RNA–Protein interactions for RNA: ENST00000358536.8

PLXNB1-202, Transcript of plexin B1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLXNB1, Length 7,308 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-202ENST00000358536 NUP88Q99567 741 aaPredicted RBP17.8■□□□□ 0.44
PLXNB1-202ENST00000358536 PRG4Q92954 1404 aaPredicted RBP17.8■□□□□ 0.44
PLXNB1-202ENST00000358536 RPGRQ92834 1020 aaKnown RBP17.8■□□□□ 0.44
PLXNB1-202ENST00000358536 URI1O94763 535 aaPredicted RBP17.79■□□□□ 0.44
PLXNB1-202ENST00000358536 SLC5A1P13866 664 aa17.79■□□□□ 0.44
PLXNB1-202ENST00000358536 TMEM87AQ8NBN3 555 aa17.79■□□□□ 0.44
PLXNB1-202ENST00000358536 LARP6Q9BRS8 491 aaKnown RBP17.79■□□□□ 0.44
PLXNB1-202ENST00000358536 TDRD12Q587J7 1177 aaKnown RBP17.79■□□□□ 0.44
PLXNB1-202ENST00000358536 ATAD2Q6PL18 1390 aa17.79■□□□□ 0.44
PLXNB1-202ENST00000358536 CCT2P78371 535 aaKnown RBP17.79■□□□□ 0.44
PLXNB1-202ENST00000358536 UBE4AQ14139 1066 aa17.79■□□□□ 0.44
PLXNB1-202ENST00000358536 ZSCAN12O43309 604 aa17.79■□□□□ 0.44
PLXNB1-202ENST00000358536 FGFR1OPO95684 399 aaKnown RBP17.79■□□□□ 0.44
PLXNB1-202ENST00000358536 PDCL2Q8N4E4 241 aa17.79■□□□□ 0.44
PLXNB1-202ENST00000358536 KCNH5Q8NCM2 988 aa17.79■□□□□ 0.44
PLXNB1-202ENST00000358536 USP8P40818 1118 aa17.79■□□□□ 0.44
PLXNB1-202ENST00000358536 RAB34Q9BZG1 259 aa17.79■□□□□ 0.44
PLXNB1-202ENST00000358536 RAPGEF3O95398 923 aa17.78■□□□□ 0.44
PLXNB1-202ENST00000358536 PDIA4P13667 645 aaKnown RBP17.78■□□□□ 0.44
PLXNB1-202ENST00000358536 SLC4A8Q2Y0W8 1093 aa17.78■□□□□ 0.44
PLXNB1-202ENST00000358536 ADAMTS2O95450 1211 aa17.78■□□□□ 0.44
PLXNB1-202ENST00000358536 TRMT112Q9UI30 125 aaKnown RBP17.78■□□□□ 0.44
PLXNB1-202ENST00000358536 CCDC144CPQ8IYA2 1237 aa17.78■□□□□ 0.44
PLXNB1-202ENST00000358536 PSMD1Q99460 953 aa17.78■□□□□ 0.44
PLXNB1-202ENST00000358536 GBP3Q9H0R5 595 aa17.78■□□□□ 0.44
PLXNB1-202ENST00000358536 IFIT3O14879 490 aaKnown RBP17.78■□□□□ 0.44
PLXNB1-202ENST00000358536 WDHD1O75717 1129 aaPredicted RBP17.78■□□□□ 0.44
PLXNB1-202ENST00000358536 CCDC183Q5T5S1 534 aa17.78■□□□□ 0.44
PLXNB1-202ENST00000358536 CNNM3Q8NE01 707 aa17.78■□□□□ 0.44
PLXNB1-202ENST00000358536 SHTN1A0MZ66 631 aa17.77■□□□□ 0.44
PLXNB1-202ENST00000358536 ESPNB1AK53 854 aa17.77■□□□□ 0.44
PLXNB1-202ENST00000358536 PRKCSHP14314 528 aaPredicted RBP17.77■□□□□ 0.44
PLXNB1-202ENST00000358536 CTNNA2P26232 953 aa17.77■□□□□ 0.44
PLXNB1-202ENST00000358536 SPTY2D1Q68D10 685 aaPredicted RBP17.77■□□□□ 0.44
PLXNB1-202ENST00000358536 MAP9Q49MG5 647 aa17.77■□□□□ 0.44
PLXNB1-202ENST00000358536 FERMT2Q96AC1 680 aa17.77■□□□□ 0.44
PLXNB1-202ENST00000358536 TAF7Q15545 349 aaPredicted RBP17.77■□□□□ 0.43
PLXNB1-202ENST00000358536 HOOK3Q86VS8 718 aa17.77■□□□□ 0.43
PLXNB1-202ENST00000358536 PHAXQ9H814 394 aaKnown RBP17.77■□□□□ 0.43
PLXNB1-202ENST00000358536 VAT1LQ9HCJ6 419 aa17.76■□□□□ 0.43
PLXNB1-202ENST00000358536 F6X3S4 739 aa17.76■□□□□ 0.43
PLXNB1-202ENST00000358536 STAMBPO95630 424 aa17.76■□□□□ 0.43
PLXNB1-202ENST00000358536 WAPLQ7Z5K2 1190 aa17.76■□□□□ 0.43
PLXNB1-202ENST00000358536 CCDC194A0A1B0GVG4 234 aa17.76■□□□□ 0.43
PLXNB1-202ENST00000358536 GOLGA8AA7E2F4 631 aa17.76■□□□□ 0.43
PLXNB1-202ENST00000358536 GOLGA8BA8MQT2 603 aa17.76■□□□□ 0.43
PLXNB1-202ENST00000358536 MAPK8IP2Q13387 824 aaPredicted RBP17.76■□□□□ 0.43
PLXNB1-202ENST00000358536 ERICH3Q5RHP9 1530 aa17.76■□□□□ 0.43
PLXNB1-202ENST00000358536 NF2P35240 595 aa17.76■□□□□ 0.43
PLXNB1-202ENST00000358536 CLIP2Q9UDT6 1046 aa17.76■□□□□ 0.43
PLXNB1-202ENST00000358536 CATIPQ7Z7H3 387 aa17.75■□□□□ 0.43
PLXNB1-202ENST00000358536 TRMT1Q9NXH9 659 aaKnown RBP17.75■□□□□ 0.43
PLXNB1-202ENST00000358536 COMMD10Q9Y6G5 202 aa17.75■□□□□ 0.43
PLXNB1-202ENST00000358536 SLFN5Q08AF3 891 aa17.75■□□□□ 0.43
PLXNB1-202ENST00000358536 GPTP24298 496 aa17.75■□□□□ 0.43
PLXNB1-202ENST00000358536 EHMT1Q9H9B1 1298 aa17.75■□□□□ 0.43
PLXNB1-202ENST00000358536 CKAP2LQ8IYA6 745 aa17.75■□□□□ 0.43
PLXNB1-202ENST00000358536 USO1O60763 962 aaKnown RBP17.75■□□□□ 0.43
PLXNB1-202ENST00000358536 KIF18AQ8NI77 898 aa17.75■□□□□ 0.43
PLXNB1-202ENST00000358536 CCDC61Q9Y6R9 512 aa17.74■□□□□ 0.43
PLXNB1-202ENST00000358536 ANKRD18BA2A2Z9 1011 aa17.74■□□□□ 0.43
PLXNB1-202ENST00000358536 KAT6BQ8WYB5 2073 aa17.74■□□□□ 0.43
PLXNB1-202ENST00000358536 BAG4O95429 457 aaKnown RBP17.74■□□□□ 0.43
PLXNB1-202ENST00000358536 HMGB1P09429 215 aaKnown RBP17.74■□□□□ 0.43
PLXNB1-202ENST00000358536 PAFAH1B1P43034 410 aa17.74■□□□□ 0.43
PLXNB1-202ENST00000358536 MTIF2P46199 727 aaKnown RBP17.74■□□□□ 0.43
PLXNB1-202ENST00000358536 SCAND2PQ9GZW5 306 aaPredicted RBP17.74■□□□□ 0.43
PLXNB1-202ENST00000358536 A0A087WZG4 1122 aa17.74■□□□□ 0.43
PLXNB1-202ENST00000358536 GCOM1H8Y6P7 765 aaPredicted RBP17.73■□□□□ 0.43
PLXNB1-202ENST00000358536 MYZAPP0CAP1 466 aa17.73■□□□□ 0.43
PLXNB1-202ENST00000358536 DRC1Q96MC2 740 aa17.73■□□□□ 0.43
PLXNB1-202ENST00000358536 C6orf229H3BNL8 230 aa17.73■□□□□ 0.43
PLXNB1-202ENST00000358536 TCERG1LQ5VWI1 586 aa17.73■□□□□ 0.43
PLXNB1-202ENST00000358536 CCDC184Q52MB2 194 aa17.73■□□□□ 0.43
PLXNB1-202ENST00000358536 TMCO5BA8MYB1 307 aa17.73■□□□□ 0.43
PLXNB1-202ENST00000358536 SH2B1Q9NRF2 756 aaPredicted RBP17.73■□□□□ 0.43
PLXNB1-202ENST00000358536 PRPF4BQ13523 1007 aaKnown RBP17.72■□□□□ 0.43
PLXNB1-202ENST00000358536 ISM2Q6H9L7 571 aa17.72■□□□□ 0.43
PLXNB1-202ENST00000358536 SLF2Q8IX21 1173 aa17.72■□□□□ 0.43
PLXNB1-202ENST00000358536 FEZ1Q99689 392 aa17.72■□□□□ 0.43
PLXNB1-202ENST00000358536 BIN1O00499 593 aa17.72■□□□□ 0.43
PLXNB1-202ENST00000358536 RNF41Q9H4P4 317 aaPredicted RBP17.72■□□□□ 0.43
PLXNB1-202ENST00000358536 PLEKHH2Q8IVE3 1493 aa17.72■□□□□ 0.43
PLXNB1-202ENST00000358536 FSIP1Q8NA03 581 aa17.72■□□□□ 0.43
PLXNB1-202ENST00000358536 PUF60Q9UHX1 559 aaKnown RBP17.72■□□□□ 0.43
PLXNB1-202ENST00000358536 KIF2AO00139 706 aaPredicted RBP17.72■□□□□ 0.43
PLXNB1-202ENST00000358536 SPECC1Q5M775 1068 aa17.72■□□□□ 0.43
PLXNB1-202ENST00000358536 SAMM50Q9Y512 469 aa17.72■□□□□ 0.43
PLXNB1-202ENST00000358536 YEATS4O95619 227 aa17.72■□□□□ 0.43
PLXNB1-202ENST00000358536 CALML4Q96GE6 196 aa17.72■□□□□ 0.43
PLXNB1-202ENST00000358536 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.72■□□□□ 0.432e-8■■□□□ 12.9
PLXNB1-202ENST00000358536 GRIN2BQ13224 1484 aa17.72■□□□□ 0.43
PLXNB1-202ENST00000358536 MCM3P25205 808 aa17.71■□□□□ 0.43
PLXNB1-202ENST00000358536 HLTFQ14527 1009 aaKnown RBP eCLIP17.71■□□□□ 0.43
PLXNB1-202ENST00000358536 RNF187Q5TA31 235 aaPredicted RBP17.71■□□□□ 0.43
PLXNB1-202ENST00000358536 SYCP3Q8IZU3 236 aa17.71■□□□□ 0.43
PLXNB1-202ENST00000358536 POLR3GO15318 223 aaPredicted RBP17.71■□□□□ 0.43
PLXNB1-202ENST00000358536 CBX1P83916 185 aa17.71■□□□□ 0.43
PLXNB1-202ENST00000358536 CEP63Q96MT8 703 aa17.71■□□□□ 0.42
PLXNB1-202ENST00000358536 NOP2P46087 812 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms