RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 SLC39A6Q13433 755 aa18.13■□□□□ 0.49
UBA1-201ENST00000335972 ANKARQ7Z5J8 1434 aa18.13■□□□□ 0.49
UBA1-201ENST00000335972 TMX3Q96JJ7 454 aa18.13■□□□□ 0.49
UBA1-201ENST00000335972 RHPN1Q8TCX5 695 aa18.12■□□□□ 0.49
UBA1-201ENST00000335972 DDX54Q8TDD1 881 aaKnown RBP18.12■□□□□ 0.49
UBA1-201ENST00000335972 ANKRD24Q8TF21 1146 aa18.12■□□□□ 0.49
UBA1-201ENST00000335972 JARID2Q92833 1246 aaPredicted RBP18.12■□□□□ 0.49
UBA1-201ENST00000335972 C1orf141Q5JVX7 400 aa18.11■□□□□ 0.49
UBA1-201ENST00000335972 XRN1Q8IZH2 1706 aaKnown RBP18.11■□□□□ 0.49
UBA1-201ENST00000335972 BEND3Q5T5X7 828 aa18.11■□□□□ 0.49
UBA1-201ENST00000335972 MAP3K2Q9Y2U5 619 aa18.11■□□□□ 0.49
UBA1-201ENST00000335972 SSH3Q8TE77 659 aa18.11■□□□□ 0.49
UBA1-201ENST00000335972 CPA1P15085 419 aa18.1■□□□□ 0.49
UBA1-201ENST00000335972 SPG7Q9UQ90 795 aa18.1■□□□□ 0.49
UBA1-201ENST00000335972 MARF1Q9Y4F3 1742 aaKnown RBP18.1■□□□□ 0.49
UBA1-201ENST00000335972 PLEKHO1Q53GL0 409 aaPredicted RBP18.1■□□□□ 0.49
UBA1-201ENST00000335972 CWC27Q6UX04 472 aaKnown RBP18.1■□□□□ 0.49
UBA1-201ENST00000335972 C9orf78Q9NZ63 289 aaPredicted RBP18.1■□□□□ 0.49
UBA1-201ENST00000335972 RNMTO43148 476 aaKnown RBP18.09■□□□□ 0.49
UBA1-201ENST00000335972 NUCB2P80303 420 aa18.09■□□□□ 0.49
UBA1-201ENST00000335972 NSFL1CQ9UNZ2 370 aaKnown RBP18.09■□□□□ 0.49
UBA1-201ENST00000335972 PXDNQ92626 1479 aa18.09■□□□□ 0.49
UBA1-201ENST00000335972 RGPD2P0DJD1 1756 aa18.09■□□□□ 0.49
UBA1-201ENST00000335972 CABLES1Q8TDN4 633 aa18.09■□□□□ 0.49
UBA1-201ENST00000335972 FAM208AQ9UK61 1670 aaKnown RBP18.08■□□□□ 0.49
UBA1-201ENST00000335972 MYL6BP14649 208 aa18.08■□□□□ 0.49
UBA1-201ENST00000335972 CEMIPQ8WUJ3 1361 aa18.08■□□□□ 0.48
UBA1-201ENST00000335972 AKAP4Q5JQC9 854 aa18.08■□□□□ 0.48
UBA1-201ENST00000335972 GDPD2Q9HCC8 539 aa18.08■□□□□ 0.48
UBA1-201ENST00000335972 LMBRD1Q9NUN5 540 aa18.08■□□□□ 0.48
UBA1-201ENST00000335972 SKOR2Q2VWA4 1001 aaPredicted RBP18.07■□□□□ 0.48
UBA1-201ENST00000335972 LTN1O94822 1766 aa18.07■□□□□ 0.48
UBA1-201ENST00000335972 ADCY9O60503 1353 aa18.07■□□□□ 0.48
UBA1-201ENST00000335972 SIL1Q9H173 461 aa18.07■□□□□ 0.48
UBA1-201ENST00000335972 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.07■□□□□ 0.48
UBA1-201ENST00000335972 CYP2E1P05181 493 aaPredicted RBP18.07■□□□□ 0.48
UBA1-201ENST00000335972 MCCP23508 829 aa18.07■□□□□ 0.48
UBA1-201ENST00000335972 KCNH5Q8NCM2 988 aa18.07■□□□□ 0.48
UBA1-201ENST00000335972 KLHDC4Q8TBB5 520 aa18.07■□□□□ 0.48
UBA1-201ENST00000335972 ARHGEF25Q86VW2 580 aa18.06■□□□□ 0.48
UBA1-201ENST00000335972 NLRP2Q9NX02 1062 aa18.06■□□□□ 0.48
UBA1-201ENST00000335972 PROSER2Q86WR7 435 aaPredicted RBP18.06■□□□□ 0.48
UBA1-201ENST00000335972 PI4K2BQ8TCG2 481 aa18.06■□□□□ 0.48
UBA1-201ENST00000335972 STAP2Q9UGK3 403 aa18.06■□□□□ 0.48
UBA1-201ENST00000335972 KRT28Q7Z3Y7 464 aa18.06■□□□□ 0.48
UBA1-201ENST00000335972 POLA2Q14181 598 aa18.05■□□□□ 0.48
UBA1-201ENST00000335972 GPT2Q8TD30 523 aa18.05■□□□□ 0.48
UBA1-201ENST00000335972 GIGYF1O75420 1035 aaPredicted RBP18.05■□□□□ 0.48
UBA1-201ENST00000335972 KLHL40Q2TBA0 621 aa18.05■□□□□ 0.48
UBA1-201ENST00000335972 ERBB4Q15303 1308 aa18.04■□□□□ 0.48
UBA1-201ENST00000335972 LRRC37A3O60309 1634 aa18.04■□□□□ 0.48
UBA1-201ENST00000335972 CHRNA2Q15822 529 aa18.04■□□□□ 0.48
UBA1-201ENST00000335972 RASEFQ8IZ41 740 aa18.04■□□□□ 0.48
UBA1-201ENST00000335972 KIF1BPQ96EK5 621 aa18.04■□□□□ 0.48
UBA1-201ENST00000335972 DBF4Q9UBU7 674 aaPredicted RBP18.04■□□□□ 0.48
UBA1-201ENST00000335972 CCDC8Q9H0W5 538 aaPredicted RBP18.03■□□□□ 0.48
UBA1-201ENST00000335972 ZSCAN23Q3MJ62 389 aa18.02■□□□□ 0.48
UBA1-201ENST00000335972 CWC22Q9HCG8 908 aaKnown RBP18.02■□□□□ 0.48
UBA1-201ENST00000335972 BABAM1Q9NWV8 329 aa18.02■□□□□ 0.48
UBA1-201ENST00000335972 CCDC9Q9Y3X0 531 aaKnown RBP18.02■□□□□ 0.48
UBA1-201ENST00000335972 NFAT5O94916 1531 aa18.02■□□□□ 0.48
UBA1-201ENST00000335972 NASPP49321 788 aaPredicted RBP18.02■□□□□ 0.47
UBA1-201ENST00000335972 TRIM44Q96DX7 344 aaPredicted RBP18.01■□□□□ 0.47
UBA1-201ENST00000335972 SUCLG2Q96I99 432 aa18.01■□□□□ 0.47
UBA1-201ENST00000335972 RAB11FIP3O75154 756 aa18.01■□□□□ 0.47
UBA1-201ENST00000335972 CSB-PGBD3P0DP91 1061 aa18.01■□□□□ 0.47
UBA1-201ENST00000335972 AACSQ86V21 672 aa18.01■□□□□ 0.47
UBA1-201ENST00000335972 NFATC2IPQ8NCF5 419 aa18.01■□□□□ 0.47
UBA1-201ENST00000335972 ADGRL3Q9HAR2 1447 aa18■□□□□ 0.47
UBA1-201ENST00000335972 PRIM1P49642 420 aaKnown RBP18■□□□□ 0.47
UBA1-201ENST00000335972 SYCE3A1L190 88 aa18■□□□□ 0.47
UBA1-201ENST00000335972 TLR7Q9NYK1 1049 aaKnown RBP18■□□□□ 0.47
UBA1-201ENST00000335972 PTH1RQ03431 593 aa17.99■□□□□ 0.47
UBA1-201ENST00000335972 KSR2Q6VAB6 950 aa17.99■□□□□ 0.47
UBA1-201ENST00000335972 CNTROBQ8N137 903 aa17.99■□□□□ 0.47
UBA1-201ENST00000335972 RNF214Q8ND24 703 aa17.99■□□□□ 0.47
UBA1-201ENST00000335972 BICC1Q9H694 974 aaKnown RBP17.99■□□□□ 0.47
UBA1-201ENST00000335972 SGSM2O43147 1006 aa17.99■□□□□ 0.47
UBA1-201ENST00000335972 IFIT2P09913 472 aaKnown RBP17.99■□□□□ 0.47
UBA1-201ENST00000335972 AMOTQ4VCS5 1084 aa17.99■□□□□ 0.47
UBA1-201ENST00000335972 CLEC17AQ6ZS10 378 aa17.99■□□□□ 0.47
UBA1-201ENST00000335972 RIC3Q7Z5B4 369 aa17.99■□□□□ 0.47
UBA1-201ENST00000335972 CLASRPQ8N2M8 674 aaKnown RBP17.99■□□□□ 0.47
UBA1-201ENST00000335972 RBSNQ9H1K0 784 aa17.99■□□□□ 0.47
UBA1-201ENST00000335972 TMEM63CQ9P1W3 806 aa17.99■□□□□ 0.47
UBA1-201ENST00000335972 SNX14Q9Y5W7 946 aa17.99■□□□□ 0.47
UBA1-201ENST00000335972 DIAPH3Q9NSV4 1193 aa17.99■□□□□ 0.47
UBA1-201ENST00000335972 NDUFB9Q9Y6M9 179 aa17.99■□□□□ 0.47
UBA1-201ENST00000335972 COL9A3Q14050 684 aaPredicted RBP17.98■□□□□ 0.47
UBA1-201ENST00000335972 KIAA1211Q6ZU35 1233 aa17.98■□□□□ 0.47
UBA1-201ENST00000335972 HSPA4P34932 840 aa17.98■□□□□ 0.47
UBA1-201ENST00000335972 KAZALD1Q96I82 304 aa17.97■□□□□ 0.47
UBA1-201ENST00000335972 PRPF40BQ6NWY9 871 aaKnown RBP17.97■□□□□ 0.47
UBA1-201ENST00000335972 NAP1L5Q96NT1 182 aaPredicted RBP17.97■□□□□ 0.47
UBA1-201ENST00000335972 LSG1Q9H089 658 aaKnown RBP17.97■□□□□ 0.47
UBA1-201ENST00000335972 PTMSP20962 102 aa17.97■□□□□ 0.47
UBA1-201ENST00000335972 RAPGEF4Q8WZA2 1011 aa17.97■□□□□ 0.47
UBA1-201ENST00000335972 EDC3Q96F86 508 aaKnown RBP17.97■□□□□ 0.47
UBA1-201ENST00000335972 TCEANC2Q96MN5 208 aa17.97■□□□□ 0.47
UBA1-201ENST00000335972 GADD45BO75293 160 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms