RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 DNAAF2Q9NVR5 837 aaKnown RBP5.59□□□□□ -1.51
RNU4-42P-201ENST00000364738 CABP1Q9NZU7 370 aa5.59□□□□□ -1.51
RNU4-42P-201ENST00000364738 GGA1Q9UJY5 639 aa5.59□□□□□ -1.51
RNU4-42P-201ENST00000364738 MKL2Q9ULH7 1088 aa5.59□□□□□ -1.51
RNU4-42P-201ENST00000364738 IQSEC3Q9UPP2 1182 aaPredicted RBP5.59□□□□□ -1.51
RNU4-42P-201ENST00000364738 NOD1Q9Y239 953 aa5.59□□□□□ -1.51
RNU4-42P-201ENST00000364738 PCDHGA11Q9Y5H2 935 aa5.59□□□□□ -1.51
RNU4-42P-201ENST00000364738 USP3Q9Y6I4 520 aa5.59□□□□□ -1.51
RNU4-42P-201ENST00000364738 LOC100996750A0A140TA64 210 aa5.58□□□□□ -1.52
RNU4-42P-201ENST00000364738 A0A1W2PNR3 127 aa5.58□□□□□ -1.52
RNU4-42P-201ENST00000364738 DCDC2BA2VCK2 349 aa5.58□□□□□ -1.52
RNU4-42P-201ENST00000364738 CDK2AP1O14519 115 aa5.58□□□□□ -1.52
RNU4-42P-201ENST00000364738 C2CD2LO14523 706 aa5.58□□□□□ -1.52
RNU4-42P-201ENST00000364738 MSTNO14793 375 aa5.58□□□□□ -1.52
RNU4-42P-201ENST00000364738 ATXN7O15265 892 aaPredicted RBP5.58□□□□□ -1.52
RNU4-42P-201ENST00000364738 RAD21O60216 631 aa5.58□□□□□ -1.52
RNU4-42P-201ENST00000364738 GTF2IP78347 998 aa5.58□□□□□ -1.52
RNU4-42P-201ENST00000364738 NCOA4Q13772 614 aa5.58□□□□□ -1.52
RNU4-42P-201ENST00000364738 MTFR1Q15390 333 aa5.58□□□□□ -1.52
RNU4-42P-201ENST00000364738 ZNF295-AS1Q8N0V1 137 aa5.58□□□□□ -1.52
RNU4-42P-201ENST00000364738 NFATC2IPQ8NCF5 419 aa5.58□□□□□ -1.52
RNU4-42P-201ENST00000364738 KRTAP4-6Q9BYQ5 205 aa5.58□□□□□ -1.52
RNU4-42P-201ENST00000364738 ALG2Q9H553 416 aa5.58□□□□□ -1.52
RNU4-42P-201ENST00000364738 ZDHHC3Q9NYG2 299 aa5.58□□□□□ -1.52
RNU4-42P-201ENST00000364738 USP17L5A8MUK1 530 aa5.57□□□□□ -1.52
RNU4-42P-201ENST00000364738 BACH1O14867 736 aa5.57□□□□□ -1.52
RNU4-42P-201ENST00000364738 ARAFP10398 606 aa5.57□□□□□ -1.52
RNU4-42P-201ENST00000364738 GJA3Q9Y6H8 435 aa5.57□□□□□ -1.52
RNU4-42P-201ENST00000364738 NEURL1BA8MQ27 555 aa5.56□□□□□ -1.52
RNU4-42P-201ENST00000364738 KHNYNO15037 678 aaKnown RBP5.56□□□□□ -1.52
RNU4-42P-201ENST00000364738 LZTS3O60299 673 aaPredicted RBP5.56□□□□□ -1.52
RNU4-42P-201ENST00000364738 UBTFP17480 764 aaKnown RBP5.56□□□□□ -1.52
RNU4-42P-201ENST00000364738 CD33P20138 364 aa5.56□□□□□ -1.52
RNU4-42P-201ENST00000364738 DEPDC4Q8N2C3 294 aa5.56□□□□□ -1.52
RNU4-42P-201ENST00000364738 SPOCK3Q9BQ16 436 aa5.56□□□□□ -1.52
RNU4-42P-201ENST00000364738 ZNF358Q9NW07 568 aa5.56□□□□□ -1.52
RNU4-42P-201ENST00000364738 PARP3Q9Y6F1 533 aa5.56□□□□□ -1.52
RNU4-42P-201ENST00000364738 ITGB2P05107 769 aa5.55□□□□□ -1.52
RNU4-42P-201ENST00000364738 FAM157BP0CG42 384 aa5.55□□□□□ -1.52
RNU4-42P-201ENST00000364738 MAPTP10636 758 aaKnown RBP5.55□□□□□ -1.52
RNU4-42P-201ENST00000364738 EPXP11678 715 aa5.55□□□□□ -1.52
RNU4-42P-201ENST00000364738 TNP2Q05952 138 aa5.55□□□□□ -1.52
RNU4-42P-201ENST00000364738 FLIIQ13045 1269 aa5.55□□□□□ -1.52
RNU4-42P-201ENST00000364738 BICDL1Q6ZP65 573 aa5.55□□□□□ -1.52
RNU4-42P-201ENST00000364738 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.55□□□□□ -1.52
RNU4-42P-201ENST00000364738 ZIC5Q96T25 663 aa5.55□□□□□ -1.52
RNU4-42P-201ENST00000364738 SCHIP1Q9P0W5 487 aaPredicted RBP5.55□□□□□ -1.52
RNU4-42P-201ENST00000364738 POM121CA8CG34 1229 aa5.54□□□□□ -1.52
RNU4-42P-201ENST00000364738 ADH6P28332 368 aa5.54□□□□□ -1.52
RNU4-42P-201ENST00000364738 TXLNAP40222 546 aa5.54□□□□□ -1.52
RNU4-42P-201ENST00000364738 GRIN2CQ14957 1233 aa5.54□□□□□ -1.52
RNU4-42P-201ENST00000364738 FAM182BQ5T319 152 aa5.54□□□□□ -1.52
RNU4-42P-201ENST00000364738 ALYREFQ86V81 257 aaKnown RBP5.54□□□□□ -1.52
RNU4-42P-201ENST00000364738 TRIM50Q86XT4 487 aa5.54□□□□□ -1.52
RNU4-42P-201ENST00000364738 SLC9A9Q8IVB4 645 aa5.54□□□□□ -1.52
RNU4-42P-201ENST00000364738 TPCN2Q8NHX9 752 aa5.54□□□□□ -1.52
RNU4-42P-201ENST00000364738 ZDHHC1Q8WTX9 485 aa5.54□□□□□ -1.52
RNU4-42P-201ENST00000364738 HCN2Q9UL51 889 aa5.54□□□□□ -1.52
RNU4-42P-201ENST00000364738 KRBA1A5PL33 1030 aa5.53□□□□□ -1.52
RNU4-42P-201ENST00000364738 USP17L3A6NCW0 530 aa5.53□□□□□ -1.52
RNU4-42P-201ENST00000364738 USP17L4A6NCW7 530 aa5.53□□□□□ -1.52
RNU4-42P-201ENST00000364738 PIK3R2O00459 728 aa5.53□□□□□ -1.52
RNU4-42P-201ENST00000364738 GNB5O14775 395 aa5.53□□□□□ -1.52
RNU4-42P-201ENST00000364738 PROCP04070 461 aa5.53□□□□□ -1.52
RNU4-42P-201ENST00000364738 HOXB4P17483 251 aaPredicted RBP5.53□□□□□ -1.52
RNU4-42P-201ENST00000364738 COL8A1P27658 744 aa5.53□□□□□ -1.52
RNU4-42P-201ENST00000364738 EPHA4P54764 986 aa5.53□□□□□ -1.52
RNU4-42P-201ENST00000364738 SAMD5Q5TGI4 173 aa5.53□□□□□ -1.52
RNU4-42P-201ENST00000364738 USP17L2Q6R6M4 530 aa5.53□□□□□ -1.52
RNU4-42P-201ENST00000364738 USP17L1Q7RTZ2 530 aa5.53□□□□□ -1.52
RNU4-42P-201ENST00000364738 FCHSD1Q86WN1 690 aa5.53□□□□□ -1.52
RNU4-42P-201ENST00000364738 ADAMTS19Q8TE59 1207 aa5.53□□□□□ -1.52
RNU4-42P-201ENST00000364738 L3MBTL2Q969R5 705 aa5.53□□□□□ -1.52
RNU4-42P-201ENST00000364738 BTBD6Q96KE9 485 aa5.53□□□□□ -1.52
RNU4-42P-201ENST00000364738 AVENQ9NQS1 362 aaPredicted RBP5.53□□□□□ -1.52
RNU4-42P-201ENST00000364738 ZNF232Q9UNY5 417 aa5.53□□□□□ -1.52
RNU4-42P-201ENST00000364738 DGKGP49619 791 aa5.52□□□□□ -1.53
RNU4-42P-201ENST00000364738 TEAD4Q15561 434 aa5.52□□□□□ -1.53
RNU4-42P-201ENST00000364738 TBCELQ5QJ74 424 aa5.52□□□□□ -1.53
RNU4-42P-201ENST00000364738 LINC00114Q6XXX2 140 aa5.52□□□□□ -1.53
RNU4-42P-201ENST00000364738 CHSY3Q70JA7 882 aa5.52□□□□□ -1.53
RNU4-42P-201ENST00000364738 TNS4Q8IZW8 715 aa5.52□□□□□ -1.53
RNU4-42P-201ENST00000364738 UCN2Q96RP3 112 aa5.52□□□□□ -1.53
RNU4-42P-201ENST00000364738 SUV39H2Q9H5I1 410 aa5.52□□□□□ -1.53
RNU4-42P-201ENST00000364738 PRR12Q9ULL5 1215 aa5.52□□□□□ -1.53
RNU4-42P-201ENST00000364738 KIAA1024Q9UPX6 916 aa5.52□□□□□ -1.53
RNU4-42P-201ENST00000364738 EFSO43281 561 aa5.51□□□□□ -1.53
RNU4-42P-201ENST00000364738 NOS2P35228 1153 aa5.51□□□□□ -1.53
RNU4-42P-201ENST00000364738 ATP1A2P50993 1020 aa5.51□□□□□ -1.53
RNU4-42P-201ENST00000364738 PCBP4P57723 403 aaKnown RBP5.51□□□□□ -1.53
RNU4-42P-201ENST00000364738 ZNF468Q5VIY5 522 aaPredicted RBP5.51□□□□□ -1.53
RNU4-42P-201ENST00000364738 LRRC69Q6ZNQ3 347 aa5.51□□□□□ -1.53
RNU4-42P-201ENST00000364738 PLEKHM2Q8IWE5 1019 aa5.51□□□□□ -1.53
RNU4-42P-201ENST00000364738 STRN4Q9NRL3 753 aa5.51□□□□□ -1.53
RNU4-42P-201ENST00000364738 NOP53Q9NZM5 478 aaKnown RBP5.51□□□□□ -1.53
RNU4-42P-201ENST00000364738 MARK1Q9P0L2 795 aa5.51□□□□□ -1.53
RNU4-42P-201ENST00000364738 KLF15Q9UIH9 416 aa5.51□□□□□ -1.53
RNU4-42P-201ENST00000364738 SERTM1A2A2V5 107 aa5.5□□□□□ -1.53
RNU4-42P-201ENST00000364738 CLDN10P78369 228 aa5.5□□□□□ -1.53
RNU4-42P-201ENST00000364738 LAMC2Q13753 1193 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms