RNA–Protein interactions for RNA: ENST00000362588.1

RNU4-35P-201, Transcript of RNA, U4 small nuclear 35, pseudogene, humanhuman

BASIC

Gene RNU4-35P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-35P-201ENST00000362588 RTF1Q92541 710 aaKnown RBP4.62□□□□□ -1.67
RNU4-35P-201ENST00000362588 ARHGEF1Q92888 912 aaKnown RBP4.62□□□□□ -1.67
RNU4-35P-201ENST00000362588 RTCBQ9Y3I0 505 aaKnown RBP4.62□□□□□ -1.67
RNU4-35P-201ENST00000362588 ZNF330Q9Y3S2 320 aaPredicted RBP4.62□□□□□ -1.67
RNU4-35P-201ENST00000362588 COL11A2P13942 1736 aaPredicted RBP4.62□□□□□ -1.67
RNU4-35P-201ENST00000362588 SOS1Q07889 1333 aaPredicted RBP4.62□□□□□ -1.67
RNU4-35P-201ENST00000362588 MAPK8IP3Q9UPT6 1336 aa4.62□□□□□ -1.67
RNU4-35P-201ENST00000362588 COL15A1P39059 1388 aa4.62□□□□□ -1.67
RNU4-35P-201ENST00000362588 HEG1Q9ULI3 1381 aa4.62□□□□□ -1.67
RNU4-35P-201ENST00000362588 NRXN2Q9P2S2 1712 aa4.61□□□□□ -1.67
RNU4-35P-201ENST00000362588 DLEC1Q9Y238 1755 aa4.61□□□□□ -1.67
RNU4-35P-201ENST00000362588 CCDC88AQ3V6T2 1871 aa4.61□□□□□ -1.67
RNU4-35P-201ENST00000362588 RPS6KA4O75676 772 aa4.61□□□□□ -1.67
RNU4-35P-201ENST00000362588 A1BGP04217 495 aa4.61□□□□□ -1.67
RNU4-35P-201ENST00000362588 MMP10P09238 476 aa4.61□□□□□ -1.67
RNU4-35P-201ENST00000362588 GYS1P13807 737 aa4.61□□□□□ -1.67
RNU4-35P-201ENST00000362588 FKBP8Q14318 412 aa4.61□□□□□ -1.67
RNU4-35P-201ENST00000362588 WDR43Q15061 677 aaKnown RBP eCLIP4.61□□□□□ -1.67
RNU4-35P-201ENST00000362588 TRAPPC3LQ5T215 181 aa4.61□□□□□ -1.67
RNU4-35P-201ENST00000362588 RC3H1Q5TC82 1133 aaKnown RBP4.61□□□□□ -1.67
RNU4-35P-201ENST00000362588 FLAD1Q8NFF5 587 aa4.61□□□□□ -1.67
RNU4-35P-201ENST00000362588 CCDC87Q9NVE4 849 aa4.61□□□□□ -1.67
RNU4-35P-201ENST00000362588 ADAMTS8Q9UP79 889 aa4.61□□□□□ -1.67
RNU4-35P-201ENST00000362588 USP16Q9Y5T5 823 aa4.61□□□□□ -1.67
RNU4-35P-201ENST00000362588 UTRNP46939 3433 aa4.61□□□□□ -1.67
RNU4-35P-201ENST00000362588 ARFGEF1Q9Y6D6 1849 aa4.6□□□□□ -1.67
RNU4-35P-201ENST00000362588 NEFMP07197 916 aa4.6□□□□□ -1.67
RNU4-35P-201ENST00000362588 RFC4P35249 363 aa4.6□□□□□ -1.67
RNU4-35P-201ENST00000362588 TMPOP42166 694 aaKnown RBP4.6□□□□□ -1.67
RNU4-35P-201ENST00000362588 RIPK4P57078 832 aa4.6□□□□□ -1.67
RNU4-35P-201ENST00000362588 DDR1Q08345 913 aa4.6□□□□□ -1.67
RNU4-35P-201ENST00000362588 USPL1Q5W0Q7 1092 aa4.6□□□□□ -1.67
RNU4-35P-201ENST00000362588 FMNL2Q96PY5 1086 aa4.6□□□□□ -1.67
RNU4-35P-201ENST00000362588 BCL2L12Q9HB09 334 aa4.6□□□□□ -1.67
RNU4-35P-201ENST00000362588 USP42Q9H9J4 1324 aaKnown RBP4.6□□□□□ -1.67
RNU4-35P-201ENST00000362588 CARMIL3Q8ND23 1372 aa4.6□□□□□ -1.67
RNU4-35P-201ENST00000362588 C10orf71Q711Q0 1435 aa4.6□□□□□ -1.67
RNU4-35P-201ENST00000362588 PXDNLA1KZ92 1463 aa4.6□□□□□ -1.67
RNU4-35P-201ENST00000362588 ANKRD36CQ5JPF3 1778 aa4.6□□□□□ -1.67
RNU4-35P-201ENST00000362588 NBPF26B4DH59 902 aa4.59□□□□□ -1.67
RNU4-35P-201ENST00000362588 HTATSF1O43719 755 aaKnown RBP4.59□□□□□ -1.67
RNU4-35P-201ENST00000362588 ANXA1P04083 346 aa4.59□□□□□ -1.67
RNU4-35P-201ENST00000362588 YBX3P16989 372 aaKnown RBP eCLIP4.59□□□□□ -1.67
RNU4-35P-201ENST00000362588 ADRA2BP18089 450 aa4.59□□□□□ -1.67
RNU4-35P-201ENST00000362588 TAF7Q15545 349 aaPredicted RBP4.59□□□□□ -1.67
RNU4-35P-201ENST00000362588 GPR162Q16538 588 aa4.59□□□□□ -1.67
RNU4-35P-201ENST00000362588 KRT24Q2M2I5 525 aa4.59□□□□□ -1.67
RNU4-35P-201ENST00000362588 NBPF10Q6P3W6 841 aaKnown RBP4.59□□□□□ -1.67
RNU4-35P-201ENST00000362588 BICDL1Q6ZP65 573 aa4.59□□□□□ -1.67
RNU4-35P-201ENST00000362588 VSIG10Q8N0Z9 540 aa4.59□□□□□ -1.67
RNU4-35P-201ENST00000362588 CCDC24Q8N4L8 307 aa4.59□□□□□ -1.67
RNU4-35P-201ENST00000362588 NBPF15Q8N660 670 aa4.59□□□□□ -1.67
RNU4-35P-201ENST00000362588 RUNDC1Q96C34 613 aa4.59□□□□□ -1.67
RNU4-35P-201ENST00000362588 TNRC6CQ9HCJ0 1690 aaKnown RBP4.59□□□□□ -1.67
RNU4-35P-201ENST00000362588 TRIM35Q9UPQ4 493 aa4.59□□□□□ -1.67
RNU4-35P-201ENST00000362588 TBC1D2BQ9UPU7 963 aa4.59□□□□□ -1.67
RNU4-35P-201ENST00000362588 LAS1LQ9Y4W2 734 aaKnown RBP4.59□□□□□ -1.67
RNU4-35P-201ENST00000362588 GOLGB1Q14789 3259 aaKnown RBP4.59□□□□□ -1.68
RNU4-35P-201ENST00000362588 SBF1O95248 1867 aa4.58□□□□□ -1.68
RNU4-35P-201ENST00000362588 LAMB2P55268 1798 aa4.58□□□□□ -1.68
RNU4-35P-201ENST00000362588 A0A0G2JLW4 131 aa4.58□□□□□ -1.68
RNU4-35P-201ENST00000362588 POLRMTO00411 1230 aaKnown RBP4.58□□□□□ -1.68
RNU4-35P-201ENST00000362588 APAF1O14727 1248 aa4.58□□□□□ -1.68
RNU4-35P-201ENST00000362588 ANP32CO43423 234 aa4.58□□□□□ -1.68
RNU4-35P-201ENST00000362588 ZPR1O75312 459 aa4.58□□□□□ -1.68
RNU4-35P-201ENST00000362588 STARD3NLO95772 234 aa4.58□□□□□ -1.68
RNU4-35P-201ENST00000362588 EIF5P55010 431 aaKnown RBP4.58□□□□□ -1.68
RNU4-35P-201ENST00000362588 EIF4A1P60842 406 aaKnown RBP4.58□□□□□ -1.68
RNU4-35P-201ENST00000362588 NFIXQ14938 502 aa4.58□□□□□ -1.68
RNU4-35P-201ENST00000362588 TBC1D9BQ66K14 1250 aa4.58□□□□□ -1.68
RNU4-35P-201ENST00000362588 NGEFQ8N5V2 710 aa4.58□□□□□ -1.68
RNU4-35P-201ENST00000362588 NECTIN2Q92692 538 aa4.58□□□□□ -1.68
RNU4-35P-201ENST00000362588 MRS2Q9HD23 443 aa4.58□□□□□ -1.68
RNU4-35P-201ENST00000362588 NARFQ9UHQ1 456 aa4.58□□□□□ -1.68
RNU4-35P-201ENST00000362588 TSPYL4Q9UJ04 414 aa4.58□□□□□ -1.68
RNU4-35P-201ENST00000362588 PARP3Q9Y6F1 533 aa4.58□□□□□ -1.68
RNU4-35P-201ENST00000362588 TAF1P21675 1872 aa4.58□□□□□ -1.68
RNU4-35P-201ENST00000362588 SLX4Q8IY92 1834 aa4.58□□□□□ -1.68
RNU4-35P-201ENST00000362588 ARFGEF2Q9Y6D5 1785 aa4.58□□□□□ -1.68
RNU4-35P-201ENST00000362588 FAM177BA6PVY3 158 aa4.57□□□□□ -1.68
RNU4-35P-201ENST00000362588 GIGYF1O75420 1035 aaPredicted RBP4.57□□□□□ -1.68
RNU4-35P-201ENST00000362588 CAMTA2O94983 1202 aa4.57□□□□□ -1.68
RNU4-35P-201ENST00000362588 SNRPA1P09661 255 aaKnown RBP4.57□□□□□ -1.68
RNU4-35P-201ENST00000362588 MYL6BP14649 208 aa4.57□□□□□ -1.68
RNU4-35P-201ENST00000362588 DPEP1P16444 411 aa4.57□□□□□ -1.68
RNU4-35P-201ENST00000362588 EIF2S2P20042 333 aaKnown RBP4.57□□□□□ -1.68
RNU4-35P-201ENST00000362588 YY1P25490 414 aa4.57□□□□□ -1.68
RNU4-35P-201ENST00000362588 TM4SF1P30408 202 aa4.57□□□□□ -1.68
RNU4-35P-201ENST00000362588 CHRNA5P30532 468 aa4.57□□□□□ -1.68
RNU4-35P-201ENST00000362588 IL6STP40189 918 aaPredicted RBP4.57□□□□□ -1.68
RNU4-35P-201ENST00000362588 PROSER3Q2NL68 480 aa4.57□□□□□ -1.68
RNU4-35P-201ENST00000362588 TTLL7Q6ZT98 887 aa4.57□□□□□ -1.68
RNU4-35P-201ENST00000362588 DZIP3Q86Y13 1208 aaKnown RBP4.57□□□□□ -1.68
RNU4-35P-201ENST00000362588 NLGN1Q8N2Q7 840 aa4.57□□□□□ -1.68
RNU4-35P-201ENST00000362588 ZNF428Q96B54 188 aa4.57□□□□□ -1.68
RNU4-35P-201ENST00000362588 PNNQ9H307 717 aaKnown RBP4.57□□□□□ -1.68
RNU4-35P-201ENST00000362588 SALL2Q9Y467 1007 aaPredicted RBP4.57□□□□□ -1.68
RNU4-35P-201ENST00000362588 CD2APQ9Y5K6 639 aa4.57□□□□□ -1.68
RNU4-35P-201ENST00000362588 TIAM2Q8IVF5 1701 aa4.56□□□□□ -1.68
RNU4-35P-201ENST00000362588 DCAF8L1A6NGE4 600 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms