RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 NMRK2Q9NPI5 230 aa19.16■□□□□ 0.66
COMMD4-202ENST00000338995 RNF181Q9P0P0 153 aa19.16■□□□□ 0.66
COMMD4-202ENST00000338995 RBM46Q8TBY0 533 aaKnown RBP19.15■□□□□ 0.66
COMMD4-202ENST00000338995 PER1O15534 1290 aaPredicted RBP19.14■□□□□ 0.65
COMMD4-202ENST00000338995 SERPINB2P05120 415 aa19.14■□□□□ 0.65
COMMD4-202ENST00000338995 CANXP27824 592 aaKnown RBP19.14■□□□□ 0.65
COMMD4-202ENST00000338995 TEFQ10587 303 aa19.14■□□□□ 0.65
COMMD4-202ENST00000338995 NFIXQ14938 502 aa19.14■□□□□ 0.65
COMMD4-202ENST00000338995 GAS2L2Q8NHY3 880 aa19.14■□□□□ 0.65
COMMD4-202ENST00000338995 SCN11AQ9UI33 1791 aa19.14■□□□□ 0.65
COMMD4-202ENST00000338995 CEP350Q5VT06 3117 aa19.14■□□□□ 0.65
COMMD4-202ENST00000338995 U2SURPO15042 1029 aaKnown RBP19.13■□□□□ 0.65
COMMD4-202ENST00000338995 GNAT3A8MTJ3 354 aa19.12■□□□□ 0.65
COMMD4-202ENST00000338995 H0YIN7 160 aa19.12■□□□□ 0.65
COMMD4-202ENST00000338995 FSTL1Q12841 308 aa19.12■□□□□ 0.65
COMMD4-202ENST00000338995 TTLL6Q8N841 843 aa19.12■□□□□ 0.65
COMMD4-202ENST00000338995 PDZRN3Q9UPQ7 1066 aa19.12■□□□□ 0.65
COMMD4-202ENST00000338995 ZBTB1Q9Y2K1 713 aa19.12■□□□□ 0.65
COMMD4-202ENST00000338995 COL15A1P39059 1388 aa19.11■□□□□ 0.65
COMMD4-202ENST00000338995 KIAA1551Q9HCM1 1747 aa19.11■□□□□ 0.65
COMMD4-202ENST00000338995 RRAGCQ9HB90 399 aa19.1■□□□□ 0.65
COMMD4-202ENST00000338995 ZC3H4Q9UPT8 1303 aaKnown RBP19.09■□□□□ 0.65
COMMD4-202ENST00000338995 LMNB1P20700 586 aa19.09■□□□□ 0.65
COMMD4-202ENST00000338995 CNGB1Q14028 1251 aaPredicted RBP19.09■□□□□ 0.65
COMMD4-202ENST00000338995 C2CD5Q86YS7 1000 aa19.09■□□□□ 0.65
COMMD4-202ENST00000338995 CFAP53Q96M91 514 aa19.09■□□□□ 0.65
COMMD4-202ENST00000338995 EIF5P55010 431 aaKnown RBP19.08■□□□□ 0.64
COMMD4-202ENST00000338995 ZNF790Q6PG37 636 aa19.08■□□□□ 0.64
COMMD4-202ENST00000338995 BICDL1Q6ZP65 573 aa19.08■□□□□ 0.64
COMMD4-202ENST00000338995 ARFGEF1Q9Y6D6 1849 aa19.08■□□□□ 0.64
COMMD4-202ENST00000338995 TJP1Q07157 1748 aa19.08■□□□□ 0.64
COMMD4-202ENST00000338995 NPC1L1Q9UHC9 1359 aa19.07■□□□□ 0.64
COMMD4-202ENST00000338995 DNAJC5GQ8N7S2 189 aa19.07■□□□□ 0.64
COMMD4-202ENST00000338995 FMNL2Q96PY5 1086 aa19.07■□□□□ 0.64
COMMD4-202ENST00000338995 BCL2L12Q9HB09 334 aa19.07■□□□□ 0.64
COMMD4-202ENST00000338995 NUDCQ9Y266 331 aa19.07■□□□□ 0.64
COMMD4-202ENST00000338995 BRCA1P38398 1863 aaKnown RBP19.07■□□□□ 0.64
COMMD4-202ENST00000338995 MRC1P22897 1456 aa19.06■□□□□ 0.64
COMMD4-202ENST00000338995 NPHP1O15259 732 aa19.06■□□□□ 0.64
COMMD4-202ENST00000338995 PDE6BP35913 854 aa19.06■□□□□ 0.64
COMMD4-202ENST00000338995 IL17REQ8NFR9 667 aa19.06■□□□□ 0.64
COMMD4-202ENST00000338995 ZNF330Q9Y3S2 320 aaPredicted RBP19.06■□□□□ 0.64
COMMD4-202ENST00000338995 VEGFAP15692 232 aaPredicted RBP19.05■□□□□ 0.64
COMMD4-202ENST00000338995 IL6STP40189 918 aaPredicted RBP19.05■□□□□ 0.64
COMMD4-202ENST00000338995 SMC1BQ8NDV3 1235 aa19.05■□□□□ 0.64
COMMD4-202ENST00000338995 ZNF496Q96IT1 587 aaPredicted RBP19.05■□□□□ 0.64
COMMD4-202ENST00000338995 DPY19L2Q6NUT2 758 aa19.04■□□□□ 0.64
COMMD4-202ENST00000338995 ZNF622Q969S3 477 aaKnown RBP eCLIP19.04■□□□□ 0.64
COMMD4-202ENST00000338995 BRIP1Q9BX63 1249 aa19.04■□□□□ 0.64
COMMD4-202ENST00000338995 HEG1Q9ULI3 1381 aa19.04■□□□□ 0.64
COMMD4-202ENST00000338995 GLTPD2A6NH11 291 aa19.03■□□□□ 0.64
COMMD4-202ENST00000338995 BTBD11A6QL63 1104 aa19.03■□□□□ 0.64
COMMD4-202ENST00000338995 SETDB2Q96T68 719 aa19.03■□□□□ 0.64
COMMD4-202ENST00000338995 TBC1D2BQ9UPU7 963 aa19.03■□□□□ 0.64
COMMD4-202ENST00000338995 KCPQ6ZWJ8 1503 aa19.03■□□□□ 0.64
COMMD4-202ENST00000338995 RASSF7Q02833 373 aa19.02■□□□□ 0.64
COMMD4-202ENST00000338995 TBC1D9BQ66K14 1250 aa19.02■□□□□ 0.64
COMMD4-202ENST00000338995 RTF1Q92541 710 aaKnown RBP19.02■□□□□ 0.64
COMMD4-202ENST00000338995 KLRG1Q96E93 195 aa19.01■□□□□ 0.63
COMMD4-202ENST00000338995 ST5P78524 1137 aa19■□□□□ 0.63
COMMD4-202ENST00000338995 ADAMTS7Q9UKP4 1686 aa18.99■□□□□ 0.63
COMMD4-202ENST00000338995 A1BGP04217 495 aa18.99■□□□□ 0.63
COMMD4-202ENST00000338995 PRKAR2BP31323 418 aa18.99■□□□□ 0.63
COMMD4-202ENST00000338995 CNKSR1Q969H4 720 aa18.99■□□□□ 0.63
COMMD4-202ENST00000338995 CARMIL3Q8ND23 1372 aa18.98■□□□□ 0.63
COMMD4-202ENST00000338995 SOGA3Q5TF21 947 aa18.98■□□□□ 0.63
COMMD4-202ENST00000338995 CNBD1Q8NA66 436 aa18.98■□□□□ 0.63
COMMD4-202ENST00000338995 SBF1O95248 1867 aa18.97■□□□□ 0.63
COMMD4-202ENST00000338995 C21orf2O43822 256 aa18.97■□□□□ 0.63
COMMD4-202ENST00000338995 SNRPA1P09661 255 aaKnown RBP18.97■□□□□ 0.63
COMMD4-202ENST00000338995 U2AF1L5P0DN76 240 aaPredicted RBP18.97■□□□□ 0.63
COMMD4-202ENST00000338995 U2AF1Q01081 240 aaKnown RBP eCLIP18.97■□□□□ 0.63
COMMD4-202ENST00000338995 PRR5LQ6MZQ0 368 aa18.97■□□□□ 0.63
COMMD4-202ENST00000338995 DZIP3Q86Y13 1208 aaKnown RBP18.97■□□□□ 0.63
COMMD4-202ENST00000338995 PHACTR3Q96KR7 559 aa18.97■□□□□ 0.63
COMMD4-202ENST00000338995 ZNF652Q9Y2D9 606 aa18.97■□□□□ 0.63
COMMD4-202ENST00000338995 AFDNP55196 1824 aaKnown RBP18.97■□□□□ 0.63
COMMD4-202ENST00000338995 VIRMAQ69YN4 1812 aaKnown RBP18.96■□□□□ 0.63
COMMD4-202ENST00000338995 ERFEQ4G0M1 354 aa18.96■□□□□ 0.63
COMMD4-202ENST00000338995 CLEC4GQ6UXB4 293 aa18.96■□□□□ 0.63
COMMD4-202ENST00000338995 ZNF219Q9P2Y4 722 aaPredicted RBP18.96■□□□□ 0.63
COMMD4-202ENST00000338995 CEMIPQ8WUJ3 1361 aa18.95■□□□□ 0.62
COMMD4-202ENST00000338995 NFKBIEO00221 500 aa18.95■□□□□ 0.62
COMMD4-202ENST00000338995 CAMTA2O94983 1202 aa18.95■□□□□ 0.62
COMMD4-202ENST00000338995 NEFMP07197 916 aa18.95■□□□□ 0.62
COMMD4-202ENST00000338995 STYK1Q6J9G0 422 aa18.95■□□□□ 0.62
COMMD4-202ENST00000338995 RSPH6AQ9H0K4 717 aa18.95■□□□□ 0.62
COMMD4-202ENST00000338995 NRXN2Q9P2S2 1712 aa18.94■□□□□ 0.62
COMMD4-202ENST00000338995 HTATSF1O43719 755 aaKnown RBP18.94■□□□□ 0.62
COMMD4-202ENST00000338995 HTRA3P83110 453 aa18.94■□□□□ 0.62
COMMD4-202ENST00000338995 JMYQ8N9B5 988 aa18.94■□□□□ 0.62
COMMD4-202ENST00000338995 MASTLQ96GX5 879 aa18.94■□□□□ 0.62
COMMD4-202ENST00000338995 USP16Q9Y5T5 823 aa18.94■□□□□ 0.62
COMMD4-202ENST00000338995 KCNQ3O43525 872 aa18.93■□□□□ 0.62
COMMD4-202ENST00000338995 TPTE2Q6XPS3 522 aa18.93■□□□□ 0.62
COMMD4-202ENST00000338995 NBPF5PQ86XG9 351 aaPredicted RBP18.93■□□□□ 0.62
COMMD4-202ENST00000338995 CCDC24Q8N4L8 307 aa18.93■□□□□ 0.62
COMMD4-202ENST00000338995 TAOK3Q9H2K8 898 aa18.93■□□□□ 0.62
COMMD4-202ENST00000338995 UBR2Q8IWV8 1755 aa18.93■□□□□ 0.62
COMMD4-202ENST00000338995 COL3A1P02461 1466 aaPredicted RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms