-205ENST00000368213 RIMBP2O15034 1052 aa12.67□□□□□ -0.38
PTPRK-205ENST00000368213 AEBP1Q8IUX7 1158 aa12.67□□□□□ -0.38
PTPRK-205ENST00000368213 DNAJC5Q9H3Z4 198 aa12.67□□□□□ -0.38
PTPRK-205ENST00000368213 QTRT2Q9H974 415 aaKnown RBP12.67□□□□□ -0.38
PTPRK-205ENST00000368213 PDRG1Q9NUG6 133 aa12.67□□□□□ -0.38
PTPRK-205ENST00000368213 MPHOSPH6Q99547 160 aaKnown RBP12.67□□□□□ -0.38
PTPRK-205ENST00000368213 SNRKQ9NRH2 765 aa12.67□□□□□ -0.38
PTPRK-205ENST00000368213 UQCRFS1P1P0C7P4 283 aa12.67□□□□□ -0.38
PTPRK-205ENST00000368213 RXRBP28702 533 aa12.67□□□□□ -0.38
PTPRK-205ENST00000368213 SMARCA5O60264 1052 aaPredicted RBP12.66□□□□□ -0.38
PTPRK-205ENST00000368213 DISP1Q96F81 1524 aa12.66□□□□□ -0.38
PTPRK-205ENST00000368213 CRNKL1Q9BZJ0 848 aaKnown RBP12.66□□□□□ -0.38
PTPRK-205ENST00000368213 TRPC5Q9UL62 973 aaPredicted RBP12.66□□□□□ -0.38
PTPRK-205ENST00000368213 TMEM2Q9UHN6 1383 aa12.66□□□□□ -0.38
PTPRK-205ENST00000368213 PDE4BQ07343 736 aa12.66□□□□□ -0.38
PTPRK-205ENST00000368213 ZNF213O14771 459 aa12.65□□□□□ -0.38
PTPRK-205ENST00000368213 BEGAINQ9BUH8 593 aa12.65□□□□□ -0.38
PTPRK-205ENST00000368213 IQSEC3Q9UPP2 1182 aaPredicted RBP12.65□□□□□ -0.38
PTPRK-205ENST00000368213 GOLIM4O00461 696 aa12.65□□□□□ -0.38
PTPRK-205ENST00000368213 VTI1AQ96AJ9 217 aa12.65□□□□□ -0.38
PTPRK-205ENST00000368213 CCDC87Q9NVE4 849 aa12.65□□□□□ -0.38
PTPRK-205ENST00000368213 KAT6BQ8WYB5 2073 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms