RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 SPC24Q8NBT2 197 aa14.05□□□□□ -0.16
CDC42BPA-203ENST00000366766 SIL1Q9H173 461 aa14.05□□□□□ -0.16
CDC42BPA-203ENST00000366766 ECHDC1Q9NTX5 307 aa14.05□□□□□ -0.16
CDC42BPA-203ENST00000366766 ADGRF5Q8IZF2 1346 aa14.05□□□□□ -0.16
CDC42BPA-203ENST00000366766 MSH5O43196 834 aa14.04□□□□□ -0.16
CDC42BPA-203ENST00000366766 ABCC2Q92887 1545 aa14.04□□□□□ -0.16
CDC42BPA-203ENST00000366766 EPB41L2O43491 1005 aaKnown RBP14.04□□□□□ -0.16
CDC42BPA-203ENST00000366766 HS1BP3Q53T59 392 aa14.04□□□□□ -0.16
CDC42BPA-203ENST00000366766 TTC22Q5TAA0 569 aa14.04□□□□□ -0.16
CDC42BPA-203ENST00000366766 UHRF1BP1LA0JNW5 1464 aa14.04□□□□□ -0.16
CDC42BPA-203ENST00000366766 KANK3Q6NY19 840 aa14.04□□□□□ -0.16
CDC42BPA-203ENST00000366766 POTEB2H3BUK9 544 aa14.03□□□□□ -0.16
CDC42BPA-203ENST00000366766 ARHGAP29Q52LW3 1261 aa14.03□□□□□ -0.16
CDC42BPA-203ENST00000366766 CCDC181Q5TID7 509 aa14.03□□□□□ -0.16
CDC42BPA-203ENST00000366766 IKQ13123 557 aaPredicted RBP14.03□□□□□ -0.16
CDC42BPA-203ENST00000366766 ANKRD18AQ8IVF6 992 aa14.03□□□□□ -0.16
CDC42BPA-203ENST00000366766 KIF20AO95235 890 aa14.03□□□□□ -0.16
CDC42BPA-203ENST00000366766 TBC1D9Q6ZT07 1266 aa14.03□□□□□ -0.16
CDC42BPA-203ENST00000366766 DDX11Q96FC9 970 aa14.03□□□□□ -0.16
CDC42BPA-203ENST00000366766 KIAA0754O94854 1291 aa14.03□□□□□ -0.16
CDC42BPA-203ENST00000366766 UBXN4Q92575 508 aa14.03□□□□□ -0.16
CDC42BPA-203ENST00000366766 FYB1O15117 783 aa14.03□□□□□ -0.16
CDC42BPA-203ENST00000366766 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.03□□□□□ -0.16
CDC42BPA-203ENST00000366766 MAP3K12Q12852 859 aa14.02□□□□□ -0.16
CDC42BPA-203ENST00000366766 C8orf76Q96K31 380 aa14.02□□□□□ -0.16
CDC42BPA-203ENST00000366766 TUBB4BP68371 445 aa14.02□□□□□ -0.16
CDC42BPA-203ENST00000366766 STX1AQ16623 288 aa14.02□□□□□ -0.16
CDC42BPA-203ENST00000366766 MYL6BP14649 208 aa14.02□□□□□ -0.16
CDC42BPA-203ENST00000366766 AXDND1Q5T1B0 1012 aaPredicted RBP14.02□□□□□ -0.16
CDC42BPA-203ENST00000366766 TNPO1Q92973 898 aaKnown RBP14.02□□□□□ -0.16
CDC42BPA-203ENST00000366766 RBM42Q9BTD8 480 aaKnown RBP14.02□□□□□ -0.16
CDC42BPA-203ENST00000366766 ABCC1P33527 1531 aa14.02□□□□□ -0.17
CDC42BPA-203ENST00000366766 BMP15O95972 392 aa14.02□□□□□ -0.17
CDC42BPA-203ENST00000366766 IFIT1P09914 478 aaKnown RBP14.02□□□□□ -0.17
CDC42BPA-203ENST00000366766 CEBPZQ03701 1054 aaKnown RBP14.02□□□□□ -0.17
CDC42BPA-203ENST00000366766 CCDC148Q8NFR7 591 aa14.02□□□□□ -0.17
CDC42BPA-203ENST00000366766 SHROOM2Q13796 1616 aa14.02□□□□□ -0.17
CDC42BPA-203ENST00000366766 PTPRKQ15262 1439 aa14.02□□□□□ -0.17
CDC42BPA-203ENST00000366766 IDI1Q13907 227 aa14.02□□□□□ -0.17
CDC42BPA-203ENST00000366766 TSPYL1Q9H0U9 437 aa14.02□□□□□ -0.17
CDC42BPA-203ENST00000366766 PTPN14Q15678 1187 aa14.02□□□□□ -0.17
CDC42BPA-203ENST00000366766 VPS36Q86VN1 386 aa14.02□□□□□ -0.17
CDC42BPA-203ENST00000366766 SLF2Q8IX21 1173 aa14.02□□□□□ -0.17
CDC42BPA-203ENST00000366766 TRPM2O94759 1503 aa14.02□□□□□ -0.17
CDC42BPA-203ENST00000366766 IFIT5Q13325 482 aaKnown RBP14.01□□□□□ -0.17
CDC42BPA-203ENST00000366766 PRIMPOLQ96LW4 560 aa14.01□□□□□ -0.17
CDC42BPA-203ENST00000366766 LRP2BPQ9P2M1 347 aa14.01□□□□□ -0.17
CDC42BPA-203ENST00000366766 PRM3Q9NNZ6 103 aa14.01□□□□□ -0.17
CDC42BPA-203ENST00000366766 C20orf194Q5TEA3 1177 aa14.01□□□□□ -0.17
CDC42BPA-203ENST00000366766 STK3Q13188 491 aa14.01□□□□□ -0.17
CDC42BPA-203ENST00000366766 MCM10Q7L590 875 aa14.01□□□□□ -0.17
CDC42BPA-203ENST00000366766 DESP17661 470 aa14□□□□□ -0.17
CDC42BPA-203ENST00000366766 GTPBP4Q9BZE4 634 aaKnown RBP14□□□□□ -0.17
CDC42BPA-203ENST00000366766 SEC63Q9UGP8 760 aaKnown RBP14□□□□□ -0.17
CDC42BPA-203ENST00000366766 LRRFIP2Q9Y608 721 aaKnown RBP14□□□□□ -0.17
CDC42BPA-203ENST00000366766 PDE4CQ08493 712 aa14□□□□□ -0.17
CDC42BPA-203ENST00000366766 CFAP100Q494V2 611 aa14□□□□□ -0.17
CDC42BPA-203ENST00000366766 WWC2Q6AWC2 1192 aa14□□□□□ -0.17
CDC42BPA-203ENST00000366766 STX6O43752 255 aa14□□□□□ -0.17
CDC42BPA-203ENST00000366766 ZFYP08048 801 aaPredicted RBP14□□□□□ -0.17
CDC42BPA-203ENST00000366766 CCDC12Q8WUD4 166 aaPredicted RBP14□□□□□ -0.17
CDC42BPA-203ENST00000366766 NAPBQ9H115 298 aa14□□□□□ -0.17
CDC42BPA-203ENST00000366766 ATP7AQ04656 1500 aa14□□□□□ -0.17
CDC42BPA-203ENST00000366766 FILIP1Q7Z7B0 1213 aa14□□□□□ -0.17
CDC42BPA-203ENST00000366766 IQCA1Q86XH1 822 aa14□□□□□ -0.17
CDC42BPA-203ENST00000366766 ATP2B1P20020 1258 aa14□□□□□ -0.17
CDC42BPA-203ENST00000366766 IL1RAPL2Q9NP60 686 aa14□□□□□ -0.17
CDC42BPA-203ENST00000366766 FAM107BQ9H098 131 aa14□□□□□ -0.17
CDC42BPA-203ENST00000366766 KIF5CO60282 957 aa13.99□□□□□ -0.17
CDC42BPA-203ENST00000366766 CAVIN4Q5BKX8 364 aa13.99□□□□□ -0.17
CDC42BPA-203ENST00000366766 METTL24Q5JXM2 366 aa13.99□□□□□ -0.17
CDC42BPA-203ENST00000366766 PPIP5K1Q6PFW1 1433 aa13.99□□□□□ -0.17
CDC42BPA-203ENST00000366766 EHBP1Q8NDI1 1231 aa13.99□□□□□ -0.17
CDC42BPA-203ENST00000366766 CGNQ9P2M7 1197 aaKnown RBP13.99□□□□□ -0.17
CDC42BPA-203ENST00000366766 PRPF40BQ6NWY9 871 aaKnown RBP13.99□□□□□ -0.17
CDC42BPA-203ENST00000366766 DYNC1I1O14576 645 aa13.98□□□□□ -0.17
CDC42BPA-203ENST00000366766 CTCFLQ8NI51 663 aaPredicted RBP13.98□□□□□ -0.17
CDC42BPA-203ENST00000366766 SLC26A8Q96RN1 970 aa13.98□□□□□ -0.17
CDC42BPA-203ENST00000366766 TTC41PQ6P2S7 1318 aa13.98□□□□□ -0.17
CDC42BPA-203ENST00000366766 PAXBP1Q9Y5B6 917 aa13.98□□□□□ -0.17
CDC42BPA-203ENST00000366766 BRPF1P55201 1214 aaPredicted RBP13.98□□□□□ -0.17
CDC42BPA-203ENST00000366766 SLC5A1P13866 664 aa13.98□□□□□ -0.17
CDC42BPA-203ENST00000366766 ASXL2Q76L83 1435 aa13.98□□□□□ -0.17
CDC42BPA-203ENST00000366766 PPP4R3BQ5MIZ7 849 aa13.98□□□□□ -0.17
CDC42BPA-203ENST00000366766 TMOD3Q9NYL9 352 aa13.98□□□□□ -0.17
CDC42BPA-203ENST00000366766 KIF5BP33176 963 aa13.98□□□□□ -0.17
CDC42BPA-203ENST00000366766 PHF8Q9UPP1 1060 aa13.98□□□□□ -0.17
CDC42BPA-203ENST00000366766 BABAM1Q9NWV8 329 aa13.98□□□□□ -0.17
CDC42BPA-203ENST00000366766 NUP133Q8WUM0 1156 aa13.98□□□□□ -0.17
CDC42BPA-203ENST00000366766 DNAI2Q9GZS0 605 aa13.98□□□□□ -0.17
CDC42BPA-203ENST00000366766 STRN4Q9NRL3 753 aa13.98□□□□□ -0.17
CDC42BPA-203ENST00000366766 TNRQ92752 1358 aa13.97□□□□□ -0.17
CDC42BPA-203ENST00000366766 TMCO3Q6UWJ1 677 aa13.97□□□□□ -0.17
CDC42BPA-203ENST00000366766 CCDC150Q8NCX0 1101 aa13.97□□□□□ -0.17
CDC42BPA-203ENST00000366766 PZPP20742 1482 aa13.97□□□□□ -0.17
CDC42BPA-203ENST00000366766 A0A087WZG4 1122 aa13.97□□□□□ -0.17
CDC42BPA-203ENST00000366766 FKBP15Q5T1M5 1219 aa13.97□□□□□ -0.17
CDC42BPA-203ENST00000366766 MBIPQ9NS73 344 aa13.97□□□□□ -0.17
CDC42BPA-203ENST00000366766 ALDH1L1O75891 902 aa13.97□□□□□ -0.17
CDC42BPA-203ENST00000366766 INTS4Q96HW7 963 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms