RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 PCNTO95613 3336 aa23.24■■□□□ 1.31
TRA2B-202ENST00000342294 POTECB2RU33 542 aa23.23■■□□□ 1.31
TRA2B-202ENST00000342294 NARFQ9UHQ1 456 aa23.23■■□□□ 1.31
TRA2B-202ENST00000342294 CYP19A1P11511 503 aaPredicted RBP23.22■■□□□ 1.31
TRA2B-202ENST00000342294 TTLL6Q8N841 843 aa23.22■■□□□ 1.31
TRA2B-202ENST00000342294 BCL2L12Q9HB09 334 aa23.22■■□□□ 1.31
TRA2B-202ENST00000342294 NFKBIEO00221 500 aa23.21■■□□□ 1.31
TRA2B-202ENST00000342294 NRXN2Q9P2S2 1712 aa23.21■■□□□ 1.31
TRA2B-202ENST00000342294 SERPINB2P05120 415 aa23.2■■□□□ 1.3
TRA2B-202ENST00000342294 SULT6B1Q6IMI4 303 aa23.2■■□□□ 1.3
TRA2B-202ENST00000342294 SLC52A2Q9HAB3 445 aa23.19■■□□□ 1.3
TRA2B-202ENST00000342294 AFDNP55196 1824 aaKnown RBP23.18■■□□□ 1.3
TRA2B-202ENST00000342294 COL15A1P39059 1388 aa23.17■■□□□ 1.3
TRA2B-202ENST00000342294 AKAP4Q5JQC9 854 aa23.17■■□□□ 1.3
TRA2B-202ENST00000342294 C2CD5Q86YS7 1000 aa23.17■■□□□ 1.3
TRA2B-202ENST00000342294 LGR6Q9HBX8 967 aa23.17■■□□□ 1.3
TRA2B-202ENST00000342294 ZBTB1Q9Y2K1 713 aa23.17■■□□□ 1.3
TRA2B-202ENST00000342294 DLEC1Q9Y238 1755 aa23.17■■□□□ 1.3
TRA2B-202ENST00000342294 IL13P35225 146 aa23.16■■□□□ 1.3
TRA2B-202ENST00000342294 SCN11AQ9UI33 1791 aa23.16■■□□□ 1.3
TRA2B-202ENST00000342294 CARMIL3Q8ND23 1372 aa23.15■■□□□ 1.3
TRA2B-202ENST00000342294 H0YIN7 160 aa23.15■■□□□ 1.3
TRA2B-202ENST00000342294 SLC39A6Q13433 755 aa23.15■■□□□ 1.3
TRA2B-202ENST00000342294 POLR3GLQ9BT43 218 aa23.15■■□□□ 1.3
TRA2B-202ENST00000342294 PANK3Q9H999 370 aa23.15■■□□□ 1.3
TRA2B-202ENST00000342294 DPY19L2Q6NUT2 758 aa23.14■■□□□ 1.29
TRA2B-202ENST00000342294 MRC1P22897 1456 aa23.13■■□□□ 1.29
TRA2B-202ENST00000342294 TIAM2Q8IVF5 1701 aa23.13■■□□□ 1.29
TRA2B-202ENST00000342294 RNMTO43148 476 aaKnown RBP23.12■■□□□ 1.29
TRA2B-202ENST00000342294 CREBZFQ9NS37 354 aa23.12■■□□□ 1.29
TRA2B-202ENST00000342294 MORC1Q86VD1 984 aa23.11■■□□□ 1.29
TRA2B-202ENST00000342294 VSIG10Q8N0Z9 540 aa23.11■■□□□ 1.29
TRA2B-202ENST00000342294 EIF5P55010 431 aaKnown RBP23.09■■□□□ 1.29
TRA2B-202ENST00000342294 ERFEQ4G0M1 354 aa23.09■■□□□ 1.29
TRA2B-202ENST00000342294 CHADLQ6NUI6 762 aa23.09■■□□□ 1.29
TRA2B-202ENST00000342294 TIMELESSQ9UNS1 1208 aa23.09■■□□□ 1.29
TRA2B-202ENST00000342294 BRIP1Q9BX63 1249 aa23.08■■□□□ 1.29
TRA2B-202ENST00000342294 PDZRN3Q9UPQ7 1066 aa23.08■■□□□ 1.29
TRA2B-202ENST00000342294 CCDC88AQ3V6T2 1871 aa23.08■■□□□ 1.29
TRA2B-202ENST00000342294 LTBP3Q9NS15 1303 aa23.08■■□□□ 1.28
TRA2B-202ENST00000342294 C21orf2O43822 256 aa23.07■■□□□ 1.28
TRA2B-202ENST00000342294 POTEIP0CG38 1075 aa23.07■■□□□ 1.28
TRA2B-202ENST00000342294 POTEJP0CG39 1038 aa23.07■■□□□ 1.28
TRA2B-202ENST00000342294 CANXP27824 592 aaKnown RBP23.07■■□□□ 1.28
TRA2B-202ENST00000342294 BICDL1Q6ZP65 573 aa23.07■■□□□ 1.28
TRA2B-202ENST00000342294 MKRN1Q9UHC7 482 aaKnown RBP23.07■■□□□ 1.28
TRA2B-202ENST00000342294 TBC1D9BQ66K14 1250 aa23.06■■□□□ 1.28
TRA2B-202ENST00000342294 ZNF622Q969S3 477 aaKnown RBP eCLIP23.06■■□□□ 1.282e-6■□□□□ 11.1
TRA2B-202ENST00000342294 PDE6BP35913 854 aa23.05■■□□□ 1.28
TRA2B-202ENST00000342294 A0A087WZG4 1122 aa23.04■■□□□ 1.28
TRA2B-202ENST00000342294 FOXN1O15353 648 aa23.04■■□□□ 1.28
TRA2B-202ENST00000342294 PRR5LQ6MZQ0 368 aa23.04■■□□□ 1.28
TRA2B-202ENST00000342294 ZNF219Q9P2Y4 722 aaPredicted RBP23.04■■□□□ 1.28
TRA2B-202ENST00000342294 CNTNAP1P78357 1384 aa23.03■■□□□ 1.28
TRA2B-202ENST00000342294 ANKRD31Q8N7Z5 1873 aa23.03■■□□□ 1.28
TRA2B-202ENST00000342294 DDNO94850 711 aaPredicted RBP23.03■■□□□ 1.28
TRA2B-202ENST00000342294 PRDM10Q9NQV6 1147 aa23.03■■□□□ 1.28
TRA2B-202ENST00000342294 FER1L6Q2WGJ9 1857 aa23.02■■□□□ 1.28
TRA2B-202ENST00000342294 STARD3NLO95772 234 aa23.02■■□□□ 1.28
TRA2B-202ENST00000342294 MTHFSDQ2M296 383 aaKnown RBP23.02■■□□□ 1.28
TRA2B-202ENST00000342294 TAOK3Q9H2K8 898 aa23.02■■□□□ 1.28
TRA2B-202ENST00000342294 PASKQ96RG2 1323 aa23.02■■□□□ 1.28
TRA2B-202ENST00000342294 DICER1Q9UPY3 1922 aaKnown RBP23.02■■□□□ 1.28
TRA2B-202ENST00000342294 CCDC24Q8N4L8 307 aa23.01■■□□□ 1.27
TRA2B-202ENST00000342294 HMOX1P09601 288 aa23■■□□□ 1.27
TRA2B-202ENST00000342294 UBR2Q8IWV8 1755 aa22.99■■□□□ 1.27
TRA2B-202ENST00000342294 COL11A2P13942 1736 aaPredicted RBP22.99■■□□□ 1.27
TRA2B-202ENST00000342294 HSPA5P11021 654 aaKnown RBP22.98■■□□□ 1.27
TRA2B-202ENST00000342294 STYK1Q6J9G0 422 aa22.98■■□□□ 1.27
TRA2B-202ENST00000342294 CNKSR1Q969H4 720 aa22.98■■□□□ 1.27
TRA2B-202ENST00000342294 ZNF496Q96IT1 587 aaPredicted RBP22.98■■□□□ 1.27
TRA2B-202ENST00000342294 L3MBTL3Q96JM7 780 aaPredicted RBP22.98■■□□□ 1.27
TRA2B-202ENST00000342294 TBC1D2BQ9UPU7 963 aa22.98■■□□□ 1.27
TRA2B-202ENST00000342294 SRGNP10124 158 aa22.97■■□□□ 1.27
TRA2B-202ENST00000342294 EIF4G2P78344 907 aaKnown RBP eCLIP22.97■■□□□ 1.27
TRA2B-202ENST00000342294 PRPF40BQ6NWY9 871 aaKnown RBP22.97■■□□□ 1.27
TRA2B-202ENST00000342294 LDHDQ86WU2 507 aa22.97■■□□□ 1.27
TRA2B-202ENST00000342294 KNSTRNQ9Y448 316 aa22.97■■□□□ 1.27
TRA2B-202ENST00000342294 IQCA1LA6NCM1 817 aa22.96■■□□□ 1.27
TRA2B-202ENST00000342294 ITGBL1O95965 494 aaPredicted RBP22.96■■□□□ 1.27
TRA2B-202ENST00000342294 IL6STP40189 918 aaPredicted RBP22.96■■□□□ 1.27
TRA2B-202ENST00000342294 AMER1Q5JTC6 1135 aaPredicted RBP22.96■■□□□ 1.27
TRA2B-202ENST00000342294 TTC5Q8N0Z6 440 aa22.96■■□□□ 1.27
TRA2B-202ENST00000342294 TEX13AQ9BXU3 409 aaPredicted RBP22.96■■□□□ 1.27
TRA2B-202ENST00000342294 TAF1DQ9H5J8 278 aaPredicted RBP22.96■■□□□ 1.27
TRA2B-202ENST00000342294 HEG1Q9ULI3 1381 aa22.96■■□□□ 1.27
TRA2B-202ENST00000342294 CTCFP49711 727 aaPredicted RBP22.95■■□□□ 1.26
TRA2B-202ENST00000342294 VEGFBP49765 207 aa22.95■■□□□ 1.26
TRA2B-202ENST00000342294 SCN7AQ01118 1682 aa22.95■■□□□ 1.26
TRA2B-202ENST00000342294 SOGA3Q5TF21 947 aa22.95■■□□□ 1.26
TRA2B-202ENST00000342294 C7orf43Q8WVR3 580 aa22.95■■□□□ 1.26
TRA2B-202ENST00000342294 CAMTA2O94983 1202 aa22.94■■□□□ 1.26
TRA2B-202ENST00000342294 ZNF790Q6PG37 636 aa22.94■■□□□ 1.26
TRA2B-202ENST00000342294 CNBD1Q8NA66 436 aa22.94■■□□□ 1.26
TRA2B-202ENST00000342294 SETDB2Q96T68 719 aa22.94■■□□□ 1.26
TRA2B-202ENST00000342294 WBP1LQ9NX94 342 aa22.94■■□□□ 1.26
TRA2B-202ENST00000342294 SLX4Q8IY92 1834 aa22.94■■□□□ 1.26
TRA2B-202ENST00000342294 TMEM88BA6NKF7 163 aa22.93■■□□□ 1.26
TRA2B-202ENST00000342294 MASTLQ96GX5 879 aa22.93■■□□□ 1.26
TRA2B-202ENST00000342294 VIRMAQ69YN4 1812 aaKnown RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms