RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 CAMKK2Q96RR4 588 aa32.71■■■□□ 2.83
SSBP3-202ENST00000357475 BCL2L13Q9BXK5 485 aa32.7■■■□□ 2.83
SSBP3-202ENST00000357475 SOS1Q07889 1333 aaPredicted RBP32.7■■■□□ 2.82
SSBP3-202ENST00000357475 A1BGP04217 495 aa32.69■■■□□ 2.82
SSBP3-202ENST00000357475 RREB1Q92766 1687 aa32.69■■■□□ 2.82
SSBP3-202ENST00000357475 ANXA1P04083 346 aa32.68■■■□□ 2.82
SSBP3-202ENST00000357475 CT47B1P0C2W7 299 aaPredicted RBP32.68■■■□□ 2.82
SSBP3-202ENST00000357475 C4BP0C0L5 1744 aa32.68■■■□□ 2.82
SSBP3-202ENST00000357475 RARSP54136 660 aaKnown RBP32.67■■■□□ 2.82
SSBP3-202ENST00000357475 PROSER3Q2NL68 480 aa32.67■■■□□ 2.82
SSBP3-202ENST00000357475 SSH1Q8WYL5 1049 aa32.67■■■□□ 2.82
SSBP3-202ENST00000357475 CHPF2Q9P2E5 772 aa32.67■■■□□ 2.82
SSBP3-202ENST00000357475 BAG6P46379 1132 aa32.67■■■□□ 2.82
SSBP3-202ENST00000357475 SLC27A3Q5K4L6 730 aa32.67■■■□□ 2.82
SSBP3-202ENST00000357475 TEX13AQ9BXU3 409 aaPredicted RBP32.67■■■□□ 2.82
SSBP3-202ENST00000357475 NBPF26B4DH59 902 aa32.66■■■□□ 2.82
SSBP3-202ENST00000357475 PDIA6Q15084 440 aa32.66■■■□□ 2.82
SSBP3-202ENST00000357475 NBPF14Q5TI25 921 aa32.66■■■□□ 2.82
SSBP3-202ENST00000357475 NBPF10Q6P3W6 841 aaKnown RBP32.66■■■□□ 2.82
SSBP3-202ENST00000357475 CCDC125Q86Z20 511 aa32.66■■■□□ 2.82
SSBP3-202ENST00000357475 NBPF15Q8N660 670 aa32.66■■■□□ 2.82
SSBP3-202ENST00000357475 RCAN3Q9UKA8 241 aa32.65■■■□□ 2.82
SSBP3-202ENST00000357475 NUP188Q5SRE5 1749 aa32.64■■■□□ 2.82
SSBP3-202ENST00000357475 BCAR3O75815 825 aa32.64■■■□□ 2.82
SSBP3-202ENST00000357475 STARD3NLO95772 234 aa32.64■■■□□ 2.82
SSBP3-202ENST00000357475 CRKLP46109 303 aaKnown RBP32.64■■■□□ 2.82
SSBP3-202ENST00000357475 CCDC30Q5VVM6 783 aa32.64■■■□□ 2.82
SSBP3-202ENST00000357475 INTS5Q6P9B9 1019 aaKnown RBP32.64■■■□□ 2.82
SSBP3-202ENST00000357475 ZBTB1Q9Y2K1 713 aa32.63■■■□□ 2.81
SSBP3-202ENST00000357475 MYL6BP14649 208 aa32.61■■■□□ 2.81
SSBP3-202ENST00000357475 SMIM5Q71RC9 77 aa32.61■■■□□ 2.81
SSBP3-202ENST00000357475 CACNA1FO60840 1977 aa32.61■■■□□ 2.81
SSBP3-202ENST00000357475 CANXP27824 592 aaKnown RBP32.6■■■□□ 2.81
SSBP3-202ENST00000357475 MRPL50Q8N5N7 158 aaKnown RBP32.6■■■□□ 2.81
SSBP3-202ENST00000357475 SMC4Q9NTJ3 1288 aa32.6■■■□□ 2.81
SSBP3-202ENST00000357475 CCDC87Q9NVE4 849 aa32.6■■■□□ 2.81
SSBP3-202ENST00000357475 SLC4A2P04920 1241 aa32.59■■■□□ 2.81
SSBP3-202ENST00000357475 ALDH1L2Q3SY69 923 aa32.59■■■□□ 2.81
SSBP3-202ENST00000357475 G2E3Q7L622 706 aa32.59■■■□□ 2.81
SSBP3-202ENST00000357475 LRP10Q7Z4F1 713 aa32.59■■■□□ 2.81
SSBP3-202ENST00000357475 AMIGO3Q86WK7 504 aa32.59■■■□□ 2.81
SSBP3-202ENST00000357475 ZNF428Q96B54 188 aa32.59■■■□□ 2.81
SSBP3-202ENST00000357475 CNTNAP4Q9C0A0 1308 aa32.58■■■□□ 2.81
SSBP3-202ENST00000357475 DDX21Q9NR30 783 aaKnown RBP eCLIP32.58■■■□□ 2.81
SSBP3-202ENST00000357475 DBF4Q9UBU7 674 aaPredicted RBP32.58■■■□□ 2.81
SSBP3-202ENST00000357475 STK31Q9BXU1 1019 aa32.57■■■□□ 2.8
SSBP3-202ENST00000357475 PHAXQ9H814 394 aaKnown RBP32.57■■■□□ 2.8
SSBP3-202ENST00000357475 TUBGCP6Q96RT7 1819 aa32.57■■■□□ 2.8
SSBP3-202ENST00000357475 UBR3Q6ZT12 1888 aa32.57■■■□□ 2.8
SSBP3-202ENST00000357475 ZNF827Q17R98 1081 aa32.56■■■□□ 2.8
SSBP3-202ENST00000357475 ERBB4Q15303 1308 aa32.55■■■□□ 2.8
SSBP3-202ENST00000357475 CENPBP07199 599 aaPredicted RBP32.55■■■□□ 2.8
SSBP3-202ENST00000357475 RC3H1Q5TC82 1133 aaKnown RBP32.53■■■□□ 2.8
SSBP3-202ENST00000357475 ZNF330Q9Y3S2 320 aaPredicted RBP32.53■■■□□ 2.8
SSBP3-202ENST00000357475 GNPATO15228 680 aa32.52■■■□□ 2.8
SSBP3-202ENST00000357475 ANO8Q9HCE9 1232 aaPredicted RBP32.52■■■□□ 2.8
SSBP3-202ENST00000357475 AKT1S1Q96B36 256 aa32.51■■■□□ 2.79
SSBP3-202ENST00000357475 AK7Q96M32 723 aa32.51■■■□□ 2.79
SSBP3-202ENST00000357475 CHMP4AQ9BY43 222 aa32.51■■■□□ 2.79
SSBP3-202ENST00000357475 EIF5P55010 431 aaKnown RBP32.5■■■□□ 2.79
SSBP3-202ENST00000357475 HYPKQ9NX55 129 aa32.5■■■□□ 2.79
SSBP3-202ENST00000357475 AIMP1Q12904 312 aaKnown RBP32.49■■■□□ 2.79
SSBP3-202ENST00000357475 XAGE3Q8WTP9 111 aa32.49■■■□□ 2.79
SSBP3-202ENST00000357475 NOB1Q9ULX3 412 aaKnown RBP32.49■■■□□ 2.79
SSBP3-202ENST00000357475 IL6STP40189 918 aaPredicted RBP32.48■■■□□ 2.79
SSBP3-202ENST00000357475 BRPF1P55201 1214 aaPredicted RBP32.48■■■□□ 2.79
SSBP3-202ENST00000357475 FLIIQ13045 1269 aa32.48■■■□□ 2.79
SSBP3-202ENST00000357475 TTLL7Q6ZT98 887 aa32.48■■■□□ 2.79
SSBP3-202ENST00000357475 COPS6Q7L5N1 327 aa32.48■■■□□ 2.79
SSBP3-202ENST00000357475 C4AP0C0L4 1744 aa32.48■■■□□ 2.79
SSBP3-202ENST00000357475 PLIN1O60240 522 aa32.47■■■□□ 2.79
SSBP3-202ENST00000357475 RPS6KA4O75676 772 aa32.47■■■□□ 2.79
SSBP3-202ENST00000357475 FRAT1Q92837 279 aaPredicted RBP32.47■■■□□ 2.79
SSBP3-202ENST00000357475 TNNQ9UQP3 1299 aa32.47■■■□□ 2.79
SSBP3-202ENST00000357475 COL15A1P39059 1388 aa32.46■■■□□ 2.79
SSBP3-202ENST00000357475 PHF14O94880 888 aa32.46■■■□□ 2.79
SSBP3-202ENST00000357475 SUPT16HQ9Y5B9 1047 aaKnown RBP32.45■■■□□ 2.78
SSBP3-202ENST00000357475 RTCBQ9Y3I0 505 aaKnown RBP32.44■■■□□ 2.78
SSBP3-202ENST00000357475 TBC1D2BQ9UPU7 963 aa32.43■■■□□ 2.78
SSBP3-202ENST00000357475 ARFGEF2Q9Y6D5 1785 aa32.42■■■□□ 2.78
SSBP3-202ENST00000357475 KIF16BQ96L93 1317 aa32.42■■■□□ 2.78
SSBP3-202ENST00000357475 FKBP5Q13451 457 aaPredicted RBP32.41■■■□□ 2.78
SSBP3-202ENST00000357475 ARXQ96QS3 562 aa32.41■■■□□ 2.78
SSBP3-202ENST00000357475 TFCP2L1Q9NZI6 479 aa32.41■■■□□ 2.78
SSBP3-202ENST00000357475 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.41■■■□□ 2.78
SSBP3-202ENST00000357475 ADCY9O60503 1353 aa32.41■■■□□ 2.78
SSBP3-202ENST00000357475 BCORQ6W2J9 1755 aa32.4■■■□□ 2.78
SSBP3-202ENST00000357475 F6X3S4 739 aa32.4■■■□□ 2.78
SSBP3-202ENST00000357475 SLC15A2Q16348 729 aa32.4■■■□□ 2.78
SSBP3-202ENST00000357475 ARHGEF1Q92888 912 aaKnown RBP32.4■■■□□ 2.78
SSBP3-202ENST00000357475 DZIP3Q86Y13 1208 aaKnown RBP32.39■■■□□ 2.78
SSBP3-202ENST00000357475 ZBTB3Q9H5J0 574 aa32.39■■■□□ 2.78
SSBP3-202ENST00000357475 QSER1Q2KHR3 1735 aa32.38■■■□□ 2.77
SSBP3-202ENST00000357475 RRP1P56182 461 aaKnown RBP32.38■■■□□ 2.77
SSBP3-202ENST00000357475 STK32BQ9NY57 414 aa32.38■■■□□ 2.77
SSBP3-202ENST00000357475 SCN7AQ01118 1682 aa32.37■■■□□ 2.77
SSBP3-202ENST00000357475 PTPRCP08575 1304 aa32.37■■■□□ 2.77
SSBP3-202ENST00000357475 TRIM27P14373 513 aa32.37■■■□□ 2.77
SSBP3-202ENST00000357475 RNF123Q5XPI4 1314 aa32.37■■■□□ 2.77
SSBP3-202ENST00000357475 NUP98P52948 1817 aa32.37■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms