RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 AATKQ6ZMQ8 1374 aa12.19□□□□□ -0.46
PTPRA-203ENST00000356147 KIAA0232Q92628 1395 aa12.19□□□□□ -0.46
PTPRA-203ENST00000356147 PLEKHG5O94827 1062 aa12.19□□□□□ -0.46
PTPRA-203ENST00000356147 CASTP20810 708 aaKnown RBP12.19□□□□□ -0.46
PTPRA-203ENST00000356147 HSPA4P34932 840 aa12.19□□□□□ -0.46
PTPRA-203ENST00000356147 TCEANC2Q96MN5 208 aa12.19□□□□□ -0.46
PTPRA-203ENST00000356147 UBTFL1P0CB47 393 aaPredicted RBP12.19□□□□□ -0.46
PTPRA-203ENST00000356147 ANAPC15P60006 121 aa12.19□□□□□ -0.46
PTPRA-203ENST00000356147 PPP1R42Q7Z4L9 355 aa12.19□□□□□ -0.46
PTPRA-203ENST00000356147 CCDC94Q9BW85 323 aaPredicted RBP12.19□□□□□ -0.46
PTPRA-203ENST00000356147 USP44Q9H0E7 712 aa12.19□□□□□ -0.46
PTPRA-203ENST00000356147 ACEP12821 1306 aa12.19□□□□□ -0.46
PTPRA-203ENST00000356147 CRB1P82279 1406 aa12.19□□□□□ -0.46
PTPRA-203ENST00000356147 KDM4AO75164 1064 aa12.18□□□□□ -0.46
PTPRA-203ENST00000356147 ADCK5Q3MIX3 580 aa12.18□□□□□ -0.46
PTPRA-203ENST00000356147 BCL2L12Q9HB09 334 aa12.18□□□□□ -0.46
PTPRA-203ENST00000356147 TTC21BQ7Z4L5 1316 aa12.18□□□□□ -0.46
PTPRA-203ENST00000356147 DIP2CQ9Y2E4 1556 aa12.18□□□□□ -0.46
PTPRA-203ENST00000356147 GNAI3P08754 354 aa12.18□□□□□ -0.46
PTPRA-203ENST00000356147 KCNF1Q9H3M0 494 aa12.18□□□□□ -0.46
PTPRA-203ENST00000356147 F13A1P00488 732 aa12.17□□□□□ -0.46
PTPRA-203ENST00000356147 GJB2P29033 226 aa12.17□□□□□ -0.46
PTPRA-203ENST00000356147 KIF3AQ9Y496 699 aa12.17□□□□□ -0.46
PTPRA-203ENST00000356147 SRGAP3O43295 1099 aa12.17□□□□□ -0.46
PTPRA-203ENST00000356147 UBE2HP62256 183 aa12.17□□□□□ -0.46
PTPRA-203ENST00000356147 PLPPR3Q6T4P5 718 aa12.17□□□□□ -0.46
PTPRA-203ENST00000356147 CKAP2LQ8IYA6 745 aa12.17□□□□□ -0.46
PTPRA-203ENST00000356147 RIOK3O14730 519 aaKnown RBP12.16□□□□□ -0.46
PTPRA-203ENST00000356147 NBPF7P0C2Y1 421 aaPredicted RBP12.16□□□□□ -0.46
PTPRA-203ENST00000356147 PTH1RQ03431 593 aa12.16□□□□□ -0.46
PTPRA-203ENST00000356147 PRPF40BQ6NWY9 871 aaKnown RBP12.16□□□□□ -0.46
PTPRA-203ENST00000356147 JAKMIP1Q96N16 626 aaKnown RBP12.16□□□□□ -0.46
PTPRA-203ENST00000356147 SOS1Q07889 1333 aaPredicted RBP12.16□□□□□ -0.46
PTPRA-203ENST00000356147 RIMS1Q86UR5 1692 aaKnown RBP12.16□□□□□ -0.46
PTPRA-203ENST00000356147 SGSM2O43147 1006 aa12.16□□□□□ -0.46
PTPRA-203ENST00000356147 U2AF2P26368 475 aaKnown RBP eCLIP12.16□□□□□ -0.462e-8■■■■□ 19.6
PTPRA-203ENST00000356147 OS9Q13438 667 aaPredicted RBP12.16□□□□□ -0.46
PTPRA-203ENST00000356147 USHBP1Q8N6Y0 703 aa12.16□□□□□ -0.46
PTPRA-203ENST00000356147 FAM184AQ8NB25 1140 aa12.16□□□□□ -0.46
PTPRA-203ENST00000356147 EYA1Q99502 592 aa12.16□□□□□ -0.46
PTPRA-203ENST00000356147 LIMCH1Q9UPQ0 1083 aa12.16□□□□□ -0.46
PTPRA-203ENST00000356147 PTGS1P23219 599 aa12.15□□□□□ -0.46
PTPRA-203ENST00000356147 AMPHP49418 695 aa12.15□□□□□ -0.46
PTPRA-203ENST00000356147 LRMPQ12912 555 aa12.15□□□□□ -0.46
PTPRA-203ENST00000356147 LUZP1Q86V48 1076 aa12.15□□□□□ -0.46
PTPRA-203ENST00000356147 SMAP1Q8IYB5 467 aaPredicted RBP12.15□□□□□ -0.46
PTPRA-203ENST00000356147 PI4K2BQ8TCG2 481 aa12.15□□□□□ -0.46
PTPRA-203ENST00000356147 RHPN1Q8TCX5 695 aa12.15□□□□□ -0.46
PTPRA-203ENST00000356147 PREX1Q8TCU6 1659 aa12.15□□□□□ -0.46
PTPRA-203ENST00000356147 RAD50Q92878 1312 aa12.15□□□□□ -0.46
PTPRA-203ENST00000356147 ZSCAN20P17040 1043 aaPredicted RBP12.15□□□□□ -0.46
PTPRA-203ENST00000356147 CCDC30Q5VVM6 783 aa12.15□□□□□ -0.46
PTPRA-203ENST00000356147 MTERF4Q7Z6M4 381 aaKnown RBP12.15□□□□□ -0.46
PTPRA-203ENST00000356147 TTC14Q96N46 770 aa12.15□□□□□ -0.46
PTPRA-203ENST00000356147 LSG1Q9H089 658 aaKnown RBP12.15□□□□□ -0.46
PTPRA-203ENST00000356147 TFIP11Q9UBB9 837 aaKnown RBP12.15□□□□□ -0.46
PTPRA-203ENST00000356147 STAP2Q9UGK3 403 aa12.15□□□□□ -0.46
PTPRA-203ENST00000356147 NAA30Q147X3 362 aaPredicted RBP12.15□□□□□ -0.47
PTPRA-203ENST00000356147 UVSSAQ2YD98 709 aa12.14□□□□□ -0.47
PTPRA-203ENST00000356147 NRBP1Q9UHY1 535 aa12.14□□□□□ -0.47
PTPRA-203ENST00000356147 LIG1P18858 919 aa12.14□□□□□ -0.47
PTPRA-203ENST00000356147 PRIMPOLQ96LW4 560 aa12.14□□□□□ -0.47
PTPRA-203ENST00000356147 MTMR6Q9Y217 621 aa12.14□□□□□ -0.47
PTPRA-203ENST00000356147 A0A0U1RQG5 324 aaPredicted RBP12.13□□□□□ -0.47
PTPRA-203ENST00000356147 HDGFL1Q5TGJ6 251 aa12.13□□□□□ -0.47
PTPRA-203ENST00000356147 DRC7Q8IY82 874 aa12.13□□□□□ -0.47
PTPRA-203ENST00000356147 C16orf45Q96MC5 204 aaPredicted RBP12.13□□□□□ -0.47
PTPRA-203ENST00000356147 HMGN5P82970 282 aaKnown RBP12.13□□□□□ -0.47
PTPRA-203ENST00000356147 KIAA1524Q8TCG1 905 aa12.13□□□□□ -0.47
PTPRA-203ENST00000356147 FUCA2Q9BTY2 467 aa12.13□□□□□ -0.47
PTPRA-203ENST00000356147 DIAPH3Q9NSV4 1193 aa12.13□□□□□ -0.47
PTPRA-203ENST00000356147 PA2G4Q9UQ80 394 aaKnown RBP12.13□□□□□ -0.47
PTPRA-203ENST00000356147 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.13□□□□□ -0.47
PTPRA-203ENST00000356147 KCNJ4P48050 445 aa12.13□□□□□ -0.47
PTPRA-203ENST00000356147 ST3GAL1Q11201 340 aa12.13□□□□□ -0.47
PTPRA-203ENST00000356147 STK3Q13188 491 aa12.13□□□□□ -0.47
PTPRA-203ENST00000356147 PDCL2Q8N4E4 241 aa12.13□□□□□ -0.47
PTPRA-203ENST00000356147 IL17REQ8NFR9 667 aa12.13□□□□□ -0.47
PTPRA-203ENST00000356147 PDRG1Q9NUG6 133 aa12.13□□□□□ -0.47
PTPRA-203ENST00000356147 HYPKQ9NX55 129 aa12.13□□□□□ -0.47
PTPRA-203ENST00000356147 ME3Q16798 604 aa12.12□□□□□ -0.47
PTPRA-203ENST00000356147 TTC6Q86TZ1 520 aa12.12□□□□□ -0.47
PTPRA-203ENST00000356147 TAF7Q15545 349 aaPredicted RBP12.12□□□□□ -0.47
PTPRA-203ENST00000356147 CDC37L1Q7L3B6 337 aa12.12□□□□□ -0.47
PTPRA-203ENST00000356147 CNTROBQ8N137 903 aa12.12□□□□□ -0.47
PTPRA-203ENST00000356147 TMEM87AQ8NBN3 555 aa12.12□□□□□ -0.47
PTPRA-203ENST00000356147 A2ML1A8K2U0 1454 aa12.11□□□□□ -0.47
PTPRA-203ENST00000356147 CCDC186Q7Z3E2 898 aa12.11□□□□□ -0.47
PTPRA-203ENST00000356147 SLC26A8Q96RN1 970 aa12.11□□□□□ -0.47
PTPRA-203ENST00000356147 SPTLC3Q9NUV7 552 aa12.11□□□□□ -0.47
PTPRA-203ENST00000356147 TAF6LQ9Y6J9 622 aa12.11□□□□□ -0.47
PTPRA-203ENST00000356147 A0A087WWV3 80 aa12.11□□□□□ -0.47
PTPRA-203ENST00000356147 PPFIA3O75145 1194 aa12.11□□□□□ -0.47
PTPRA-203ENST00000356147 FOSBP53539 338 aa12.11□□□□□ -0.47
PTPRA-203ENST00000356147 SSH3Q8TE77 659 aa12.11□□□□□ -0.47
PTPRA-203ENST00000356147 LARP1BQ659C4 914 aaKnown RBP12.11□□□□□ -0.47
PTPRA-203ENST00000356147 DLC1Q96QB1 1528 aa12.1□□□□□ -0.47
PTPRA-203ENST00000356147 ROBO2Q9HCK4 1378 aa12.1□□□□□ -0.47
PTPRA-203ENST00000356147 PI4KAP2A4QPH2 592 aa12.1□□□□□ -0.47
PTPRA-203ENST00000356147 KCNQ3O43525 872 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms