RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 CHMP4AQ9BY43 222 aa23.12■■□□□ 1.29
SMARCD3-202ENST00000356800 API5Q9BZZ5 524 aaKnown RBP23.12■■□□□ 1.29
SMARCD3-202ENST00000356800 BRWD3Q6RI45 1802 aa23.12■■□□□ 1.29
SMARCD3-202ENST00000356800 MVPQ14764 893 aaKnown RBP23.11■■□□□ 1.29
SMARCD3-202ENST00000356800 ZNF772Q68DY9 489 aaPredicted RBP23.11■■□□□ 1.29
SMARCD3-202ENST00000356800 ANXA1P04083 346 aa23.1■■□□□ 1.29
SMARCD3-202ENST00000356800 FLIIQ13045 1269 aa23.1■■□□□ 1.29
SMARCD3-202ENST00000356800 PROSER3Q2NL68 480 aa23.1■■□□□ 1.29
SMARCD3-202ENST00000356800 PHAXQ9H814 394 aaKnown RBP23.1■■□□□ 1.29
SMARCD3-202ENST00000356800 PDIA6Q15084 440 aa23.09■■□□□ 1.29
SMARCD3-202ENST00000356800 B4GALNT3Q6L9W6 998 aa23.09■■□□□ 1.29
SMARCD3-202ENST00000356800 DBF4Q9UBU7 674 aaPredicted RBP23.09■■□□□ 1.29
SMARCD3-202ENST00000356800 SBF2Q86WG5 1849 aa23.09■■□□□ 1.29
SMARCD3-202ENST00000356800 KCNQ2O43526 872 aa23.09■■□□□ 1.29
SMARCD3-202ENST00000356800 FAM182BQ5T319 152 aa23.08■■□□□ 1.29
SMARCD3-202ENST00000356800 ITPRIPQ8IWB1 547 aa23.07■■□□□ 1.28
SMARCD3-202ENST00000356800 CCDC136Q96JN2 1154 aa23.07■■□□□ 1.28
SMARCD3-202ENST00000356800 NHSQ6T4R5 1651 aa23.07■■□□□ 1.28
SMARCD3-202ENST00000356800 DDX21Q9NR30 783 aaKnown RBP eCLIP23.06■■□□□ 1.28
SMARCD3-202ENST00000356800 SLC4A9Q96Q91 983 aa23.06■■□□□ 1.28
SMARCD3-202ENST00000356800 N4BP2Q86UW6 1770 aaPredicted RBP23.05■■□□□ 1.28
SMARCD3-202ENST00000356800 TJP1Q07157 1748 aa23.05■■□□□ 1.28
SMARCD3-202ENST00000356800 F6X3S4 739 aa23.05■■□□□ 1.28
SMARCD3-202ENST00000356800 RBM6P78332 1123 aaKnown RBP23.05■■□□□ 1.28
SMARCD3-202ENST00000356800 FKBP5Q13451 457 aaPredicted RBP23.05■■□□□ 1.28
SMARCD3-202ENST00000356800 VSIG10Q8N0Z9 540 aa23.05■■□□□ 1.28
SMARCD3-202ENST00000356800 BTAF1O14981 1849 aa23.04■■□□□ 1.28
SMARCD3-202ENST00000356800 AAMPQ13685 434 aa23.04■■□□□ 1.28
SMARCD3-202ENST00000356800 RBM42Q9BTD8 480 aaKnown RBP23.04■■□□□ 1.28
SMARCD3-202ENST00000356800 INTS3Q68E01 1043 aaKnown RBP23.03■■□□□ 1.28
SMARCD3-202ENST00000356800 PTF1AQ7RTS3 328 aa23.03■■□□□ 1.28
SMARCD3-202ENST00000356800 LRP10Q7Z4F1 713 aa23.03■■□□□ 1.28
SMARCD3-202ENST00000356800 HYPKQ9NX55 129 aa23.03■■□□□ 1.28
SMARCD3-202ENST00000356800 RGS17Q9UGC6 210 aaPredicted RBP23.03■■□□□ 1.28
SMARCD3-202ENST00000356800 DDX19BQ9UMR2 479 aa23.03■■□□□ 1.28
SMARCD3-202ENST00000356800 PIP4K2AP48426 406 aaPredicted RBP23.02■■□□□ 1.28
SMARCD3-202ENST00000356800 DNAJC10Q8IXB1 793 aa23.02■■□□□ 1.28
SMARCD3-202ENST00000356800 NBPF26B4DH59 902 aa23.01■■□□□ 1.27
SMARCD3-202ENST00000356800 MYL6BP14649 208 aa23.01■■□□□ 1.27
SMARCD3-202ENST00000356800 NBPF14Q5TI25 921 aa23.01■■□□□ 1.27
SMARCD3-202ENST00000356800 NBPF10Q6P3W6 841 aaKnown RBP23.01■■□□□ 1.27
SMARCD3-202ENST00000356800 NBPF15Q8N660 670 aa23.01■■□□□ 1.27
SMARCD3-202ENST00000356800 CICQ96RK0 1608 aaPredicted RBP23■■□□□ 1.27
SMARCD3-202ENST00000356800 ERBB4Q15303 1308 aa23■■□□□ 1.27
SMARCD3-202ENST00000356800 ADCY9O60503 1353 aa23■■□□□ 1.27
SMARCD3-202ENST00000356800 A1BGP04217 495 aa23■■□□□ 1.27
SMARCD3-202ENST00000356800 PELP1Q8IZL8 1130 aaKnown RBP23■■□□□ 1.27
SMARCD3-202ENST00000356800 PXDNLA1KZ92 1463 aa22.99■■□□□ 1.27
SMARCD3-202ENST00000356800 PALLDQ8WX93 1383 aa22.99■■□□□ 1.27
SMARCD3-202ENST00000356800 ZBTB7BO15156 539 aaPredicted RBP22.99■■□□□ 1.27
SMARCD3-202ENST00000356800 TEX13AQ9BXU3 409 aaPredicted RBP22.99■■□□□ 1.27
SMARCD3-202ENST00000356800 ZBTB40Q9NUA8 1239 aa22.99■■□□□ 1.27
SMARCD3-202ENST00000356800 SLC4A10Q6U841 1118 aa22.98■■□□□ 1.27
SMARCD3-202ENST00000356800 KRT27Q7Z3Y8 459 aa22.98■■□□□ 1.27
SMARCD3-202ENST00000356800 PI4KAP2A4QPH2 592 aa22.97■■□□□ 1.27
SMARCD3-202ENST00000356800 PI4KAP1Q8N8J0 262 aa22.97■■□□□ 1.27
SMARCD3-202ENST00000356800 ZNF831Q5JPB2 1677 aa22.97■■□□□ 1.27
SMARCD3-202ENST00000356800 XAGE3Q8WTP9 111 aa22.97■■□□□ 1.27
SMARCD3-202ENST00000356800 SMARCC1Q92922 1105 aaPredicted RBP22.97■■□□□ 1.27
SMARCD3-202ENST00000356800 LOC102724428A0A0B4J2F2 783 aa22.96■■□□□ 1.27
SMARCD3-202ENST00000356800 CYP19A1P11511 503 aaPredicted RBP22.96■■□□□ 1.27
SMARCD3-202ENST00000356800 RXRBP28702 533 aa22.96■■□□□ 1.27
SMARCD3-202ENST00000356800 CCT4P50991 539 aaKnown RBP22.96■■□□□ 1.27
SMARCD3-202ENST00000356800 SIK1P57059 783 aa22.96■■□□□ 1.27
SMARCD3-202ENST00000356800 AIMP1Q12904 312 aaKnown RBP22.96■■□□□ 1.27
SMARCD3-202ENST00000356800 POTEAQ6S8J7 498 aa22.96■■□□□ 1.27
SMARCD3-202ENST00000356800 COPS6Q7L5N1 327 aa22.96■■□□□ 1.27
SMARCD3-202ENST00000356800 PCDHB15Q9Y5E8 787 aa22.96■■□□□ 1.27
SMARCD3-202ENST00000356800 DNAAF4Q8WXU2 420 aa22.95■■□□□ 1.26
SMARCD3-202ENST00000356800 STARD3NLO95772 234 aa22.94■■□□□ 1.26
SMARCD3-202ENST00000356800 KSR2Q6VAB6 950 aa22.94■■□□□ 1.26
SMARCD3-202ENST00000356800 COL5A3P25940 1745 aaPredicted RBP22.94■■□□□ 1.26
SMARCD3-202ENST00000356800 MAP3K2Q9Y2U5 619 aa22.93■■□□□ 1.26
SMARCD3-202ENST00000356800 ARFGEF2Q9Y6D5 1785 aa22.93■■□□□ 1.26
SMARCD3-202ENST00000356800 EP400Q96L91 3159 aa22.93■■□□□ 1.26
SMARCD3-202ENST00000356800 ITPK1Q13572 414 aa22.93■■□□□ 1.26
SMARCD3-202ENST00000356800 LY75O60449 1722 aa22.93■■□□□ 1.26
SMARCD3-202ENST00000356800 RREB1Q92766 1687 aa22.92■■□□□ 1.26
SMARCD3-202ENST00000356800 NUP188Q5SRE5 1749 aa22.92■■□□□ 1.26
SMARCD3-202ENST00000356800 ATP6V1AP38606 617 aa22.92■■□□□ 1.26
SMARCD3-202ENST00000356800 FAM196AQ6ZSG2 479 aa22.92■■□□□ 1.26
SMARCD3-202ENST00000356800 MYH14Q7Z406 1995 aaKnown RBP22.91■■□□□ 1.26
SMARCD3-202ENST00000356800 DDX58O95786 925 aaKnown RBP22.91■■□□□ 1.26
SMARCD3-202ENST00000356800 BEND3Q5T5X7 828 aa22.91■■□□□ 1.26
SMARCD3-202ENST00000356800 ATP10DQ9P241 1426 aa22.91■■□□□ 1.26
SMARCD3-202ENST00000356800 KDM2BQ8NHM5 1336 aa22.9■■□□□ 1.26
SMARCD3-202ENST00000356800 MEIS3Q99687 375 aa22.9■■□□□ 1.26
SMARCD3-202ENST00000356800 CHMP4BQ9H444 224 aaKnown RBP22.9■■□□□ 1.26
SMARCD3-202ENST00000356800 BCL11BQ9C0K0 894 aaPredicted RBP22.9■■□□□ 1.26
SMARCD3-202ENST00000356800 IGHDP01880 384 aa22.89■■□□□ 1.25
SMARCD3-202ENST00000356800 TTLL7Q6ZT98 887 aa22.89■■□□□ 1.25
SMARCD3-202ENST00000356800 C1orf115Q9H7X2 142 aa22.89■■□□□ 1.25
SMARCD3-202ENST00000356800 ANKRD13DQ6ZTN6 518 aa22.88■■□□□ 1.25
SMARCD3-202ENST00000356800 RIC3Q7Z5B4 369 aa22.88■■□□□ 1.25
SMARCD3-202ENST00000356800 SRCIN1Q9C0H9 1055 aa22.88■■□□□ 1.25
SMARCD3-202ENST00000356800 ZBTB1Q9Y2K1 713 aa22.88■■□□□ 1.25
SMARCD3-202ENST00000356800 INTS5Q6P9B9 1019 aaKnown RBP22.87■■□□□ 1.25
SMARCD3-202ENST00000356800 CENPQQ7L2Z9 268 aaPredicted RBP22.87■■□□□ 1.25
SMARCD3-202ENST00000356800 TAF1LQ8IZX4 1826 aa22.86■■□□□ 1.25
SMARCD3-202ENST00000356800 KCNQ4P56696 695 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms