RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 SPATA31A5Q5VU36 1347 aa16.83■□□□□ 0.28
UBA3-201ENST00000349511 SPATA31A7Q8IWB4 1347 aa16.83■□□□□ 0.28
UBA3-201ENST00000349511 FAM98CQ17RN3 349 aaKnown RBP16.82■□□□□ 0.28
UBA3-201ENST00000349511 INTS3Q68E01 1043 aaKnown RBP16.82■□□□□ 0.28
UBA3-201ENST00000349511 MYL6BP14649 208 aa16.82■□□□□ 0.28
UBA3-201ENST00000349511 AIMP1Q12904 312 aaKnown RBP16.82■□□□□ 0.28
UBA3-201ENST00000349511 AAMPQ13685 434 aa16.82■□□□□ 0.28
UBA3-201ENST00000349511 DDB1Q16531 1140 aa16.82■□□□□ 0.28
UBA3-201ENST00000349511 MEX3CQ5U5Q3 659 aaKnown RBP16.82■□□□□ 0.28
UBA3-201ENST00000349511 FMNL2Q96PY5 1086 aa16.82■□□□□ 0.28
UBA3-201ENST00000349511 TMOD3Q9NYL9 352 aa16.82■□□□□ 0.28
UBA3-201ENST00000349511 DBF4Q9UBU7 674 aaPredicted RBP16.82■□□□□ 0.28
UBA3-201ENST00000349511 TOGARAM1Q9Y4F4 1720 aa16.81■□□□□ 0.28
UBA3-201ENST00000349511 C5P01031 1676 aa16.81■□□□□ 0.28
UBA3-201ENST00000349511 CACNA1FO60840 1977 aa16.81■□□□□ 0.28
UBA3-201ENST00000349511 PIGBQ92521 554 aa16.81■□□□□ 0.28
UBA3-201ENST00000349511 MEIS3Q99687 375 aa16.81■□□□□ 0.28
UBA3-201ENST00000349511 BCL9LQ86UU0 1499 aa16.8■□□□□ 0.28
UBA3-201ENST00000349511 SPATA31A6Q5VVP1 1343 aa16.8■□□□□ 0.28
UBA3-201ENST00000349511 SNRPA1P09661 255 aaKnown RBP16.8■□□□□ 0.28
UBA3-201ENST00000349511 RWDD1Q9H446 243 aaPredicted RBP16.8■□□□□ 0.28
UBA3-201ENST00000349511 USP21Q9UK80 565 aa16.8■□□□□ 0.28
UBA3-201ENST00000349511 ASAP1Q9ULH1 1129 aa16.8■□□□□ 0.28
UBA3-201ENST00000349511 THRAP3Q9Y2W1 955 aaKnown RBP16.8■□□□□ 0.28
UBA3-201ENST00000349511 NWD2Q9ULI1 1742 aa16.79■□□□□ 0.28
UBA3-201ENST00000349511 PI4KAP2A4QPH2 592 aa16.79■□□□□ 0.28
UBA3-201ENST00000349511 PI4KAP1Q8N8J0 262 aa16.79■□□□□ 0.28
UBA3-201ENST00000349511 PDIA6Q15084 440 aa16.79■□□□□ 0.28
UBA3-201ENST00000349511 ACSBG1Q96GR2 724 aa16.79■□□□□ 0.28
UBA3-201ENST00000349511 WNK3Q9BYP7 1800 aa16.78■□□□□ 0.28
UBA3-201ENST00000349511 FNBP4Q8N3X1 1017 aaPredicted RBP16.78■□□□□ 0.28
UBA3-201ENST00000349511 TNS2Q63HR2 1409 aa16.77■□□□□ 0.28
UBA3-201ENST00000349511 PRIM1P49642 420 aaKnown RBP16.77■□□□□ 0.28
UBA3-201ENST00000349511 MARCH10Q8NA82 808 aaPredicted RBP16.77■□□□□ 0.28
UBA3-201ENST00000349511 CCT4P50991 539 aaKnown RBP16.76■□□□□ 0.27
UBA3-201ENST00000349511 CHMP4AQ9BY43 222 aa16.76■□□□□ 0.27
UBA3-201ENST00000349511 DDX21Q9NR30 783 aaKnown RBP eCLIP16.76■□□□□ 0.27
UBA3-201ENST00000349511 SEC24BO95487 1268 aa16.76■□□□□ 0.27
UBA3-201ENST00000349511 VPS72Q15906 364 aa16.76■□□□□ 0.27
UBA3-201ENST00000349511 SIRT2Q8IXJ6 389 aa16.76■□□□□ 0.27
UBA3-201ENST00000349511 RBM42Q9BTD8 480 aaKnown RBP16.76■□□□□ 0.27
UBA3-201ENST00000349511 CDCA7Q9BWT1 371 aaPredicted RBP16.76■□□□□ 0.27
UBA3-201ENST00000349511 CHMP4BQ9H444 224 aaKnown RBP16.76■□□□□ 0.27
UBA3-201ENST00000349511 ITGB4P16144 1822 aa16.75■□□□□ 0.27
UBA3-201ENST00000349511 BARGINQ6ZT62 677 aa16.75■□□□□ 0.27
UBA3-201ENST00000349511 HYPKQ9NX55 129 aa16.75■□□□□ 0.27
UBA3-201ENST00000349511 HDAC1Q13547 482 aaPredicted RBP16.75■□□□□ 0.27
UBA3-201ENST00000349511 GSE1Q14687 1217 aa16.75■□□□□ 0.27
UBA3-201ENST00000349511 DNAAF4Q8WXU2 420 aa16.75■□□□□ 0.27
UBA3-201ENST00000349511 ATG3Q9NT62 314 aa16.75■□□□□ 0.27
UBA3-201ENST00000349511 MAP3K2Q9Y2U5 619 aa16.75■□□□□ 0.27
UBA3-201ENST00000349511 ADCY9O60503 1353 aa16.74■□□□□ 0.27
UBA3-201ENST00000349511 COPS6Q7L5N1 327 aa16.74■□□□□ 0.27
UBA3-201ENST00000349511 PDZRN3Q9UPQ7 1066 aa16.74■□□□□ 0.27
UBA3-201ENST00000349511 A1BGP04217 495 aa16.73■□□□□ 0.27
UBA3-201ENST00000349511 XAGE3Q8WTP9 111 aa16.73■□□□□ 0.27
UBA3-201ENST00000349511 AFF2P51816 1311 aa16.73■□□□□ 0.27
UBA3-201ENST00000349511 KCPQ6ZWJ8 1503 aa16.73■□□□□ 0.27
UBA3-201ENST00000349511 FAM182BQ5T319 152 aa16.73■□□□□ 0.27
UBA3-201ENST00000349511 GLI3P10071 1580 aa16.72■□□□□ 0.27
UBA3-201ENST00000349511 SRCIN1Q9C0H9 1055 aa16.72■□□□□ 0.27
UBA3-201ENST00000349511 BEND3Q5T5X7 828 aa16.72■□□□□ 0.27
UBA3-201ENST00000349511 KSR2Q6VAB6 950 aa16.72■□□□□ 0.27
UBA3-201ENST00000349511 IL27Q8NEV9 243 aa16.72■□□□□ 0.27
UBA3-201ENST00000349511 UBR2Q8IWV8 1755 aa16.71■□□□□ 0.27
UBA3-201ENST00000349511 EP400Q96L91 3159 aa16.71■□□□□ 0.27
UBA3-201ENST00000349511 BCL9O00512 1426 aa16.71■□□□□ 0.27
UBA3-201ENST00000349511 NBPF26B4DH59 902 aa16.71■□□□□ 0.27
UBA3-201ENST00000349511 CWF19L2Q2TBE0 894 aaKnown RBP16.71■□□□□ 0.27
UBA3-201ENST00000349511 NBPF14Q5TI25 921 aa16.71■□□□□ 0.27
UBA3-201ENST00000349511 NBPF10Q6P3W6 841 aaKnown RBP16.71■□□□□ 0.27
UBA3-201ENST00000349511 RIC3Q7Z5B4 369 aa16.71■□□□□ 0.27
UBA3-201ENST00000349511 NBPF15Q8N660 670 aa16.71■□□□□ 0.27
UBA3-201ENST00000349511 USP44Q9H0E7 712 aa16.71■□□□□ 0.27
UBA3-201ENST00000349511 ZNF330Q9Y3S2 320 aaPredicted RBP16.71■□□□□ 0.27
UBA3-201ENST00000349511 DOT1LQ8TEK3 1739 aa16.71■□□□□ 0.26
UBA3-201ENST00000349511 KCNQ2O43526 872 aa16.7■□□□□ 0.26
UBA3-201ENST00000349511 LRP10Q7Z4F1 713 aa16.7■□□□□ 0.26
UBA3-201ENST00000349511 DNAJC10Q8IXB1 793 aa16.7■□□□□ 0.26
UBA3-201ENST00000349511 PAPPAQ13219 1627 aa16.7■□□□□ 0.26
UBA3-201ENST00000349511 FRAT2O75474 233 aaPredicted RBP16.7■□□□□ 0.26
UBA3-201ENST00000349511 CEP85Q6P2H3 762 aa16.7■□□□□ 0.26
UBA3-201ENST00000349511 SLC4A9Q96Q91 983 aa16.69■□□□□ 0.26
UBA3-201ENST00000349511 DDX58O95786 925 aaKnown RBP16.69■□□□□ 0.26
UBA3-201ENST00000349511 GNAI2P04899 355 aa16.69■□□□□ 0.26
UBA3-201ENST00000349511 NBPF7P0C2Y1 421 aaPredicted RBP16.69■□□□□ 0.26
UBA3-201ENST00000349511 LRRFIP2Q9Y608 721 aaKnown RBP16.69■□□□□ 0.26
UBA3-201ENST00000349511 ATP10DQ9P241 1426 aa16.69■□□□□ 0.26
UBA3-201ENST00000349511 SMC5Q8IY18 1101 aa16.68■□□□□ 0.26
UBA3-201ENST00000349511 GJD4Q96KN9 370 aaPredicted RBP16.68■□□□□ 0.26
UBA3-201ENST00000349511 APBB1O00213 710 aa16.67■□□□□ 0.26
UBA3-201ENST00000349511 UBTFL1P0CB47 393 aaPredicted RBP16.67■□□□□ 0.26
UBA3-201ENST00000349511 ANKRD13DQ6ZTN6 518 aa16.67■□□□□ 0.26
UBA3-201ENST00000349511 ANKRD44Q8N8A2 993 aa16.67■□□□□ 0.26
UBA3-201ENST00000349511 GNAI3P08754 354 aa16.67■□□□□ 0.26
UBA3-201ENST00000349511 ANKRD45Q5TZF3 282 aa16.67■□□□□ 0.26
UBA3-201ENST00000349511 TTLL7Q6ZT98 887 aa16.67■□□□□ 0.26
UBA3-201ENST00000349511 LNPKQ9C0E8 428 aa16.67■□□□□ 0.26
UBA3-201ENST00000349511 LAMB4A4D0S4 1761 aa16.67■□□□□ 0.26
UBA3-201ENST00000349511 PXDNLA1KZ92 1463 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms