RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 CD163L1Q9NR16 1453 aa11.24□□□□□ -0.61
NECAP1-201ENST00000339754 ZSCAN25Q6NSZ9 544 aa11.23□□□□□ -0.61
NECAP1-201ENST00000339754 DNAJC2Q99543 621 aaKnown RBP11.23□□□□□ -0.61
NECAP1-201ENST00000339754 SSH2Q76I76 1423 aa11.23□□□□□ -0.61
NECAP1-201ENST00000339754 KIAA0232Q92628 1395 aa11.23□□□□□ -0.61
NECAP1-201ENST00000339754 FBLN1P23142 703 aa11.23□□□□□ -0.61
NECAP1-201ENST00000339754 ZNF397Q8NF99 534 aaPredicted RBP11.23□□□□□ -0.61
NECAP1-201ENST00000339754 FAM200AQ8TCP9 573 aa11.23□□□□□ -0.61
NECAP1-201ENST00000339754 STAG3Q9UJ98 1225 aa11.23□□□□□ -0.61
NECAP1-201ENST00000339754 MSH6P52701 1360 aa11.23□□□□□ -0.61
NECAP1-201ENST00000339754 RBM6P78332 1123 aaKnown RBP11.23□□□□□ -0.61
NECAP1-201ENST00000339754 POLKQ9UBT6 870 aa11.23□□□□□ -0.61
NECAP1-201ENST00000339754 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.23□□□□□ -0.61
NECAP1-201ENST00000339754 MRVI1Q9Y6F6 885 aa11.23□□□□□ -0.61
NECAP1-201ENST00000339754 CLTCQ00610 1675 aaKnown RBP11.22□□□□□ -0.61
NECAP1-201ENST00000339754 HSPA4P34932 840 aa11.22□□□□□ -0.61
NECAP1-201ENST00000339754 FAM193AP78312 1265 aa11.22□□□□□ -0.61
NECAP1-201ENST00000339754 SAFB2Q14151 953 aaKnown RBP eCLIP11.22□□□□□ -0.61
NECAP1-201ENST00000339754 TERF2IPQ9NYB0 399 aa11.22□□□□□ -0.61
NECAP1-201ENST00000339754 CALCOCO1Q9P1Z2 691 aa11.22□□□□□ -0.61
NECAP1-201ENST00000339754 AGLP35573 1532 aa11.22□□□□□ -0.61
NECAP1-201ENST00000339754 MYO5BQ9ULV0 1848 aa11.22□□□□□ -0.61
NECAP1-201ENST00000339754 ZFYVE9O95405 1425 aa11.22□□□□□ -0.61
NECAP1-201ENST00000339754 SRPK2P78362 688 aaKnown RBP11.22□□□□□ -0.61
NECAP1-201ENST00000339754 DNM1Q05193 864 aaKnown RBP11.22□□□□□ -0.61
NECAP1-201ENST00000339754 LUZP1Q86V48 1076 aa11.22□□□□□ -0.61
NECAP1-201ENST00000339754 PLA2G4DQ86XP0 818 aa11.22□□□□□ -0.61
NECAP1-201ENST00000339754 TTC14Q96N46 770 aa11.22□□□□□ -0.61
NECAP1-201ENST00000339754 IL25Q9H293 177 aa11.22□□□□□ -0.61
NECAP1-201ENST00000339754 STK26Q9P289 416 aa11.22□□□□□ -0.61
NECAP1-201ENST00000339754 ATP6V1DQ9Y5K8 247 aa11.22□□□□□ -0.61
NECAP1-201ENST00000339754 TMEM131LA2VDJ0 1609 aa11.21□□□□□ -0.61
NECAP1-201ENST00000339754 CACTINQ8WUQ7 758 aaKnown RBP11.21□□□□□ -0.61
NECAP1-201ENST00000339754 FAM83GA6ND36 823 aa11.21□□□□□ -0.62
NECAP1-201ENST00000339754 ZNF75DP51815 510 aa11.21□□□□□ -0.62
NECAP1-201ENST00000339754 TPD52L1Q16890 204 aaPredicted RBP11.21□□□□□ -0.62
NECAP1-201ENST00000339754 CEP135Q66GS9 1140 aa11.21□□□□□ -0.62
NECAP1-201ENST00000339754 ZNF215Q9UL58 517 aaPredicted RBP11.21□□□□□ -0.62
NECAP1-201ENST00000339754 ERICH4A6NGS2 130 aa11.2□□□□□ -0.62
NECAP1-201ENST00000339754 EPB41L2O43491 1005 aaKnown RBP11.2□□□□□ -0.62
NECAP1-201ENST00000339754 HMMRO75330 724 aa11.2□□□□□ -0.62
NECAP1-201ENST00000339754 TYRO3Q06418 890 aa11.2□□□□□ -0.62
NECAP1-201ENST00000339754 FBXO38Q6PIJ6 1188 aa11.2□□□□□ -0.62
NECAP1-201ENST00000339754 RUFY3Q7L099 469 aa11.2□□□□□ -0.62
NECAP1-201ENST00000339754 UNC5CLQ8IV45 518 aa11.2□□□□□ -0.62
NECAP1-201ENST00000339754 RILPL2Q969X0 211 aa11.2□□□□□ -0.62
NECAP1-201ENST00000339754 KIF1BPQ96EK5 621 aa11.2□□□□□ -0.62
NECAP1-201ENST00000339754 ST7Q9NRC1 585 aa11.2□□□□□ -0.62
NECAP1-201ENST00000339754 DLG5Q8TDM6 1919 aa11.2□□□□□ -0.62
NECAP1-201ENST00000339754 CPSF1Q10570 1443 aaKnown RBP11.2□□□□□ -0.62
NECAP1-201ENST00000339754 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.2□□□□□ -0.62
NECAP1-201ENST00000339754 CBX8Q9HC52 389 aa11.2□□□□□ -0.62
NECAP1-201ENST00000339754 MTMR6Q9Y217 621 aa11.2□□□□□ -0.62
NECAP1-201ENST00000339754 IL13P35225 146 aa11.19□□□□□ -0.62
NECAP1-201ENST00000339754 AK2P54819 239 aa11.19□□□□□ -0.62
NECAP1-201ENST00000339754 DCTN1Q14203 1278 aa11.19□□□□□ -0.62
NECAP1-201ENST00000339754 CREBRFQ8IUR6 639 aa11.19□□□□□ -0.62
NECAP1-201ENST00000339754 DRC7Q8IY82 874 aa11.19□□□□□ -0.62
NECAP1-201ENST00000339754 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.19□□□□□ -0.62
NECAP1-201ENST00000339754 LARP6Q9BRS8 491 aaKnown RBP11.19□□□□□ -0.62
NECAP1-201ENST00000339754 ESF1Q9H501 851 aaKnown RBP11.19□□□□□ -0.62
NECAP1-201ENST00000339754 ZNF446Q9NWS9 450 aa11.19□□□□□ -0.62
NECAP1-201ENST00000339754 EXOC6BQ9Y2D4 811 aa11.19□□□□□ -0.62
NECAP1-201ENST00000339754 RIMS2Q9UQ26 1411 aa11.19□□□□□ -0.62
NECAP1-201ENST00000339754 TRIM6-TRIM34B2RNG4 842 aa11.19□□□□□ -0.62
NECAP1-201ENST00000339754 CYP2C19P33261 490 aa11.19□□□□□ -0.62
NECAP1-201ENST00000339754 MAP3K11Q16584 847 aa11.19□□□□□ -0.62
NECAP1-201ENST00000339754 CCDC144BQ3MJ40 725 aa11.19□□□□□ -0.62
NECAP1-201ENST00000339754 SLFNL1Q499Z3 407 aa11.19□□□□□ -0.62
NECAP1-201ENST00000339754 CCDC144CPQ8IYA2 1237 aa11.19□□□□□ -0.62
NECAP1-201ENST00000339754 STAP2Q9UGK3 403 aa11.19□□□□□ -0.62
NECAP1-201ENST00000339754 LIMCH1Q9UPQ0 1083 aa11.19□□□□□ -0.62
NECAP1-201ENST00000339754 SMC3Q9UQE7 1217 aa11.19□□□□□ -0.62
NECAP1-201ENST00000339754 LMOD3Q0VAK6 560 aa11.18□□□□□ -0.62
NECAP1-201ENST00000339754 NYAP1Q6ZVC0 841 aa11.18□□□□□ -0.62
NECAP1-201ENST00000339754 ZNF592Q92610 1267 aa11.18□□□□□ -0.62
NECAP1-201ENST00000339754 TRIM5Q9C035 493 aa11.18□□□□□ -0.62
NECAP1-201ENST00000339754 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.18□□□□□ -0.62
NECAP1-201ENST00000339754 SNX14Q9Y5W7 946 aa11.18□□□□□ -0.62
NECAP1-201ENST00000339754 V9GYY5 206 aaPredicted RBP11.18□□□□□ -0.62
NECAP1-201ENST00000339754 PTPRCP08575 1304 aa11.18□□□□□ -0.62
NECAP1-201ENST00000339754 ERBB3P21860 1342 aa11.18□□□□□ -0.62
NECAP1-201ENST00000339754 USP27XA6NNY8 438 aa11.18□□□□□ -0.62
NECAP1-201ENST00000339754 LIG1P18858 919 aa11.18□□□□□ -0.62
NECAP1-201ENST00000339754 CAMK4Q16566 473 aa11.18□□□□□ -0.62
NECAP1-201ENST00000339754 HNRNPH2P55795 449 aaKnown RBP11.17□□□□□ -0.62
NECAP1-201ENST00000339754 ANO6Q4KMQ2 910 aa11.17□□□□□ -0.62
NECAP1-201ENST00000339754 TDRD7Q8NHU6 1098 aaKnown RBP11.17□□□□□ -0.62
NECAP1-201ENST00000339754 ERO1AQ96HE7 468 aa11.17□□□□□ -0.62
NECAP1-201ENST00000339754 LRRCC1Q9C099 1032 aa11.17□□□□□ -0.62
NECAP1-201ENST00000339754 NUP62CLQ9H1M0 184 aa11.17□□□□□ -0.62
NECAP1-201ENST00000339754 DTNBO60941 627 aa11.17□□□□□ -0.62
NECAP1-201ENST00000339754 LARGE1O95461 756 aa11.17□□□□□ -0.62
NECAP1-201ENST00000339754 ELF2Q15723 593 aa11.17□□□□□ -0.62
NECAP1-201ENST00000339754 TTC6Q86TZ1 520 aa11.17□□□□□ -0.62
NECAP1-201ENST00000339754 RASEFQ8IZ41 740 aa11.17□□□□□ -0.62
NECAP1-201ENST00000339754 RAD50Q92878 1312 aa11.16□□□□□ -0.62
NECAP1-201ENST00000339754 GJB2P29033 226 aa11.16□□□□□ -0.62
NECAP1-201ENST00000339754 LRRC8AQ8IWT6 810 aa11.16□□□□□ -0.62
NECAP1-201ENST00000339754 CLIP2Q9UDT6 1046 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms