RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 CYP19A1P11511 503 aaPredicted RBP12.25□□□□□ -0.45
MRPL55-216ENST00000366744 DCTN1Q14203 1278 aa12.25□□□□□ -0.45
MRPL55-216ENST00000366744 AMIGO3Q86WK7 504 aa12.25□□□□□ -0.45
MRPL55-216ENST00000366744 PELP1Q8IZL8 1130 aaKnown RBP12.25□□□□□ -0.45
MRPL55-216ENST00000366744 ZNF496Q96IT1 587 aaPredicted RBP12.25□□□□□ -0.45
MRPL55-216ENST00000366744 USP42Q9H9J4 1324 aaKnown RBP12.25□□□□□ -0.45
MRPL55-216ENST00000366744 N4BP2Q86UW6 1770 aaPredicted RBP12.25□□□□□ -0.45
MRPL55-216ENST00000366744 A0A087WZG4 1122 aa12.24□□□□□ -0.45
MRPL55-216ENST00000366744 MMP10P09238 476 aa12.24□□□□□ -0.45
MRPL55-216ENST00000366744 CANXP27824 592 aaKnown RBP12.24□□□□□ -0.45
MRPL55-216ENST00000366744 SOS1Q07889 1333 aaPredicted RBP12.24□□□□□ -0.45
MRPL55-216ENST00000366744 TAF7Q15545 349 aaPredicted RBP12.24□□□□□ -0.45
MRPL55-216ENST00000366744 CCDC146Q8IYE0 955 aa12.24□□□□□ -0.45
MRPL55-216ENST00000366744 ARHGEF1Q92888 912 aaKnown RBP12.24□□□□□ -0.45
MRPL55-216ENST00000366744 RUNDC1Q96C34 613 aa12.24□□□□□ -0.45
MRPL55-216ENST00000366744 SNRPA1P09661 255 aaKnown RBP12.23□□□□□ -0.45
MRPL55-216ENST00000366744 RIPK4P57078 832 aa12.23□□□□□ -0.45
MRPL55-216ENST00000366744 INTS5Q6P9B9 1019 aaKnown RBP12.23□□□□□ -0.45
MRPL55-216ENST00000366744 SMIM5Q71RC9 77 aa12.23□□□□□ -0.45
MRPL55-216ENST00000366744 ZBTB1Q9Y2K1 713 aa12.23□□□□□ -0.45
MRPL55-216ENST00000366744 CD2APQ9Y5K6 639 aa12.23□□□□□ -0.45
MRPL55-216ENST00000366744 PARP3Q9Y6F1 533 aa12.23□□□□□ -0.45
MRPL55-216ENST00000366744 BRCA1P38398 1863 aaKnown RBP12.23□□□□□ -0.45
MRPL55-216ENST00000366744 GYS1P13807 737 aa12.22□□□□□ -0.45
MRPL55-216ENST00000366744 GPR162Q16538 588 aa12.22□□□□□ -0.45
MRPL55-216ENST00000366744 DLEC1Q9Y238 1755 aa12.22□□□□□ -0.45
MRPL55-216ENST00000366744 C10orf71Q711Q0 1435 aa12.21□□□□□ -0.45
MRPL55-216ENST00000366744 GOLGB1Q14789 3259 aaKnown RBP12.21□□□□□ -0.45
MRPL55-216ENST00000366744 ARFGEF1Q9Y6D6 1849 aa12.21□□□□□ -0.45
MRPL55-216ENST00000366744 KIAA1551Q9HCM1 1747 aa12.21□□□□□ -0.45
MRPL55-216ENST00000366744 NRXN2Q9P2S2 1712 aa12.21□□□□□ -0.45
MRPL55-216ENST00000366744 TMPOP42166 694 aaKnown RBP12.21□□□□□ -0.45
MRPL55-216ENST00000366744 NEUROD2Q15784 382 aa12.21□□□□□ -0.45
MRPL55-216ENST00000366744 TSPYL4Q9UJ04 414 aa12.21□□□□□ -0.45
MRPL55-216ENST00000366744 IL6STP40189 918 aaPredicted RBP12.2□□□□□ -0.46
MRPL55-216ENST00000366744 MRS2Q9HD23 443 aa12.2□□□□□ -0.46
MRPL55-216ENST00000366744 SRP68Q9UHB9 627 aaKnown RBP12.2□□□□□ -0.46
MRPL55-216ENST00000366744 NARFQ9UHQ1 456 aa12.2□□□□□ -0.46
MRPL55-216ENST00000366744 ADAMTS8Q9UP79 889 aa12.2□□□□□ -0.46
MRPL55-216ENST00000366744 RRP7AQ9Y3A4 280 aaKnown RBP12.2□□□□□ -0.46
MRPL55-216ENST00000366744 CACNA1SQ13698 1873 aa12.2□□□□□ -0.46
MRPL55-216ENST00000366744 NUP98P52948 1817 aa12.2□□□□□ -0.46
MRPL55-216ENST00000366744 NPHP1O15259 732 aa12.19□□□□□ -0.46
MRPL55-216ENST00000366744 CALD1Q05682 793 aaKnown RBP12.19□□□□□ -0.46
MRPL55-216ENST00000366744 USPL1Q5W0Q7 1092 aa12.19□□□□□ -0.46
MRPL55-216ENST00000366744 NLGN2Q8NFZ4 835 aa12.19□□□□□ -0.46
MRPL55-216ENST00000366744 THUMPD2Q9BTF0 503 aaKnown RBP12.19□□□□□ -0.46
MRPL55-216ENST00000366744 ZNF652Q9Y2D9 606 aa12.19□□□□□ -0.46
MRPL55-216ENST00000366744 ANKRD36CQ5JPF3 1778 aa12.19□□□□□ -0.46
MRPL55-216ENST00000366744 KCNQ3O43525 872 aa12.18□□□□□ -0.46
MRPL55-216ENST00000366744 BABAM1Q9NWV8 329 aa12.18□□□□□ -0.46
MRPL55-216ENST00000366744 MIS18AQ9NYP9 233 aa12.18□□□□□ -0.46
MRPL55-216ENST00000366744 UTRNP46939 3433 aa12.17□□□□□ -0.46
MRPL55-216ENST00000366744 PXDNLA1KZ92 1463 aa12.17□□□□□ -0.46
MRPL55-216ENST00000366744 GRIN3BO60391 1043 aa12.17□□□□□ -0.46
MRPL55-216ENST00000366744 EIF5P55010 431 aaKnown RBP12.17□□□□□ -0.46
MRPL55-216ENST00000366744 FKBP8Q14318 412 aa12.17□□□□□ -0.46
MRPL55-216ENST00000366744 LAS1LQ9Y4W2 734 aaKnown RBP12.17□□□□□ -0.46
MRPL55-216ENST00000366744 CARMIL3Q8ND23 1372 aa12.17□□□□□ -0.46
MRPL55-216ENST00000366744 A1BGP04217 495 aa12.16□□□□□ -0.46
MRPL55-216ENST00000366744 YY1P25490 414 aa12.16□□□□□ -0.46
MRPL55-216ENST00000366744 DZIP3Q86Y13 1208 aaKnown RBP12.16□□□□□ -0.46
MRPL55-216ENST00000366744 ANKRD31Q8N7Z5 1873 aa12.16□□□□□ -0.46
MRPL55-216ENST00000366744 ERBB4Q15303 1308 aa12.15□□□□□ -0.46
MRPL55-216ENST00000366744 EIF4A1P60842 406 aaKnown RBP12.15□□□□□ -0.46
MRPL55-216ENST00000366744 KIF6Q6ZMV9 814 aa12.15□□□□□ -0.46
MRPL55-216ENST00000366744 TBC1D2BQ9UPU7 963 aa12.15□□□□□ -0.46
MRPL55-216ENST00000366744 USP16Q9Y5T5 823 aa12.15□□□□□ -0.46
MRPL55-216ENST00000366744 ARFGEF2Q9Y6D5 1785 aa12.15□□□□□ -0.46
MRPL55-216ENST00000366744 COL11A2P13942 1736 aaPredicted RBP12.14□□□□□ -0.47
MRPL55-216ENST00000366744 PRAMEF22A3QJZ6 481 aa12.14□□□□□ -0.47
MRPL55-216ENST00000366744 POLRMTO00411 1230 aaKnown RBP12.14□□□□□ -0.47
MRPL55-216ENST00000366744 GIGYF1O75420 1035 aaPredicted RBP12.14□□□□□ -0.47
MRPL55-216ENST00000366744 TGFB2P61812 414 aa12.14□□□□□ -0.47
MRPL55-216ENST00000366744 DDR1Q08345 913 aa12.14□□□□□ -0.47
MRPL55-216ENST00000366744 BICDL1Q6ZP65 573 aa12.14□□□□□ -0.47
MRPL55-216ENST00000366744 CACNA1FO60840 1977 aa12.13□□□□□ -0.47
MRPL55-216ENST00000366744 APAF1O14727 1248 aa12.13□□□□□ -0.47
MRPL55-216ENST00000366744 PIP4K2AP48426 406 aaPredicted RBP12.13□□□□□ -0.47
MRPL55-216ENST00000366744 NFIXQ14938 502 aa12.13□□□□□ -0.47
MRPL55-216ENST00000366744 SETDB2Q96T68 719 aa12.13□□□□□ -0.47
MRPL55-216ENST00000366744 MYL6BP14649 208 aa12.12□□□□□ -0.47
MRPL55-216ENST00000366744 GNAI1P63096 354 aa12.12□□□□□ -0.47
MRPL55-216ENST00000366744 ST5P78524 1137 aa12.12□□□□□ -0.47
MRPL55-216ENST00000366744 CNBD1Q8NA66 436 aa12.12□□□□□ -0.47
MRPL55-216ENST00000366744 WWC3Q9ULE0 1092 aa12.12□□□□□ -0.47
MRPL55-216ENST00000366744 TRIM35Q9UPQ4 493 aa12.12□□□□□ -0.47
MRPL55-216ENST00000366744 RGL2O15211 777 aa12.11□□□□□ -0.47
MRPL55-216ENST00000366744 CAMTA2O94983 1202 aa12.11□□□□□ -0.47
MRPL55-216ENST00000366744 SERPINB2P05120 415 aa12.11□□□□□ -0.47
MRPL55-216ENST00000366744 CLEC4GQ6UXB4 293 aa12.11□□□□□ -0.47
MRPL55-216ENST00000366744 CFAP44Q96MT7 982 aa12.11□□□□□ -0.47
MRPL55-216ENST00000366744 YBX3P16989 372 aaKnown RBP eCLIP12.1□□□□□ -0.472e-6■□□□□ 10.7
MRPL55-216ENST00000366744 EIF2S2P20042 333 aaKnown RBP12.1□□□□□ -0.47
MRPL55-216ENST00000366744 TM4SF1P30408 202 aa12.1□□□□□ -0.47
MRPL55-216ENST00000366744 TBC1D9BQ66K14 1250 aa12.1□□□□□ -0.47
MRPL55-216ENST00000366744 NGEFQ8N5V2 710 aa12.1□□□□□ -0.47
MRPL55-216ENST00000366744 CHMP4AQ9BY43 222 aa12.1□□□□□ -0.47
MRPL55-216ENST00000366744 BCL2L12Q9HB09 334 aa12.1□□□□□ -0.47
MRPL55-216ENST00000366744 IFT57Q9NWB7 429 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms