RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 UNC5CLQ8IV45 518 aa26.74■■□□□ 1.87
VRK2-201ENST00000340157 SIRT2Q8IXJ6 389 aa26.74■■□□□ 1.87
VRK2-201ENST00000340157 DOT1LQ8TEK3 1739 aa26.74■■□□□ 1.87
VRK2-201ENST00000340157 CDCA7Q9BWT1 371 aaPredicted RBP26.74■■□□□ 1.87
VRK2-201ENST00000340157 USP16Q9Y5T5 823 aa26.74■■□□□ 1.87
VRK2-201ENST00000340157 ADCY9O60503 1353 aa26.74■■□□□ 1.87
VRK2-201ENST00000340157 DDX21Q9NR30 783 aaKnown RBP eCLIP26.73■■□□□ 1.87
VRK2-201ENST00000340157 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.72■■□□□ 1.87
VRK2-201ENST00000340157 BARGINQ6ZT62 677 aa26.72■■□□□ 1.87
VRK2-201ENST00000340157 NGLY1Q96IV0 654 aa26.72■■□□□ 1.87
VRK2-201ENST00000340157 KAT6BQ8WYB5 2073 aa26.71■■□□□ 1.87
VRK2-201ENST00000340157 FNBP4Q8N3X1 1017 aaPredicted RBP26.71■■□□□ 1.87
VRK2-201ENST00000340157 PIGBQ92521 554 aa26.7■■□□□ 1.87
VRK2-201ENST00000340157 TMOD3Q9NYL9 352 aa26.7■■□□□ 1.87
VRK2-201ENST00000340157 PI4KAP2A4QPH2 592 aa26.7■■□□□ 1.86
VRK2-201ENST00000340157 LRP10Q7Z4F1 713 aa26.7■■□□□ 1.86
VRK2-201ENST00000340157 SMC5Q8IY18 1101 aa26.7■■□□□ 1.86
VRK2-201ENST00000340157 PI4KAP1Q8N8J0 262 aa26.7■■□□□ 1.86
VRK2-201ENST00000340157 HYPKQ9NX55 129 aa26.7■■□□□ 1.86
VRK2-201ENST00000340157 PDZRN3Q9UPQ7 1066 aa26.7■■□□□ 1.86
VRK2-201ENST00000340157 CCDC9Q9Y3X0 531 aaKnown RBP26.69■■□□□ 1.86
VRK2-201ENST00000340157 DDB1Q16531 1140 aa26.68■■□□□ 1.86
VRK2-201ENST00000340157 BCL9O00512 1426 aa26.68■■□□□ 1.86
VRK2-201ENST00000340157 VPS72Q15906 364 aa26.68■■□□□ 1.86
VRK2-201ENST00000340157 DNAAF4Q8WXU2 420 aa26.68■■□□□ 1.86
VRK2-201ENST00000340157 RGS3P49796 1198 aa26.67■■□□□ 1.86
VRK2-201ENST00000340157 BEND3Q5T5X7 828 aa26.66■■□□□ 1.86
VRK2-201ENST00000340157 ASAP1Q9ULH1 1129 aa26.66■■□□□ 1.86
VRK2-201ENST00000340157 PTCD1O75127 700 aaKnown RBP26.65■■□□□ 1.86
VRK2-201ENST00000340157 MYL6BP14649 208 aa26.64■■□□□ 1.86
VRK2-201ENST00000340157 PIP4K2AP48426 406 aaPredicted RBP26.64■■□□□ 1.86
VRK2-201ENST00000340157 CEP85Q6P2H3 762 aa26.64■■□□□ 1.86
VRK2-201ENST00000340157 ANKRD44Q8N8A2 993 aa26.64■■□□□ 1.86
VRK2-201ENST00000340157 MARCH10Q8NA82 808 aaPredicted RBP26.64■■□□□ 1.86
VRK2-201ENST00000340157 KSR2Q6VAB6 950 aa26.64■■□□□ 1.85
VRK2-201ENST00000340157 USP44Q9H0E7 712 aa26.64■■□□□ 1.85
VRK2-201ENST00000340157 ATG3Q9NT62 314 aa26.64■■□□□ 1.85
VRK2-201ENST00000340157 MAP3K2Q9Y2U5 619 aa26.63■■□□□ 1.85
VRK2-201ENST00000340157 SRCIN1Q9C0H9 1055 aa26.62■■□□□ 1.85
VRK2-201ENST00000340157 FAM98CQ17RN3 349 aaKnown RBP26.62■■□□□ 1.85
VRK2-201ENST00000340157 RBM19Q9Y4C8 960 aaKnown RBP26.62■■□□□ 1.85
VRK2-201ENST00000340157 NBPF26B4DH59 902 aa26.61■■□□□ 1.85
VRK2-201ENST00000340157 AIMP1Q12904 312 aaKnown RBP26.61■■□□□ 1.85
VRK2-201ENST00000340157 NBPF14Q5TI25 921 aa26.61■■□□□ 1.85
VRK2-201ENST00000340157 NBPF10Q6P3W6 841 aaKnown RBP26.61■■□□□ 1.85
VRK2-201ENST00000340157 NBPF15Q8N660 670 aa26.61■■□□□ 1.85
VRK2-201ENST00000340157 XAGE3Q8WTP9 111 aa26.61■■□□□ 1.85
VRK2-201ENST00000340157 USP21Q9UK80 565 aa26.61■■□□□ 1.85
VRK2-201ENST00000340157 RPAP2Q8IXW5 612 aaPredicted RBP26.6■■□□□ 1.85
VRK2-201ENST00000340157 ARFGEF2Q9Y6D5 1785 aa26.6■■□□□ 1.85
VRK2-201ENST00000340157 THSD7AQ9UPZ6 1657 aa26.59■■□□□ 1.85
VRK2-201ENST00000340157 GNAI3P08754 354 aa26.59■■□□□ 1.85
VRK2-201ENST00000340157 PRIM1P49642 420 aaKnown RBP26.59■■□□□ 1.85
VRK2-201ENST00000340157 COPS6Q7L5N1 327 aa26.59■■□□□ 1.85
VRK2-201ENST00000340157 ERBB4Q15303 1308 aa26.59■■□□□ 1.85
VRK2-201ENST00000340157 GNAI2P04899 355 aa26.58■■□□□ 1.85
VRK2-201ENST00000340157 NUCB1Q02818 461 aa26.58■■□□□ 1.85
VRK2-201ENST00000340157 PDE4AP27815 886 aa26.57■■□□□ 1.84
VRK2-201ENST00000340157 GCC1Q96CN9 775 aa26.57■■□□□ 1.84
VRK2-201ENST00000340157 DDX58O95786 925 aaKnown RBP26.57■■□□□ 1.84
VRK2-201ENST00000340157 NUP188Q5SRE5 1749 aa26.56■■□□□ 1.84
VRK2-201ENST00000340157 A1BGP04217 495 aa26.56■■□□□ 1.84
VRK2-201ENST00000340157 SYTL4Q96C24 671 aaPredicted RBP26.56■■□□□ 1.84
VRK2-201ENST00000340157 TJP1Q07157 1748 aa26.56■■□□□ 1.84
VRK2-201ENST00000340157 VSIG10Q8N0Z9 540 aa26.55■■□□□ 1.84
VRK2-201ENST00000340157 SLC4A9Q96Q91 983 aa26.55■■□□□ 1.84
VRK2-201ENST00000340157 DCTPP1Q9H773 170 aa26.55■■□□□ 1.84
VRK2-201ENST00000340157 LRRFIP2Q9Y608 721 aaKnown RBP26.55■■□□□ 1.84
VRK2-201ENST00000340157 NBPF7P0C2Y1 421 aaPredicted RBP26.54■■□□□ 1.84
VRK2-201ENST00000340157 ALDH1L1O75891 902 aa26.53■■□□□ 1.84
VRK2-201ENST00000340157 UBTFL1P0CB47 393 aaPredicted RBP26.53■■□□□ 1.84
VRK2-201ENST00000340157 CWF19L2Q2TBE0 894 aaKnown RBP26.53■■□□□ 1.84
VRK2-201ENST00000340157 MEX3CQ5U5Q3 659 aaKnown RBP26.53■■□□□ 1.84
VRK2-201ENST00000340157 DNAJC10Q8IXB1 793 aa26.53■■□□□ 1.84
VRK2-201ENST00000340157 BACH2Q9BYV9 841 aa26.53■■□□□ 1.84
VRK2-201ENST00000340157 AFDNP55196 1824 aaKnown RBP26.53■■□□□ 1.84
VRK2-201ENST00000340157 AFF2P51816 1311 aa26.53■■□□□ 1.84
VRK2-201ENST00000340157 RIC3Q7Z5B4 369 aa26.53■■□□□ 1.84
VRK2-201ENST00000340157 ACSBG1Q96GR2 724 aa26.53■■□□□ 1.84
VRK2-201ENST00000340157 IGKV5-2P06315 115 aa26.52■■□□□ 1.84
VRK2-201ENST00000340157 CHD1LQ86WJ1 897 aa26.52■■□□□ 1.84
VRK2-201ENST00000340157 LINS1Q8NG48 757 aa26.52■■□□□ 1.84
VRK2-201ENST00000340157 ANKRD13DQ6ZTN6 518 aa26.51■■□□□ 1.83
VRK2-201ENST00000340157 RBM42Q9BTD8 480 aaKnown RBP26.51■■□□□ 1.83
VRK2-201ENST00000340157 LNPKQ9C0E8 428 aa26.51■■□□□ 1.83
VRK2-201ENST00000340157 PNMA6EA0A0J9YXQ4 647 aa26.5■■□□□ 1.83
VRK2-201ENST00000340157 ANKRD45Q5TZF3 282 aa26.5■■□□□ 1.83
VRK2-201ENST00000340157 METTL22Q9BUU2 404 aaPredicted RBP26.5■■□□□ 1.83
VRK2-201ENST00000340157 ATRNO75882 1429 aa26.49■■□□□ 1.83
VRK2-201ENST00000340157 ATP8B2P98198 1209 aa26.49■■□□□ 1.83
VRK2-201ENST00000340157 C8orf34Q49A92 452 aa26.49■■□□□ 1.83
VRK2-201ENST00000340157 IBTKQ9P2D0 1353 aaPredicted RBP26.48■■□□□ 1.83
VRK2-201ENST00000340157 TTLL7Q6ZT98 887 aa26.48■■□□□ 1.83
VRK2-201ENST00000340157 PLBD2Q8NHP8 589 aa26.47■■□□□ 1.83
VRK2-201ENST00000340157 TEX13AQ9BXU3 409 aaPredicted RBP26.47■■□□□ 1.83
VRK2-201ENST00000340157 NEURL1BA8MQ27 555 aa26.47■■□□□ 1.83
VRK2-201ENST00000340157 HMMRO75330 724 aa26.47■■□□□ 1.83
VRK2-201ENST00000340157 GJD4Q96KN9 370 aaPredicted RBP26.47■■□□□ 1.83
VRK2-201ENST00000340157 UTYO14607 1347 aa26.46■■□□□ 1.83
VRK2-201ENST00000340157 MYD88Q99836 296 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 175.4 ms