RNA–Protein interactions for RNA: ENST00000338176.8

RAB28-203, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAB28, Length 1,787 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-203ENST00000338176 FMNL2Q96PY5 1086 aa27.76■■■□□ 2.03
RAB28-203ENST00000338176 MAPK8IP3Q9UPT6 1336 aa27.76■■■□□ 2.03
RAB28-203ENST00000338176 PRAMEF22A3QJZ6 481 aa27.76■■■□□ 2.03
RAB28-203ENST00000338176 FKBP8Q14318 412 aa27.76■■■□□ 2.03
RAB28-203ENST00000338176 GPR162Q16538 588 aa27.76■■■□□ 2.03
RAB28-203ENST00000338176 CD2APQ9Y5K6 639 aa27.76■■■□□ 2.03
RAB28-203ENST00000338176 CCDC146Q8IYE0 955 aa27.74■■■□□ 2.03
RAB28-203ENST00000338176 COL15A1P39059 1388 aa27.74■■■□□ 2.03
RAB28-203ENST00000338176 WWC3Q9ULE0 1092 aa27.73■■■□□ 2.03
RAB28-203ENST00000338176 STARD3NLO95772 234 aa27.73■■■□□ 2.03
RAB28-203ENST00000338176 USPL1Q5W0Q7 1092 aa27.73■■■□□ 2.03
RAB28-203ENST00000338176 ZNF316A6NFI3 1004 aaPredicted RBP27.71■■■□□ 2.03
RAB28-203ENST00000338176 A1BGP04217 495 aa27.71■■■□□ 2.03
RAB28-203ENST00000338176 YBX3P16989 372 aaKnown RBP eCLIP27.71■■■□□ 2.03
RAB28-203ENST00000338176 YY1P25490 414 aa27.71■■■□□ 2.03
RAB28-203ENST00000338176 TAF7Q15545 349 aaPredicted RBP27.71■■■□□ 2.03
RAB28-203ENST00000338176 PNNQ9H307 717 aaKnown RBP27.71■■■□□ 2.03
RAB28-203ENST00000338176 USP16Q9Y5T5 823 aa27.71■■■□□ 2.03
RAB28-203ENST00000338176 PIP4K2AP48426 406 aaPredicted RBP27.7■■■□□ 2.02
RAB28-203ENST00000338176 RRP7AQ9Y3A4 280 aaKnown RBP27.7■■■□□ 2.02
RAB28-203ENST00000338176 ZPR1O75312 459 aa27.69■■■□□ 2.02
RAB28-203ENST00000338176 DDR1Q08345 913 aa27.69■■■□□ 2.02
RAB28-203ENST00000338176 EIF5P55010 431 aaKnown RBP27.68■■■□□ 2.02
RAB28-203ENST00000338176 TEX13AQ9BXU3 409 aaPredicted RBP27.68■■■□□ 2.02
RAB28-203ENST00000338176 ADAMTS8Q9UP79 889 aa27.68■■■□□ 2.02
RAB28-203ENST00000338176 ZNF330Q9Y3S2 320 aaPredicted RBP27.68■■■□□ 2.02
RAB28-203ENST00000338176 WDR43Q15061 677 aaKnown RBP eCLIP27.68■■■□□ 2.02
RAB28-203ENST00000338176 NARFQ9UHQ1 456 aa27.68■■■□□ 2.02
RAB28-203ENST00000338176 PARP3Q9Y6F1 533 aa27.68■■■□□ 2.02
RAB28-203ENST00000338176 RIPK4P57078 832 aa27.67■■■□□ 2.02
RAB28-203ENST00000338176 BCL2L12Q9HB09 334 aa27.67■■■□□ 2.02
RAB28-203ENST00000338176 TMPOP42166 694 aaKnown RBP27.66■■■□□ 2.02
RAB28-203ENST00000338176 KIF13BQ9NQT8 1826 aa27.65■■■□□ 2.02
RAB28-203ENST00000338176 KDM3BQ7LBC6 1761 aa27.65■■■□□ 2.02
RAB28-203ENST00000338176 NEUROD2Q15784 382 aa27.65■■■□□ 2.02
RAB28-203ENST00000338176 TM4SF1P30408 202 aa27.64■■■□□ 2.02
RAB28-203ENST00000338176 N4BP2Q86UW6 1770 aaPredicted RBP27.64■■■□□ 2.02
RAB28-203ENST00000338176 KIAA1551Q9HCM1 1747 aa27.64■■■□□ 2.02
RAB28-203ENST00000338176 C10orf71Q711Q0 1435 aa27.64■■■□□ 2.01
RAB28-203ENST00000338176 SNRPA1P09661 255 aaKnown RBP27.63■■■□□ 2.01
RAB28-203ENST00000338176 CCDC184Q52MB2 194 aa27.63■■■□□ 2.01
RAB28-203ENST00000338176 TBC1D2BQ9UPU7 963 aa27.63■■■□□ 2.01
RAB28-203ENST00000338176 CHD4Q14839 1912 aa27.62■■■□□ 2.01
RAB28-203ENST00000338176 POLRMTO00411 1230 aaKnown RBP27.62■■■□□ 2.01
RAB28-203ENST00000338176 PXDNLA1KZ92 1463 aa27.62■■■□□ 2.01
RAB28-203ENST00000338176 A0A0G2JLW4 131 aa27.61■■■□□ 2.01
RAB28-203ENST00000338176 NFIXQ14938 502 aa27.61■■■□□ 2.01
RAB28-203ENST00000338176 IL6STP40189 918 aaPredicted RBP27.6■■■□□ 2.01
RAB28-203ENST00000338176 RUNDC1Q96C34 613 aa27.6■■■□□ 2.01
RAB28-203ENST00000338176 NBPF26B4DH59 902 aa27.58■■■□□ 2.01
RAB28-203ENST00000338176 EIF4A1P60842 406 aaKnown RBP27.58■■■□□ 2.01
RAB28-203ENST00000338176 NBPF10Q6P3W6 841 aaKnown RBP27.58■■■□□ 2.01
RAB28-203ENST00000338176 BICDL1Q6ZP65 573 aa27.58■■■□□ 2.01
RAB28-203ENST00000338176 NBPF15Q8N660 670 aa27.58■■■□□ 2.01
RAB28-203ENST00000338176 PNISRQ8TF01 805 aaKnown RBP27.58■■■□□ 2.01
RAB28-203ENST00000338176 A0A087WZG4 1122 aa27.58■■■□□ 2
RAB28-203ENST00000338176 AFDNP55196 1824 aaKnown RBP27.58■■■□□ 2
RAB28-203ENST00000338176 DPEP1P16444 411 aa27.57■■■□□ 2
RAB28-203ENST00000338176 SCN7AQ01118 1682 aa27.57■■■□□ 2
RAB28-203ENST00000338176 TRIM35Q9UPQ4 493 aa27.56■■■□□ 2
RAB28-203ENST00000338176 TBC1D9BQ66K14 1250 aa27.55■■■□□ 2
RAB28-203ENST00000338176 GIGYF1O75420 1035 aaPredicted RBP27.55■■■□□ 2
RAB28-203ENST00000338176 TGFB2P61812 414 aa27.55■■■□□ 2
RAB28-203ENST00000338176 TSPYL4Q9UJ04 414 aa27.55■■■□□ 2
RAB28-203ENST00000338176 LAMB4A4D0S4 1761 aa27.54■■■□□ 2
RAB28-203ENST00000338176 GRIN3BO60391 1043 aa27.54■■■□□ 2
RAB28-203ENST00000338176 CAMTA2O94983 1202 aa27.54■■■□□ 2
RAB28-203ENST00000338176 DZIP3Q86Y13 1208 aaKnown RBP27.53■■■□□ 2
RAB28-203ENST00000338176 SERPINB2P05120 415 aa27.53■■■□□ 2
RAB28-203ENST00000338176 LMOD3Q0VAK6 560 aa27.53■■■□□ 2
RAB28-203ENST00000338176 KCNA3P22001 575 aa27.52■■■□□ 2
RAB28-203ENST00000338176 NRXN2Q9P2S2 1712 aa27.51■■□□□ 1.99
RAB28-203ENST00000338176 CHRNA5P30532 468 aa27.51■■□□□ 1.99
RAB28-203ENST00000338176 NPM2Q86SE8 214 aaKnown RBP27.51■■□□□ 1.99
RAB28-203ENST00000338176 BCORQ6W2J9 1755 aa27.51■■□□□ 1.99
RAB28-203ENST00000338176 BCS1LQ9Y276 419 aa27.5■■□□□ 1.99
RAB28-203ENST00000338176 BRCA1P38398 1863 aaKnown RBP27.49■■□□□ 1.99
RAB28-203ENST00000338176 SENP3-EIF4A1A0A087X0R7 540 aa27.49■■□□□ 1.99
RAB28-203ENST00000338176 NGEFQ8N5V2 710 aa27.49■■□□□ 1.99
RAB28-203ENST00000338176 CARMIL3Q8ND23 1372 aa27.49■■□□□ 1.99
RAB28-203ENST00000338176 APAF1O14727 1248 aa27.48■■□□□ 1.99
RAB28-203ENST00000338176 CCDC24Q8N4L8 307 aa27.48■■□□□ 1.99
RAB28-203ENST00000338176 LAS1LQ9Y4W2 734 aaKnown RBP27.48■■□□□ 1.99
RAB28-203ENST00000338176 ZNF784Q8NCA9 323 aaPredicted RBP27.48■■□□□ 1.99
RAB28-203ENST00000338176 KRT24Q2M2I5 525 aa27.46■■□□□ 1.99
RAB28-203ENST00000338176 ANP32CO43423 234 aa27.45■■□□□ 1.99
RAB28-203ENST00000338176 MYL6BP14649 208 aa27.45■■□□□ 1.98
RAB28-203ENST00000338176 CHL1O00533 1208 aa27.43■■□□□ 1.98
RAB28-203ENST00000338176 EIF2S2P20042 333 aaKnown RBP27.43■■□□□ 1.98
RAB28-203ENST00000338176 HLFQ16534 295 aa27.43■■□□□ 1.98
RAB28-203ENST00000338176 BABAM1Q9NWV8 329 aa27.43■■□□□ 1.98
RAB28-203ENST00000338176 TTLL7Q6ZT98 887 aa27.42■■□□□ 1.98
RAB28-203ENST00000338176 NECTIN2Q92692 538 aa27.42■■□□□ 1.98
RAB28-203ENST00000338176 SETDB2Q96T68 719 aa27.42■■□□□ 1.98
RAB28-203ENST00000338176 PIM2Q9P1W9 311 aa27.42■■□□□ 1.98
RAB28-203ENST00000338176 ANKRD31Q8N7Z5 1873 aa27.42■■□□□ 1.98
RAB28-203ENST00000338176 PRR5LQ6MZQ0 368 aa27.41■■□□□ 1.98
RAB28-203ENST00000338176 MRS2Q9HD23 443 aa27.41■■□□□ 1.98
RAB28-203ENST00000338176 ANXA1P04083 346 aa27.4■■□□□ 1.98
RAB28-203ENST00000338176 PROSER3Q2NL68 480 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms