RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 SLIT3O75094 1523 aa26.2■■□□□ 1.78
CCDC38-201ENST00000344280 PROSER3Q2NL68 480 aa26.19■■□□□ 1.78
CCDC38-201ENST00000344280 AMOTQ4VCS5 1084 aa26.19■■□□□ 1.78
CCDC38-201ENST00000344280 C1orf141Q5JVX7 400 aa26.19■■□□□ 1.78
CCDC38-201ENST00000344280 ADAMTSL3P82987 1691 aa26.18■■□□□ 1.78
CCDC38-201ENST00000344280 MAP4K4O95819 1239 aaPredicted RBP26.18■■□□□ 1.78
CCDC38-201ENST00000344280 CYP2E1P05181 493 aaPredicted RBP26.18■■□□□ 1.78
CCDC38-201ENST00000344280 RHPN1Q8TCX5 695 aa26.18■■□□□ 1.78
CCDC38-201ENST00000344280 NCAPD2Q15021 1401 aa26.18■■□□□ 1.78
CCDC38-201ENST00000344280 GAS2L3Q86XJ1 694 aa26.18■■□□□ 1.78
CCDC38-201ENST00000344280 ANO2Q9NQ90 1003 aa26.18■■□□□ 1.78
CCDC38-201ENST00000344280 NEK4P51957 841 aa26.17■■□□□ 1.78
CCDC38-201ENST00000344280 GIGYF1O75420 1035 aaPredicted RBP26.16■■□□□ 1.78
CCDC38-201ENST00000344280 KRT28Q7Z3Y7 464 aa26.16■■□□□ 1.78
CCDC38-201ENST00000344280 RAB11FIP3O75154 756 aa26.16■■□□□ 1.78
CCDC38-201ENST00000344280 SKOR2Q2VWA4 1001 aaPredicted RBP26.15■■□□□ 1.78
CCDC38-201ENST00000344280 PI4K2BQ8TCG2 481 aa26.15■■□□□ 1.78
CCDC38-201ENST00000344280 DBF4Q9UBU7 674 aaPredicted RBP26.15■■□□□ 1.78
CCDC38-201ENST00000344280 MRE11P49959 708 aa26.14■■□□□ 1.77
CCDC38-201ENST00000344280 NUCB2P80303 420 aa26.14■■□□□ 1.77
CCDC38-201ENST00000344280 GRPEL1Q9HAV7 217 aa26.14■■□□□ 1.77
CCDC38-201ENST00000344280 AOX1Q06278 1338 aa26.13■■□□□ 1.77
CCDC38-201ENST00000344280 PRKCSHP14314 528 aaPredicted RBP26.13■■□□□ 1.77
CCDC38-201ENST00000344280 PROSER2Q86WR7 435 aaPredicted RBP26.13■■□□□ 1.77
CCDC38-201ENST00000344280 MAP3K2Q9Y2U5 619 aa26.13■■□□□ 1.77
CCDC38-201ENST00000344280 ZDHHC9Q9Y397 364 aa26.13■■□□□ 1.77
CCDC38-201ENST00000344280 ZC3H6P61129 1189 aaKnown RBP26.13■■□□□ 1.77
CCDC38-201ENST00000344280 TRPM3Q9HCF6 1732 aaPredicted RBP26.13■■□□□ 1.77
CCDC38-201ENST00000344280 MCTP1Q6DN14 999 aa26.12■■□□□ 1.77
CCDC38-201ENST00000344280 TMX3Q96JJ7 454 aa26.12■■□□□ 1.77
CCDC38-201ENST00000344280 CWC22Q9HCG8 908 aaKnown RBP26.12■■□□□ 1.77
CCDC38-201ENST00000344280 HEG1Q9ULI3 1381 aa26.12■■□□□ 1.77
CCDC38-201ENST00000344280 FAM43AQ8N2R8 423 aa26.12■■□□□ 1.77
CCDC38-201ENST00000344280 KIF1BPQ96EK5 621 aa26.12■■□□□ 1.77
CCDC38-201ENST00000344280 CWF19L2Q2TBE0 894 aaKnown RBP26.11■■□□□ 1.77
CCDC38-201ENST00000344280 RGPD5Q99666 1765 aa26.11■■□□□ 1.77
CCDC38-201ENST00000344280 GOLGA6L22H0YM25 854 aa26.11■■□□□ 1.77
CCDC38-201ENST00000344280 PTMSP20962 102 aa26.11■■□□□ 1.77
CCDC38-201ENST00000344280 CHAMP1Q96JM3 812 aa26.11■■□□□ 1.77
CCDC38-201ENST00000344280 NOL8Q76FK4 1167 aaKnown RBP26.09■■□□□ 1.77
CCDC38-201ENST00000344280 DDX17Q92841 729 aaKnown RBP26.09■■□□□ 1.77
CCDC38-201ENST00000344280 CHMP4AQ9BY43 222 aa26.09■■□□□ 1.77
CCDC38-201ENST00000344280 C1orf167Q5SNV9 1468 aa26.09■■□□□ 1.77
CCDC38-201ENST00000344280 ERBB3P21860 1342 aa26.09■■□□□ 1.77
CCDC38-201ENST00000344280 DDX49Q9Y6V7 483 aaKnown RBP26.09■■□□□ 1.77
CCDC38-201ENST00000344280 MCCP23508 829 aa26.08■■□□□ 1.77
CCDC38-201ENST00000344280 KSR2Q6VAB6 950 aa26.08■■□□□ 1.77
CCDC38-201ENST00000344280 UPF3BQ9BZI7 483 aaKnown RBP26.08■■□□□ 1.77
CCDC38-201ENST00000344280 CAMTA1Q9Y6Y1 1673 aa26.07■■□□□ 1.76
CCDC38-201ENST00000344280 RRAGDQ9NQL2 400 aaPredicted RBP26.07■■□□□ 1.76
CCDC38-201ENST00000344280 OVOS2A0A0G2JMS6 1433 aa26.07■■□□□ 1.76
CCDC38-201ENST00000344280 ANAPC15P60006 121 aa26.07■■□□□ 1.76
CCDC38-201ENST00000344280 KLHL40Q2TBA0 621 aa26.07■■□□□ 1.76
CCDC38-201ENST00000344280 C9orf78Q9NZ63 289 aaPredicted RBP26.07■■□□□ 1.76
CCDC38-201ENST00000344280 PA2G4Q9UQ80 394 aaKnown RBP26.07■■□□□ 1.76
CCDC38-201ENST00000344280 SLC39A6Q13433 755 aa26.06■■□□□ 1.76
CCDC38-201ENST00000344280 LMBRD1Q9NUN5 540 aa26.06■■□□□ 1.76
CCDC38-201ENST00000344280 MTX1Q13505 466 aa26.05■■□□□ 1.76
CCDC38-201ENST00000344280 FOXD4L5Q5VV16 416 aaPredicted RBP26.05■■□□□ 1.76
CCDC38-201ENST00000344280 FOXD4L4Q8WXT5 416 aaPredicted RBP26.05■■□□□ 1.76
CCDC38-201ENST00000344280 C19orf44Q9H6X5 657 aa26.05■■□□□ 1.76
CCDC38-201ENST00000344280 AIMP1Q12904 312 aaKnown RBP26.04■■□□□ 1.76
CCDC38-201ENST00000344280 OS9Q13438 667 aaPredicted RBP26.04■■□□□ 1.76
CCDC38-201ENST00000344280 ISY1Q9ULR0 285 aaKnown RBP26.04■■□□□ 1.76
CCDC38-201ENST00000344280 SIPA1L3O60292 1781 aaPredicted RBP26.04■■□□□ 1.76
CCDC38-201ENST00000344280 PDIA6Q15084 440 aa26.04■■□□□ 1.76
CCDC38-201ENST00000344280 ALDH1L1O75891 902 aa26.03■■□□□ 1.76
CCDC38-201ENST00000344280 SGSM2O43147 1006 aa26.03■■□□□ 1.76
CCDC38-201ENST00000344280 HSPA4P34932 840 aa26.03■■□□□ 1.76
CCDC38-201ENST00000344280 IL17RAQ96F46 866 aa26.03■■□□□ 1.76
CCDC38-201ENST00000344280 CUL4AQ13619 759 aa26.02■■□□□ 1.76
CCDC38-201ENST00000344280 HSP90AB4PQ58FF6 505 aa26.02■■□□□ 1.76
CCDC38-201ENST00000344280 KAZALD1Q96I82 304 aa26.02■■□□□ 1.76
CCDC38-201ENST00000344280 NLRP2Q9NX02 1062 aa26.02■■□□□ 1.76
CCDC38-201ENST00000344280 HYPKQ9NX55 129 aa26.02■■□□□ 1.76
CCDC38-201ENST00000344280 MCM2P49736 904 aa26.01■■□□□ 1.75
CCDC38-201ENST00000344280 CNTROBQ8N137 903 aa26■■□□□ 1.75
CCDC38-201ENST00000344280 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26■■□□□ 1.75
CCDC38-201ENST00000344280 ZNF790Q6PG37 636 aa26■■□□□ 1.75
CCDC38-201ENST00000344280 CWC27Q6UX04 472 aaKnown RBP26■■□□□ 1.75
CCDC38-201ENST00000344280 SUCLG2Q96I99 432 aa26■■□□□ 1.75
CCDC38-201ENST00000344280 KDM6AO15550 1401 aaPredicted RBP26■■□□□ 1.75
CCDC38-201ENST00000344280 USP42Q9H9J4 1324 aaKnown RBP25.99■■□□□ 1.75
CCDC38-201ENST00000344280 PRPF40AO75400 957 aaKnown RBP25.99■■□□□ 1.75
CCDC38-201ENST00000344280 DDX21Q9NR30 783 aaKnown RBP eCLIP25.99■■□□□ 1.75
CCDC38-201ENST00000344280 ADAMTS7Q9UKP4 1686 aa25.99■■□□□ 1.75
CCDC38-201ENST00000344280 RAD50Q92878 1312 aa25.99■■□□□ 1.75
CCDC38-201ENST00000344280 NCLP19338 710 aaKnown RBP25.99■■□□□ 1.75
CCDC38-201ENST00000344280 CABLES1Q8TDN4 633 aa25.99■■□□□ 1.75
CCDC38-201ENST00000344280 LSG1Q9H089 658 aaKnown RBP25.99■■□□□ 1.75
CCDC38-201ENST00000344280 ALS2Q96Q42 1657 aa25.98■■□□□ 1.75
CCDC38-201ENST00000344280 NFATC2IPQ8NCF5 419 aa25.98■■□□□ 1.75
CCDC38-201ENST00000344280 LINS1Q8NG48 757 aa25.98■■□□□ 1.75
CCDC38-201ENST00000344280 RAPGEF4Q8WZA2 1011 aa25.98■■□□□ 1.75
CCDC38-201ENST00000344280 SPG7Q9UQ90 795 aa25.98■■□□□ 1.75
CCDC38-201ENST00000344280 NPHP3Q7Z494 1330 aa25.98■■□□□ 1.75
CCDC38-201ENST00000344280 GRM8O00222 908 aa25.98■■□□□ 1.75
CCDC38-201ENST00000344280 CAVIN1Q6NZI2 390 aaKnown RBP25.98■■□□□ 1.75
CCDC38-201ENST00000344280 CLASRPQ8N2M8 674 aaKnown RBP25.98■■□□□ 1.75
CCDC38-201ENST00000344280 KIF1AQ12756 1690 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms