RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 CATIPQ7Z7H3 387 aa26.82■■□□□ 1.88
NPAS3-201ENST00000346562 MPRIPQ6WCQ1 1025 aa26.82■■□□□ 1.88
NPAS3-201ENST00000346562 SPDYE4A6NLX3 237 aa26.81■■□□□ 1.88
NPAS3-201ENST00000346562 PPM1FP49593 454 aaPredicted RBP26.81■■□□□ 1.88
NPAS3-201ENST00000346562 SCAND2PQ9GZW5 306 aaPredicted RBP26.81■■□□□ 1.88
NPAS3-201ENST00000346562 CAMK4Q16566 473 aa26.81■■□□□ 1.88
NPAS3-201ENST00000346562 NLRP5P59047 1200 aa26.81■■□□□ 1.88
NPAS3-201ENST00000346562 SLFN5Q08AF3 891 aa26.8■■□□□ 1.88
NPAS3-201ENST00000346562 GOLGA8AA7E2F4 631 aa26.8■■□□□ 1.88
NPAS3-201ENST00000346562 GOLGA8BA8MQT2 603 aa26.8■■□□□ 1.88
NPAS3-201ENST00000346562 TTF1Q15361 905 aaPredicted RBP26.8■■□□□ 1.88
NPAS3-201ENST00000346562 MCM3P25205 808 aa26.79■■□□□ 1.88
NPAS3-201ENST00000346562 KIF5CO60282 957 aa26.79■■□□□ 1.88
NPAS3-201ENST00000346562 RBM10P98175 930 aaKnown RBP26.79■■□□□ 1.88
NPAS3-201ENST00000346562 TEX13AQ9BXU3 409 aaPredicted RBP26.79■■□□□ 1.88
NPAS3-201ENST00000346562 SFPQP23246 707 aaKnown RBP eCLIP26.79■■□□□ 1.88
NPAS3-201ENST00000346562 TAF3Q5VWG9 929 aa26.79■■□□□ 1.88
NPAS3-201ENST00000346562 DYDC1Q8WWB3 177 aa26.79■■□□□ 1.88
NPAS3-201ENST00000346562 FERMT2Q96AC1 680 aa26.79■■□□□ 1.88
NPAS3-201ENST00000346562 MPNDQ8N594 471 aa26.79■■□□□ 1.88
NPAS3-201ENST00000346562 CRACR2AQ9BSW2 395 aa26.78■■□□□ 1.88
NPAS3-201ENST00000346562 CETN1Q12798 172 aa26.78■■□□□ 1.88
NPAS3-201ENST00000346562 CCDC178Q5BJE1 867 aa26.78■■□□□ 1.88
NPAS3-201ENST00000346562 DNAAF4Q8WXU2 420 aa26.78■■□□□ 1.88
NPAS3-201ENST00000346562 ARAP1Q96P48 1450 aa26.78■■□□□ 1.88
NPAS3-201ENST00000346562 ADAMTS2O95450 1211 aa26.78■■□□□ 1.88
NPAS3-201ENST00000346562 MPHOSPH6Q99547 160 aaKnown RBP26.78■■□□□ 1.88
NPAS3-201ENST00000346562 STAMBPO95630 424 aa26.78■■□□□ 1.88
NPAS3-201ENST00000346562 LDHCP07864 332 aa26.78■■□□□ 1.88
NPAS3-201ENST00000346562 USP8P40818 1118 aa26.78■■□□□ 1.88
NPAS3-201ENST00000346562 CASQ1P31415 396 aa26.77■■□□□ 1.88
NPAS3-201ENST00000346562 KLHL10Q6JEL2 608 aa26.77■■□□□ 1.88
NPAS3-201ENST00000346562 UBXN4Q92575 508 aa26.77■■□□□ 1.88
NPAS3-201ENST00000346562 MAP2K1Q02750 393 aaPredicted RBP26.77■■□□□ 1.88
NPAS3-201ENST00000346562 MAP9Q49MG5 647 aa26.77■■□□□ 1.88
NPAS3-201ENST00000346562 PHF8Q9UPP1 1060 aa26.77■■□□□ 1.88
NPAS3-201ENST00000346562 UQCRHLA0A096LP55 91 aa26.77■■□□□ 1.88
NPAS3-201ENST00000346562 EXOC5O00471 708 aa26.77■■□□□ 1.88
NPAS3-201ENST00000346562 UQCRHP07919 91 aa26.77■■□□□ 1.88
NPAS3-201ENST00000346562 USHBP1Q8N6Y0 703 aa26.77■■□□□ 1.88
NPAS3-201ENST00000346562 IFIT3O14879 490 aaKnown RBP26.77■■□□□ 1.88
NPAS3-201ENST00000346562 STXBP4Q6ZWJ1 553 aa26.76■■□□□ 1.87
NPAS3-201ENST00000346562 USO1O60763 962 aaKnown RBP26.76■■□□□ 1.87
NPAS3-201ENST00000346562 CDC5LQ99459 802 aaKnown RBP26.76■■□□□ 1.87
NPAS3-201ENST00000346562 AMPD3Q01432 767 aa26.76■■□□□ 1.87
NPAS3-201ENST00000346562 KIF5BP33176 963 aa26.75■■□□□ 1.87
NPAS3-201ENST00000346562 CALML4Q96GE6 196 aa26.75■■□□□ 1.87
NPAS3-201ENST00000346562 CABP5Q9NP86 173 aa26.75■■□□□ 1.87
NPAS3-201ENST00000346562 CTAGE5O15320 804 aa26.75■■□□□ 1.87
NPAS3-201ENST00000346562 SMARCA5O60264 1052 aaPredicted RBP26.75■■□□□ 1.87
NPAS3-201ENST00000346562 CCDC183Q5T5S1 534 aa26.75■■□□□ 1.87
NPAS3-201ENST00000346562 FEZ1Q99689 392 aa26.75■■□□□ 1.87
NPAS3-201ENST00000346562 FERMT3Q86UX7 667 aa26.75■■□□□ 1.87
NPAS3-201ENST00000346562 LUZP1Q86V48 1076 aa26.75■■□□□ 1.87
NPAS3-201ENST00000346562 DRC1Q96MC2 740 aa26.75■■□□□ 1.87
NPAS3-201ENST00000346562 DBF4Q9UBU7 674 aaPredicted RBP26.75■■□□□ 1.87
NPAS3-201ENST00000346562 MYCNP04198 464 aaPredicted RBP26.75■■□□□ 1.87
NPAS3-201ENST00000346562 TOP1P11387 765 aaKnown RBP26.75■■□□□ 1.87
NPAS3-201ENST00000346562 SPTY2D1Q68D10 685 aaPredicted RBP26.75■■□□□ 1.87
NPAS3-201ENST00000346562 HOOK3Q86VS8 718 aa26.74■■□□□ 1.87
NPAS3-201ENST00000346562 GSTTP1A0A1W2PQM5 241 aa26.74■■□□□ 1.87
NPAS3-201ENST00000346562 C6orf229H3BNL8 230 aa26.74■■□□□ 1.87
NPAS3-201ENST00000346562 TTC21AQ8NDW8 1320 aa26.74■■□□□ 1.87
NPAS3-201ENST00000346562 GCOM1H8Y6P7 765 aaPredicted RBP26.74■■□□□ 1.87
NPAS3-201ENST00000346562 MYZAPP0CAP1 466 aa26.74■■□□□ 1.87
NPAS3-201ENST00000346562 YEATS4O95619 227 aa26.74■■□□□ 1.87
NPAS3-201ENST00000346562 BAG3O95817 575 aa26.74■■□□□ 1.87
NPAS3-201ENST00000346562 HLA-DOAP06340 250 aa26.74■■□□□ 1.87
NPAS3-201ENST00000346562 WAPLQ7Z5K2 1190 aa26.74■■□□□ 1.87
NPAS3-201ENST00000346562 MCM4P33991 863 aa26.73■■□□□ 1.87
NPAS3-201ENST00000346562 CTNNBL1Q8WYA6 563 aaPredicted RBP26.73■■□□□ 1.87
NPAS3-201ENST00000346562 NGLY1Q96IV0 654 aa26.73■■□□□ 1.87
NPAS3-201ENST00000346562 PYM1Q9BRP8 204 aaKnown RBP26.73■■□□□ 1.87
NPAS3-201ENST00000346562 CCDC113Q9H0I3 377 aa26.73■■□□□ 1.87
NPAS3-201ENST00000346562 SYCE3A1L190 88 aa26.73■■□□□ 1.87
NPAS3-201ENST00000346562 PDE4BQ07343 736 aa26.73■■□□□ 1.87
NPAS3-201ENST00000346562 CCDC8Q9H0W5 538 aaPredicted RBP26.73■■□□□ 1.87
NPAS3-201ENST00000346562 FAM135AQ9P2D6 1515 aa26.72■■□□□ 1.87
NPAS3-201ENST00000346562 NUP88Q99567 741 aaPredicted RBP26.72■■□□□ 1.87
NPAS3-201ENST00000346562 DDX46Q7L014 1031 aaKnown RBP26.72■■□□□ 1.87
NPAS3-201ENST00000346562 ZNF219Q9P2Y4 722 aaPredicted RBP26.72■■□□□ 1.87
NPAS3-201ENST00000346562 LIG1P18858 919 aa26.72■■□□□ 1.87
NPAS3-201ENST00000346562 PPP1R42Q7Z4L9 355 aa26.71■■□□□ 1.87
NPAS3-201ENST00000346562 CNNM3Q8NE01 707 aa26.71■■□□□ 1.87
NPAS3-201ENST00000346562 PTPRCP08575 1304 aa26.71■■□□□ 1.87
NPAS3-201ENST00000346562 CTNNA2P26232 953 aa26.71■■□□□ 1.87
NPAS3-201ENST00000346562 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.71■■□□□ 1.87
NPAS3-201ENST00000346562 GOLGA6L10A0A0M3HER8 536 aa26.71■■□□□ 1.87
NPAS3-201ENST00000346562 EVI5LQ96CN4 794 aa26.71■■□□□ 1.87
NPAS3-201ENST00000346562 THUMPD2Q9BTF0 503 aaKnown RBP26.71■■□□□ 1.87
NPAS3-201ENST00000346562 SHTN1A0MZ66 631 aa26.71■■□□□ 1.87
NPAS3-201ENST00000346562 TMCO3Q6UWJ1 677 aa26.71■■□□□ 1.87
NPAS3-201ENST00000346562 KAT14Q9H8E8 782 aa26.71■■□□□ 1.87
NPAS3-201ENST00000346562 IFFO1Q0D2I5 559 aa26.7■■□□□ 1.87
NPAS3-201ENST00000346562 GOPCQ9HD26 462 aa26.7■■□□□ 1.87
NPAS3-201ENST00000346562 GSTO1P78417 241 aa26.7■■□□□ 1.87
NPAS3-201ENST00000346562 TCP11L1Q9NUJ3 509 aa26.7■■□□□ 1.87
NPAS3-201ENST00000346562 ST5P78524 1137 aa26.7■■□□□ 1.86
NPAS3-201ENST00000346562 TDRD12Q587J7 1177 aaKnown RBP26.7■■□□□ 1.86
NPAS3-201ENST00000346562 FAM114A1Q8IWE2 563 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms