RNA–Protein interactions for RNA: ENST00000364033.1

RNU1-42P-201, Transcript of RNA, U1 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU1-42P, Length 160 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-42P-201ENST00000364033 HSPA1AP0DMV8 641 aaKnown RBP2.07□□□□□ -2.08
RNU1-42P-201ENST00000364033 HSPA1BP0DMV9 641 aaKnown RBP2.07□□□□□ -2.08
RNU1-42P-201ENST00000364033 VEGFAP15692 232 aaPredicted RBP2.07□□□□□ -2.08
RNU1-42P-201ENST00000364033 ERFEQ4G0M1 354 aa2.07□□□□□ -2.08
RNU1-42P-201ENST00000364033 RC3H1Q5TC82 1133 aaKnown RBP2.07□□□□□ -2.08
RNU1-42P-201ENST00000364033 DPY19L2Q6NUT2 758 aa2.07□□□□□ -2.08
RNU1-42P-201ENST00000364033 DLK2Q6UY11 383 aa2.07□□□□□ -2.08
RNU1-42P-201ENST00000364033 MCM10Q7L590 875 aa2.07□□□□□ -2.08
RNU1-42P-201ENST00000364033 NPM2Q86SE8 214 aaKnown RBP2.07□□□□□ -2.08
RNU1-42P-201ENST00000364033 TTC5Q8N0Z6 440 aa2.07□□□□□ -2.08
RNU1-42P-201ENST00000364033 TTLL6Q8N841 843 aa2.07□□□□□ -2.08
RNU1-42P-201ENST00000364033 NECTIN2Q92692 538 aa2.07□□□□□ -2.08
RNU1-42P-201ENST00000364033 KLRG1Q96E93 195 aa2.07□□□□□ -2.08
RNU1-42P-201ENST00000364033 ZNF496Q96IT1 587 aaPredicted RBP2.07□□□□□ -2.08
RNU1-42P-201ENST00000364033 THUMPD2Q9BTF0 503 aaKnown RBP2.07□□□□□ -2.08
RNU1-42P-201ENST00000364033 ZNF277Q9NRM2 450 aaPredicted RBP2.07□□□□□ -2.08
RNU1-42P-201ENST00000364033 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP2.07□□□□□ -2.08
RNU1-42P-201ENST00000364033 NARFQ9UHQ1 456 aa2.07□□□□□ -2.08
RNU1-42P-201ENST00000364033 TSKSQ9UJT2 592 aa2.07□□□□□ -2.08
RNU1-42P-201ENST00000364033 TIMELESSQ9UNS1 1208 aa2.07□□□□□ -2.08
RNU1-42P-201ENST00000364033 RRP7AQ9Y3A4 280 aaKnown RBP2.07□□□□□ -2.08
RNU1-42P-201ENST00000364033 GTF3C3Q9Y5Q9 886 aa2.07□□□□□ -2.08
RNU1-42P-201ENST00000364033 KDM2BQ8NHM5 1336 aa2.07□□□□□ -2.08
RNU1-42P-201ENST00000364033 USP42Q9H9J4 1324 aaKnown RBP2.07□□□□□ -2.08
RNU1-42P-201ENST00000364033 RGPD2P0DJD1 1756 aa2.07□□□□□ -2.08
RNU1-42P-201ENST00000364033 PDE4DIPQ5VU43 2346 aa2.07□□□□□ -2.08
RNU1-42P-201ENST00000364033 PXDNLA1KZ92 1463 aa2.07□□□□□ -2.08
RNU1-42P-201ENST00000364033 CUL9Q8IWT3 2517 aa2.07□□□□□ -2.08
RNU1-42P-201ENST00000364033 ABCC6O95255 1503 aa2.07□□□□□ -2.08
RNU1-42P-201ENST00000364033 KCPQ6ZWJ8 1503 aa2.07□□□□□ -2.08
RNU1-42P-201ENST00000364033 KIAA1210Q9ULL0 1709 aa2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 AKAP12Q02952 1782 aa2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 GLTPD2A6NH11 291 aa2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 GNAT3A8MTJ3 354 aa2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 NFKBIEO00221 500 aa2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 STARD3NLO95772 234 aa2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 ANXA1P04083 346 aa2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 U2AF1L5P0DN76 240 aaPredicted RBP2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 MYL6BP14649 208 aa2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 ADRA2BP18089 450 aa2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 EIF2S2P20042 333 aaKnown RBP2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 LMNB1P20700 586 aa2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 GPTP24298 496 aa2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 GTF2E1P29083 439 aaPredicted RBP2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 PRKAR2BP31323 418 aa2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 EIF5P55010 431 aaKnown RBP2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 U2AF1Q01081 240 aaKnown RBP eCLIP2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 TEFQ10587 303 aa2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 AIMP1Q12904 312 aaKnown RBP2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 NEUROD2Q15784 382 aa2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 HLFQ16534 295 aa2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 AMER1Q5JTC6 1135 aaPredicted RBP2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 MAP1SQ66K74 1059 aaPredicted RBP2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 PRR5LQ6MZQ0 368 aa2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 PAXIP1Q6ZW49 1069 aaPredicted RBP2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 NBPF5PQ86XG9 351 aaPredicted RBP2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 DZIP3Q86Y13 1208 aaKnown RBP2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 NUTM1Q86Y26 1132 aa2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 SYNE4Q8N205 404 aa2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 SMC1BQ8NDV3 1235 aa2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 RBM46Q8TBY0 533 aaKnown RBP2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 JARID2Q92833 1246 aaPredicted RBP2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 CFAP44Q96MT7 982 aa2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 SETDB2Q96T68 719 aa2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 ZBTB4Q9P1Z0 1013 aaPredicted RBP2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 LAS1LQ9Y4W2 734 aaKnown RBP2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 GJA3Q9Y6H8 435 aa2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 SOS1Q07889 1333 aaPredicted RBP2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 KIF7Q2M1P5 1343 aa2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 CNTNAP4Q9C0A0 1308 aa2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 RTL1A6NKG5 1358 aa2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 CARMIL3Q8ND23 1372 aa2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 KDM6AO15550 1401 aaPredicted RBP2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 PAPPAQ13219 1627 aa2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 NHSQ6T4R5 1651 aa2.06□□□□□ -2.08
RNU1-42P-201ENST00000364033 SHANK3Q9BYB0 1731 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 LTN1O94822 1766 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 CHD4Q14839 1912 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 A0A087WZG4 1122 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 CCDC85CA6NKD9 419 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 NBPF26B4DH59 902 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 TRAF5O00463 557 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 FOXN1O15353 648 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 PER1O15534 1290 aaPredicted RBP2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 CAMTA2O94983 1202 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 SRGNP10124 158 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 HMGB2P26583 209 aaKnown RBP2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 PDE6BP35913 854 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 EPS15P42566 896 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 VEGFBP49765 207 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 LBX1P52954 281 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 MLLT1Q03111 559 aaPredicted RBP2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 FSTL1Q12841 308 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 DEFB115Q30KQ5 88 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 RTL5Q5HYW3 569 aaPredicted RBP2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 RBM26Q5T8P6 1007 aaKnown RBP2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 SUSD4Q5VX71 490 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 CHADLQ6NUI6 762 aa2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 PRPF40BQ6NWY9 871 aaKnown RBP2.05□□□□□ -2.08
RNU1-42P-201ENST00000364033 NBPF10Q6P3W6 841 aaKnown RBP2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms