RNA–Protein interactions for RNA: ENST00000366892.5

PRKN-202, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,505 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-202ENST00000366892 FMNL2Q96PY5 1086 aa22.42■■□□□ 1.18
PRKN-202ENST00000366892 TEX13AQ9BXU3 409 aaPredicted RBP22.41■■□□□ 1.18
PRKN-202ENST00000366892 PARP3Q9Y6F1 533 aa22.41■■□□□ 1.18
PRKN-202ENST00000366892 UBR2Q8IWV8 1755 aa22.41■■□□□ 1.18
PRKN-202ENST00000366892 GRIN3BO60391 1043 aa22.41■■□□□ 1.18
PRKN-202ENST00000366892 ZPR1O75312 459 aa22.41■■□□□ 1.18
PRKN-202ENST00000366892 CANXP27824 592 aaKnown RBP22.41■■□□□ 1.18
PRKN-202ENST00000366892 SIPA1L3O60292 1781 aaPredicted RBP22.4■■□□□ 1.18
PRKN-202ENST00000366892 USPL1Q5W0Q7 1092 aa22.4■■□□□ 1.18
PRKN-202ENST00000366892 PNNQ9H307 717 aaKnown RBP22.4■■□□□ 1.18
PRKN-202ENST00000366892 NARFQ9UHQ1 456 aa22.39■■□□□ 1.17
PRKN-202ENST00000366892 C4AP0C0L4 1744 aa22.39■■□□□ 1.17
PRKN-202ENST00000366892 MYBBP1AQ9BQG0 1328 aaKnown RBP22.38■■□□□ 1.17
PRKN-202ENST00000366892 COL15A1P39059 1388 aa22.37■■□□□ 1.17
PRKN-202ENST00000366892 EIF5P55010 431 aaKnown RBP22.37■■□□□ 1.17
PRKN-202ENST00000366892 TAF7Q15545 349 aaPredicted RBP22.37■■□□□ 1.17
PRKN-202ENST00000366892 TM4SF1P30408 202 aa22.36■■□□□ 1.17
PRKN-202ENST00000366892 TGFB2P61812 414 aa22.36■■□□□ 1.17
PRKN-202ENST00000366892 DDR1Q08345 913 aa22.36■■□□□ 1.17
PRKN-202ENST00000366892 NFE2L2Q16236 605 aa22.36■■□□□ 1.17
PRKN-202ENST00000366892 WWC3Q9ULE0 1092 aa22.36■■□□□ 1.17
PRKN-202ENST00000366892 BCL2L12Q9HB09 334 aa22.35■■□□□ 1.17
PRKN-202ENST00000366892 MIS18AQ9NYP9 233 aa22.35■■□□□ 1.17
PRKN-202ENST00000366892 USP16Q9Y5T5 823 aa22.35■■□□□ 1.17
PRKN-202ENST00000366892 MAPK8IP3Q9UPT6 1336 aa22.34■■□□□ 1.17
PRKN-202ENST00000366892 A1BGP04217 495 aa22.34■■□□□ 1.17
PRKN-202ENST00000366892 C10orf71Q711Q0 1435 aa22.34■■□□□ 1.17
PRKN-202ENST00000366892 CHD4Q14839 1912 aa22.33■■□□□ 1.17
PRKN-202ENST00000366892 A0A0G2JLW4 131 aa22.33■■□□□ 1.17
PRKN-202ENST00000366892 PRAMEF22A3QJZ6 481 aa22.33■■□□□ 1.17
PRKN-202ENST00000366892 POLRMTO00411 1230 aaKnown RBP22.33■■□□□ 1.17
PRKN-202ENST00000366892 IL6STP40189 918 aaPredicted RBP22.33■■□□□ 1.17
PRKN-202ENST00000366892 ZNF784Q8NCA9 323 aaPredicted RBP22.33■■□□□ 1.17
PRKN-202ENST00000366892 A0A087WZG4 1122 aa22.32■■□□□ 1.16
PRKN-202ENST00000366892 SNRPA1P09661 255 aaKnown RBP22.32■■□□□ 1.16
PRKN-202ENST00000366892 PRKRIP1Q9H875 184 aaPredicted RBP22.32■■□□□ 1.16
PRKN-202ENST00000366892 PXDNLA1KZ92 1463 aa22.32■■□□□ 1.16
PRKN-202ENST00000366892 NFIXQ14938 502 aa22.31■■□□□ 1.16
PRKN-202ENST00000366892 DPEP1P16444 411 aa22.31■■□□□ 1.16
PRKN-202ENST00000366892 THUMPD2Q9BTF0 503 aaKnown RBP22.31■■□□□ 1.16
PRKN-202ENST00000366892 ZNF330Q9Y3S2 320 aaPredicted RBP22.31■■□□□ 1.16
PRKN-202ENST00000366892 TBC1D2BQ9UPU7 963 aa22.3■■□□□ 1.16
PRKN-202ENST00000366892 KIF13BQ9NQT8 1826 aa22.29■■□□□ 1.16
PRKN-202ENST00000366892 KCNA3P22001 575 aa22.28■■□□□ 1.16
PRKN-202ENST00000366892 RIPK4P57078 832 aa22.28■■□□□ 1.16
PRKN-202ENST00000366892 PNISRQ8TF01 805 aaKnown RBP22.28■■□□□ 1.16
PRKN-202ENST00000366892 PIP4K2AP48426 406 aaPredicted RBP22.27■■□□□ 1.16
PRKN-202ENST00000366892 NPM2Q86SE8 214 aaKnown RBP22.27■■□□□ 1.16
PRKN-202ENST00000366892 DLG5Q8TDM6 1919 aa22.26■■□□□ 1.15
PRKN-202ENST00000366892 SERPINB2P05120 415 aa22.26■■□□□ 1.15
PRKN-202ENST00000366892 TMPOP42166 694 aaKnown RBP22.26■■□□□ 1.15
PRKN-202ENST00000366892 BICDL1Q6ZP65 573 aa22.26■■□□□ 1.15
PRKN-202ENST00000366892 BCS1LQ9Y276 419 aa22.26■■□□□ 1.15
PRKN-202ENST00000366892 WDR43Q15061 677 aaKnown RBP eCLIP22.25■■□□□ 1.153e-8■■■■■ 70.1
PRKN-202ENST00000366892 TBC1D9BQ66K14 1250 aa22.25■■□□□ 1.15
PRKN-202ENST00000366892 CCDC146Q8IYE0 955 aa22.25■■□□□ 1.15
PRKN-202ENST00000366892 ADAMTS8Q9UP79 889 aa22.25■■□□□ 1.15
PRKN-202ENST00000366892 KIAA1551Q9HCM1 1747 aa22.25■■□□□ 1.15
PRKN-202ENST00000366892 EIF4A1P60842 406 aaKnown RBP22.24■■□□□ 1.15
PRKN-202ENST00000366892 N4BP2Q86UW6 1770 aaPredicted RBP22.23■■□□□ 1.15
PRKN-202ENST00000366892 NBPF26B4DH59 902 aa22.23■■□□□ 1.15
PRKN-202ENST00000366892 GIGYF1O75420 1035 aaPredicted RBP22.23■■□□□ 1.15
PRKN-202ENST00000366892 CAMTA2O94983 1202 aa22.23■■□□□ 1.15
PRKN-202ENST00000366892 NBPF10Q6P3W6 841 aaKnown RBP22.23■■□□□ 1.15
PRKN-202ENST00000366892 DZIP3Q86Y13 1208 aaKnown RBP22.23■■□□□ 1.15
PRKN-202ENST00000366892 NBPF15Q8N660 670 aa22.23■■□□□ 1.15
PRKN-202ENST00000366892 PIM2Q9P1W9 311 aa22.23■■□□□ 1.15
PRKN-202ENST00000366892 CHRNA5P30532 468 aa22.22■■□□□ 1.15
PRKN-202ENST00000366892 RRP7AQ9Y3A4 280 aaKnown RBP22.22■■□□□ 1.15
PRKN-202ENST00000366892 RUNDC1Q96C34 613 aa22.21■■□□□ 1.15
PRKN-202ENST00000366892 NEUROD2Q15784 382 aa22.21■■□□□ 1.15
PRKN-202ENST00000366892 LMOD3Q0VAK6 560 aa22.2■■□□□ 1.14
PRKN-202ENST00000366892 DALRD3Q5D0E6 543 aaKnown RBP22.19■■□□□ 1.14
PRKN-202ENST00000366892 TSPYL4Q9UJ04 414 aa22.19■■□□□ 1.14
PRKN-202ENST00000366892 SETDB2Q96T68 719 aa22.18■■□□□ 1.14
PRKN-202ENST00000366892 CCER2I3L3R5 266 aa22.17■■□□□ 1.14
PRKN-202ENST00000366892 CLEC4GQ6UXB4 293 aa22.17■■□□□ 1.14
PRKN-202ENST00000366892 ARHGAP27Q6ZUM4 889 aa22.17■■□□□ 1.14
PRKN-202ENST00000366892 AFDNP55196 1824 aaKnown RBP22.17■■□□□ 1.14
PRKN-202ENST00000366892 KDM3BQ7LBC6 1761 aa22.17■■□□□ 1.14
PRKN-202ENST00000366892 NRXN2Q9P2S2 1712 aa22.17■■□□□ 1.14
PRKN-202ENST00000366892 BABAM1Q9NWV8 329 aa22.16■■□□□ 1.14
PRKN-202ENST00000366892 TRIM35Q9UPQ4 493 aa22.16■■□□□ 1.14
PRKN-202ENST00000366892 CARMIL3Q8ND23 1372 aa22.16■■□□□ 1.14
PRKN-202ENST00000366892 PRR5LQ6MZQ0 368 aa22.16■■□□□ 1.14
PRKN-202ENST00000366892 CCDC24Q8N4L8 307 aa22.15■■□□□ 1.14
PRKN-202ENST00000366892 SCN7AQ01118 1682 aa22.15■■□□□ 1.14
PRKN-202ENST00000366892 ZNF652Q9Y2D9 606 aa22.14■■□□□ 1.13
PRKN-202ENST00000366892 BRCA1P38398 1863 aaKnown RBP22.14■■□□□ 1.13
PRKN-202ENST00000366892 H0YIN7 160 aa22.13■■□□□ 1.13
PRKN-202ENST00000366892 C2CD5Q86YS7 1000 aa22.13■■□□□ 1.13
PRKN-202ENST00000366892 NGEFQ8N5V2 710 aa22.13■■□□□ 1.13
PRKN-202ENST00000366892 BRIP1Q9BX63 1249 aa22.13■■□□□ 1.13
PRKN-202ENST00000366892 ATP10DQ9P241 1426 aa22.13■■□□□ 1.13
PRKN-202ENST00000366892 ADCY9O60503 1353 aa22.13■■□□□ 1.13
PRKN-202ENST00000366892 RGL2O15211 777 aa22.12■■□□□ 1.13
PRKN-202ENST00000366892 ANP32CO43423 234 aa22.12■■□□□ 1.13
PRKN-202ENST00000366892 CHL1O00533 1208 aa22.11■■□□□ 1.13
PRKN-202ENST00000366892 HLFQ16534 295 aa22.11■■□□□ 1.13
PRKN-202ENST00000366892 CNBD1Q8NA66 436 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms