RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 RBL2Q08999 1139 aa5.43□□□□□ -1.54
RNU6-1249P-201ENST00000363237 LINC01559Q495D7 138 aa5.43□□□□□ -1.54
RNU6-1249P-201ENST00000363237 COX20Q5RI15 118 aa5.43□□□□□ -1.54
RNU6-1249P-201ENST00000363237 FBF1Q8TES7 1133 aa5.43□□□□□ -1.54
RNU6-1249P-201ENST00000363237 SLC4A9Q96Q91 983 aa5.43□□□□□ -1.54
RNU6-1249P-201ENST00000363237 NIF3L1Q9GZT8 377 aa5.43□□□□□ -1.54
RNU6-1249P-201ENST00000363237 TSPAN10Q9H1Z9 355 aaPredicted RBP5.43□□□□□ -1.54
RNU6-1249P-201ENST00000363237 ACBD3Q9H3P7 528 aa5.43□□□□□ -1.54
RNU6-1249P-201ENST00000363237 WWC3Q9ULE0 1092 aa5.43□□□□□ -1.54
RNU6-1249P-201ENST00000363237 PNMA6FA0A0J9YX94 578 aa5.42□□□□□ -1.54
RNU6-1249P-201ENST00000363237 A0A1W2PRU2 124 aa5.42□□□□□ -1.54
RNU6-1249P-201ENST00000363237 TNFRSF10BO14763 440 aa5.42□□□□□ -1.54
RNU6-1249P-201ENST00000363237 ZPR1O75312 459 aa5.42□□□□□ -1.54
RNU6-1249P-201ENST00000363237 BRD2P25440 801 aaKnown RBP5.42□□□□□ -1.54
RNU6-1249P-201ENST00000363237 DNAJA1P31689 397 aaKnown RBP5.42□□□□□ -1.54
RNU6-1249P-201ENST00000363237 SCTRP47872 440 aa5.42□□□□□ -1.54
RNU6-1249P-201ENST00000363237 ARID5AQ03989 594 aa5.42□□□□□ -1.54
RNU6-1249P-201ENST00000363237 CCDC144BQ3MJ40 725 aa5.42□□□□□ -1.54
RNU6-1249P-201ENST00000363237 VPS37DQ86XT2 251 aa5.42□□□□□ -1.54
RNU6-1249P-201ENST00000363237 WNT2BQ93097 391 aa5.42□□□□□ -1.54
RNU6-1249P-201ENST00000363237 MYO19Q96H55 970 aa5.42□□□□□ -1.54
RNU6-1249P-201ENST00000363237 C2orf49Q9BVC5 232 aaPredicted RBP5.42□□□□□ -1.54
RNU6-1249P-201ENST00000363237 CHMP4AQ9BY43 222 aa5.42□□□□□ -1.54
RNU6-1249P-201ENST00000363237 SLC6A16Q9GZN6 736 aa5.42□□□□□ -1.54
RNU6-1249P-201ENST00000363237 CYLDQ9NQC7 956 aa5.42□□□□□ -1.54
RNU6-1249P-201ENST00000363237 RNF19AQ9NV58 838 aa5.42□□□□□ -1.54
RNU6-1249P-201ENST00000363237 CHMP3Q9Y3E7 222 aa5.42□□□□□ -1.54
RNU6-1249P-201ENST00000363237 MAP4K5Q9Y4K4 846 aa5.42□□□□□ -1.54
RNU6-1249P-201ENST00000363237 AK5Q9Y6K8 562 aa5.42□□□□□ -1.54
RNU6-1249P-201ENST00000363237 ERVH48-1M5A8F1 160 aa5.41□□□□□ -1.54
RNU6-1249P-201ENST00000363237 NEFLP07196 543 aa5.41□□□□□ -1.54
RNU6-1249P-201ENST00000363237 MZF1P28698 734 aaPredicted RBP5.41□□□□□ -1.54
RNU6-1249P-201ENST00000363237 RAB15P59190 212 aa5.41□□□□□ -1.54
RNU6-1249P-201ENST00000363237 INTS6LQ5JSJ4 861 aaKnown RBP5.41□□□□□ -1.54
RNU6-1249P-201ENST00000363237 ZNF654Q8IZM8 581 aa5.41□□□□□ -1.54
RNU6-1249P-201ENST00000363237 GJD3Q8N144 294 aa5.41□□□□□ -1.54
RNU6-1249P-201ENST00000363237 CRELD1Q96HD1 420 aa5.41□□□□□ -1.54
RNU6-1249P-201ENST00000363237 OSBPL3Q9H4L5 887 aa5.41□□□□□ -1.54
RNU6-1249P-201ENST00000363237 INPP5FQ9Y2H2 1132 aa5.41□□□□□ -1.54
RNU6-1249P-201ENST00000363237 EMILIN1Q9Y6C2 1016 aa5.41□□□□□ -1.54
RNU6-1249P-201ENST00000363237 PSMA6P60900 246 aaKnown RBP5.4□□□□□ -1.54
RNU6-1249P-201ENST00000363237 SH3BP2P78314 561 aa5.4□□□□□ -1.54
RNU6-1249P-201ENST00000363237 FOXK2Q01167 660 aa5.4□□□□□ -1.54
RNU6-1249P-201ENST00000363237 ESCO1Q5FWF5 840 aa5.4□□□□□ -1.54
RNU6-1249P-201ENST00000363237 WBP1LQ9NX94 342 aa5.4□□□□□ -1.54
RNU6-1249P-201ENST00000363237 SERTAD1Q9UHV2 236 aa5.4□□□□□ -1.54
RNU6-1249P-201ENST00000363237 DDX41Q9UJV9 622 aaKnown RBP5.4□□□□□ -1.54
RNU6-1249P-201ENST00000363237 POLIQ9UNA4 740 aa5.4□□□□□ -1.54
RNU6-1249P-201ENST00000363237 IQSEC3Q9UPP2 1182 aaPredicted RBP5.4□□□□□ -1.54
RNU6-1249P-201ENST00000363237 A6NJY4 79 aa5.39□□□□□ -1.55
RNU6-1249P-201ENST00000363237 ZBTB24O43167 697 aaPredicted RBP5.39□□□□□ -1.55
RNU6-1249P-201ENST00000363237 TLL1O43897 1013 aa5.39□□□□□ -1.55
RNU6-1249P-201ENST00000363237 GNRH1P01148 92 aa5.39□□□□□ -1.55
RNU6-1249P-201ENST00000363237 VARSP26640 1264 aaKnown RBP5.39□□□□□ -1.55
RNU6-1249P-201ENST00000363237 TNNI2P48788 182 aa5.39□□□□□ -1.55
RNU6-1249P-201ENST00000363237 LSM11P83369 360 aaKnown RBP eCLIP5.39□□□□□ -1.55
RNU6-1249P-201ENST00000363237 DHX9Q08211 1270 aaKnown RBP5.39□□□□□ -1.55
RNU6-1249P-201ENST00000363237 MTFR1Q15390 333 aa5.39□□□□□ -1.55
RNU6-1249P-201ENST00000363237 SDE2Q6IQ49 451 aa5.39□□□□□ -1.55
RNU6-1249P-201ENST00000363237 NYAP1Q6ZVC0 841 aa5.39□□□□□ -1.55
RNU6-1249P-201ENST00000363237 VASH1Q7L8A9 365 aaPredicted RBP5.39□□□□□ -1.55
RNU6-1249P-201ENST00000363237 CYP2U1Q7Z449 544 aa5.39□□□□□ -1.55
RNU6-1249P-201ENST00000363237 SLC9A9Q8IVB4 645 aa5.39□□□□□ -1.55
RNU6-1249P-201ENST00000363237 PMFBP1Q8TBY8 1022 aa5.39□□□□□ -1.55
RNU6-1249P-201ENST00000363237 CSRNP1Q96S65 589 aa5.39□□□□□ -1.55
RNU6-1249P-201ENST00000363237 SETDB2Q96T68 719 aa5.39□□□□□ -1.55
RNU6-1249P-201ENST00000363237 QTRT2Q9H974 415 aaKnown RBP5.39□□□□□ -1.55
RNU6-1249P-201ENST00000363237 ETNK1Q9HBU6 452 aa5.39□□□□□ -1.55
RNU6-1249P-201ENST00000363237 SCHIP1Q9P0W5 487 aaPredicted RBP5.39□□□□□ -1.55
RNU6-1249P-201ENST00000363237 LRFN2Q9ULH4 789 aa5.39□□□□□ -1.55
RNU6-1249P-201ENST00000363237 SPG7Q9UQ90 795 aa5.39□□□□□ -1.55
RNU6-1249P-201ENST00000363237 SBNO2Q9Y2G9 1366 aa5.39□□□□□ -1.55
RNU6-1249P-201ENST00000363237 PCSK2P16519 638 aa5.38□□□□□ -1.55
RNU6-1249P-201ENST00000363237 SMTNP53814 917 aa5.38□□□□□ -1.55
RNU6-1249P-201ENST00000363237 MYT1Q01538 1121 aa5.38□□□□□ -1.55
RNU6-1249P-201ENST00000363237 PTPN12Q05209 780 aaKnown RBP5.38□□□□□ -1.55
RNU6-1249P-201ENST00000363237 C11orf91Q3C1V1 193 aa5.38□□□□□ -1.55
RNU6-1249P-201ENST00000363237 EGFLAMQ63HQ2 1017 aa5.38□□□□□ -1.55
RNU6-1249P-201ENST00000363237 ZNF662Q6ZS27 426 aa5.38□□□□□ -1.55
RNU6-1249P-201ENST00000363237 HS2ST1Q7LGA3 356 aa5.38□□□□□ -1.55
RNU6-1249P-201ENST00000363237 USP48Q86UV5 1035 aa5.38□□□□□ -1.55
RNU6-1249P-201ENST00000363237 DNAJC25Q9H1X3 360 aa5.38□□□□□ -1.55
RNU6-1249P-201ENST00000363237 ZSWIM4Q9H7M6 989 aa5.38□□□□□ -1.55
RNU6-1249P-201ENST00000363237 GIPC1O14908 333 aa5.37□□□□□ -1.55
RNU6-1249P-201ENST00000363237 ZBTB39O15060 712 aa5.37□□□□□ -1.55
RNU6-1249P-201ENST00000363237 STK10O94804 968 aaKnown RBP5.37□□□□□ -1.55
RNU6-1249P-201ENST00000363237 CLSTN1O94985 981 aa5.37□□□□□ -1.55
RNU6-1249P-201ENST00000363237 CTSHP09668 335 aa5.37□□□□□ -1.55
RNU6-1249P-201ENST00000363237 EIF4BP23588 611 aaKnown RBP5.37□□□□□ -1.55
RNU6-1249P-201ENST00000363237 RACK1P63244 317 aaKnown RBP5.37□□□□□ -1.55
RNU6-1249P-201ENST00000363237 DNM1Q05193 864 aaKnown RBP5.37□□□□□ -1.55
RNU6-1249P-201ENST00000363237 PPP1R18Q6NYC8 613 aa5.37□□□□□ -1.55
RNU6-1249P-201ENST00000363237 POTEAQ6S8J7 498 aa5.37□□□□□ -1.55
RNU6-1249P-201ENST00000363237 ATCAYQ86WG3 371 aa5.37□□□□□ -1.55
RNU6-1249P-201ENST00000363237 CFHR5Q9BXR6 569 aa5.37□□□□□ -1.55
RNU6-1249P-201ENST00000363237 HCSTQ9UBK5 93 aa5.37□□□□□ -1.55
RNU6-1249P-201ENST00000363237 FCF1Q9Y324 198 aaKnown RBP5.37□□□□□ -1.55
RNU6-1249P-201ENST00000363237 TBX22Q9Y458 520 aa5.37□□□□□ -1.55
RNU6-1249P-201ENST00000363237 CDK2AP1O14519 115 aa5.36□□□□□ -1.55
RNU6-1249P-201ENST00000363237 STAU1O95793 577 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms