RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 PSMA6P60900 246 aaKnown RBP9.47□□□□□ -0.89
RNU4-39P-201ENST00000362455 RELBQ01201 579 aa9.47□□□□□ -0.89
RNU4-39P-201ENST00000362455 EIF4G1Q04637 1599 aaKnown RBP9.46□□□□□ -0.89
RNU4-39P-201ENST00000362455 CENPCQ03188 943 aa9.46□□□□□ -0.9
RNU4-39P-201ENST00000362455 ECM1Q16610 540 aa9.46□□□□□ -0.9
RNU4-39P-201ENST00000362455 NOM1Q5C9Z4 860 aaKnown RBP9.46□□□□□ -0.9
RNU4-39P-201ENST00000362455 FHDC1Q9C0D6 1143 aaPredicted RBP9.46□□□□□ -0.9
RNU4-39P-201ENST00000362455 AMOTL2Q9Y2J4 779 aa9.46□□□□□ -0.9
RNU4-39P-201ENST00000362455 C16orf46Q6P387 395 aa9.45□□□□□ -0.9
RNU4-39P-201ENST00000362455 NBPF15Q8N660 670 aa9.45□□□□□ -0.9
RNU4-39P-201ENST00000362455 NLRP3Q96P20 1036 aa9.45□□□□□ -0.9
RNU4-39P-201ENST00000362455 SAP130Q9H0E3 1048 aa9.45□□□□□ -0.9
RNU4-39P-201ENST00000362455 ZNF395Q9H8N7 513 aaPredicted RBP9.45□□□□□ -0.9
RNU4-39P-201ENST00000362455 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.45□□□□□ -0.9
RNU4-39P-201ENST00000362455 SCRIBQ14160 1630 aa9.45□□□□□ -0.9
RNU4-39P-201ENST00000362455 ARHGAP4P98171 946 aa9.44□□□□□ -0.9
RNU4-39P-201ENST00000362455 MEIOBQ8N635 442 aa9.44□□□□□ -0.9
RNU4-39P-201ENST00000362455 CHMP3Q9Y3E7 222 aa9.44□□□□□ -0.9
RNU4-39P-201ENST00000362455 ERCC3P19447 782 aa9.43□□□□□ -0.9
RNU4-39P-201ENST00000362455 POTEAQ6S8J7 498 aa9.43□□□□□ -0.9
RNU4-39P-201ENST00000362455 HPS1Q92902 700 aa9.43□□□□□ -0.9
RNU4-39P-201ENST00000362455 SERTM1A2A2V5 107 aa9.42□□□□□ -0.9
RNU4-39P-201ENST00000362455 EML1O00423 815 aa9.42□□□□□ -0.9
RNU4-39P-201ENST00000362455 NPR3P17342 541 aa9.42□□□□□ -0.9
RNU4-39P-201ENST00000362455 TEAD4Q15561 434 aa9.42□□□□□ -0.9
RNU4-39P-201ENST00000362455 COX20Q5RI15 118 aa9.42□□□□□ -0.9
RNU4-39P-201ENST00000362455 SH3PXD2AQ5TCZ1 1133 aa9.42□□□□□ -0.9
RNU4-39P-201ENST00000362455 ZNF295-AS1Q8N0V1 137 aa9.42□□□□□ -0.9
RNU4-39P-201ENST00000362455 ZDHHC1Q8WTX9 485 aa9.42□□□□□ -0.9
RNU4-39P-201ENST00000362455 QTRT2Q9H974 415 aaKnown RBP9.42□□□□□ -0.9
RNU4-39P-201ENST00000362455 CABP1Q9NZU7 370 aa9.42□□□□□ -0.9
RNU4-39P-201ENST00000362455 GFRA3O60609 400 aa9.41□□□□□ -0.9
RNU4-39P-201ENST00000362455 FAM13AO94988 1023 aa9.41□□□□□ -0.9
RNU4-39P-201ENST00000362455 MPSTP25325 297 aa9.41□□□□□ -0.9
RNU4-39P-201ENST00000362455 MAPK1P28482 360 aa9.41□□□□□ -0.9
RNU4-39P-201ENST00000362455 NOS2P35228 1153 aa9.41□□□□□ -0.9
RNU4-39P-201ENST00000362455 PPARGC1BQ86YN6 1023 aaKnown RBP9.41□□□□□ -0.9
RNU4-39P-201ENST00000362455 NGLY1Q96IV0 654 aa9.41□□□□□ -0.9
RNU4-39P-201ENST00000362455 ZSCAN10Q96SZ4 725 aaPredicted RBP9.41□□□□□ -0.9
RNU4-39P-201ENST00000362455 DCTN4Q9UJW0 460 aa9.41□□□□□ -0.9
RNU4-39P-201ENST00000362455 ZNF232Q9UNY5 417 aa9.41□□□□□ -0.9
RNU4-39P-201ENST00000362455 ANKRD33BA6NCL7 494 aa9.4□□□□□ -0.9
RNU4-39P-201ENST00000362455 TNFRSF10BO14763 440 aa9.4□□□□□ -0.9
RNU4-39P-201ENST00000362455 HIRAP54198 1017 aaPredicted RBP9.4□□□□□ -0.9
RNU4-39P-201ENST00000362455 L3MBTL2Q969R5 705 aa9.4□□□□□ -0.9
RNU4-39P-201ENST00000362455 LRFN2Q9ULH4 789 aa9.4□□□□□ -0.9
RNU4-39P-201ENST00000362455 PARP3Q9Y6F1 533 aa9.4□□□□□ -0.9
RNU4-39P-201ENST00000362455 NRG2O14511 850 aaPredicted RBP9.39□□□□□ -0.91
RNU4-39P-201ENST00000362455 LAPTM4AQ15012 233 aa9.39□□□□□ -0.91
RNU4-39P-201ENST00000362455 TMEM214Q6NUQ4 689 aaKnown RBP9.39□□□□□ -0.91
RNU4-39P-201ENST00000362455 MYO19Q96H55 970 aa9.39□□□□□ -0.91
RNU4-39P-201ENST00000362455 TSEN34Q9BSV6 310 aaKnown RBP9.39□□□□□ -0.91
RNU4-39P-201ENST00000362455 HCN4Q9Y3Q4 1203 aa9.39□□□□□ -0.91
RNU4-39P-201ENST00000362455 FAM187AA6NFU0 413 aa9.38□□□□□ -0.91
RNU4-39P-201ENST00000362455 GTF2E1P29083 439 aaPredicted RBP9.38□□□□□ -0.91
RNU4-39P-201ENST00000362455 ALDH16A1Q8IZ83 802 aa9.38□□□□□ -0.91
RNU4-39P-201ENST00000362455 RHBDD1Q8TEB9 315 aa9.38□□□□□ -0.91
RNU4-39P-201ENST00000362455 INSM2Q96T92 566 aaPredicted RBP9.38□□□□□ -0.91
RNU4-39P-201ENST00000362455 NIFKQ9BYG3 293 aaKnown RBP9.38□□□□□ -0.91
RNU4-39P-201ENST00000362455 GRIP2Q9C0E4 1043 aa9.38□□□□□ -0.91
RNU4-39P-201ENST00000362455 STIM2Q9P246 746 aa9.38□□□□□ -0.91
RNU4-39P-201ENST00000362455 RBM47A0AV96 593 aaKnown RBP9.37□□□□□ -0.91
RNU4-39P-201ENST00000362455 CAPN5O15484 640 aaPredicted RBP9.37□□□□□ -0.91
RNU4-39P-201ENST00000362455 GPC1P35052 558 aa9.37□□□□□ -0.91
RNU4-39P-201ENST00000362455 SLC27A3Q5K4L6 730 aa9.37□□□□□ -0.91
RNU4-39P-201ENST00000362455 NPAS4Q8IUM7 802 aa9.37□□□□□ -0.91
RNU4-39P-201ENST00000362455 ASB16Q96NS5 453 aa9.37□□□□□ -0.91
RNU4-39P-201ENST00000362455 SPINT1O43278 529 aa9.36□□□□□ -0.91
RNU4-39P-201ENST00000362455 DGAT1O75907 488 aa9.36□□□□□ -0.91
RNU4-39P-201ENST00000362455 EIF1AXP47813 144 aaKnown RBP9.36□□□□□ -0.91
RNU4-39P-201ENST00000362455 RNF144AP50876 292 aaPredicted RBP9.36□□□□□ -0.91
RNU4-39P-201ENST00000362455 LINC00528Q8N1L1 170 aa9.36□□□□□ -0.91
RNU4-39P-201ENST00000362455 PHACTR1Q9C0D0 580 aa9.36□□□□□ -0.91
RNU4-39P-201ENST00000362455 RTN1Q16799 776 aa9.35□□□□□ -0.91
RNU4-39P-201ENST00000362455 PKDCCQ504Y2 493 aa9.35□□□□□ -0.91
RNU4-39P-201ENST00000362455 FAM26DQ5JW98 314 aa9.35□□□□□ -0.91
RNU4-39P-201ENST00000362455 GNASQ5JWF2 1037 aa9.35□□□□□ -0.91
RNU4-39P-201ENST00000362455 ZSCAN29Q8IWY8 852 aaPredicted RBP9.35□□□□□ -0.91
RNU4-39P-201ENST00000362455 BCL2L13Q9BXK5 485 aa9.35□□□□□ -0.91
RNU4-39P-201ENST00000362455 POLMQ9NP87 494 aaPredicted RBP9.35□□□□□ -0.91
RNU4-39P-201ENST00000362455 E9PSI1 815 aa9.34□□□□□ -0.91
RNU4-39P-201ENST00000362455 UPP2O95045 317 aa9.34□□□□□ -0.91
RNU4-39P-201ENST00000362455 CTSOP43234 321 aaPredicted RBP9.34□□□□□ -0.91
RNU4-39P-201ENST00000362455 PLA2G4AP47712 749 aa9.34□□□□□ -0.91
RNU4-39P-201ENST00000362455 DGKZQ13574 1117 aa9.34□□□□□ -0.91
RNU4-39P-201ENST00000362455 C4orf17Q53FE4 359 aa9.34□□□□□ -0.91
RNU4-39P-201ENST00000362455 ABTB2Q8N961 1025 aa9.34□□□□□ -0.91
RNU4-39P-201ENST00000362455 IRX2Q9BZI1 471 aaPredicted RBP9.34□□□□□ -0.91
RNU4-39P-201ENST00000362455 UNCXA6NJT0 531 aa9.33□□□□□ -0.92
RNU4-39P-201ENST00000362455 ZBTB39O15060 712 aa9.33□□□□□ -0.92
RNU4-39P-201ENST00000362455 NDUFB5O43674 189 aa9.33□□□□□ -0.92
RNU4-39P-201ENST00000362455 AVPP01185 164 aa9.33□□□□□ -0.92
RNU4-39P-201ENST00000362455 BRD2P25440 801 aaKnown RBP9.33□□□□□ -0.92
RNU4-39P-201ENST00000362455 TXLNAP40222 546 aa9.33□□□□□ -0.92
RNU4-39P-201ENST00000362455 AAMPQ13685 434 aa9.33□□□□□ -0.92
RNU4-39P-201ENST00000362455 C11orf91Q3C1V1 193 aa9.33□□□□□ -0.92
RNU4-39P-201ENST00000362455 ALKBH2Q6NS38 261 aa9.33□□□□□ -0.92
RNU4-39P-201ENST00000362455 RGL4Q8IZJ4 473 aa9.33□□□□□ -0.92
RNU4-39P-201ENST00000362455 KLK14Q9P0G3 267 aa9.33□□□□□ -0.92
RNU4-39P-201ENST00000362455 BRPF3Q9ULD4 1205 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms