RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 ADAMTS8Q9UP79 889 aa19.76■□□□□ 0.75
KATNA1-201ENST00000335643 USP42Q9H9J4 1324 aaKnown RBP19.75■□□□□ 0.75
KATNA1-201ENST00000335643 FMNL2Q96PY5 1086 aa19.75■□□□□ 0.75
KATNA1-201ENST00000335643 MMP10P09238 476 aa19.74■□□□□ 0.75
KATNA1-201ENST00000335643 PNNQ9H307 717 aaKnown RBP19.74■□□□□ 0.75
KATNA1-201ENST00000335643 COL15A1P39059 1388 aa19.74■□□□□ 0.75
KATNA1-201ENST00000335643 CANXP27824 592 aaKnown RBP19.74■□□□□ 0.75
KATNA1-201ENST00000335643 TAF7Q15545 349 aaPredicted RBP19.74■□□□□ 0.75
KATNA1-201ENST00000335643 RRP7AQ9Y3A4 280 aaKnown RBP19.74■□□□□ 0.75
KATNA1-201ENST00000335643 TMPOP42166 694 aaKnown RBP19.73■□□□□ 0.75
KATNA1-201ENST00000335643 FKBP8Q14318 412 aa19.73■□□□□ 0.75
KATNA1-201ENST00000335643 WDR43Q15061 677 aaKnown RBP eCLIP19.73■□□□□ 0.75
KATNA1-201ENST00000335643 USP16Q9Y5T5 823 aa19.73■□□□□ 0.75
KATNA1-201ENST00000335643 KIAA1551Q9HCM1 1747 aa19.73■□□□□ 0.75
KATNA1-201ENST00000335643 KIF13BQ9NQT8 1826 aa19.72■□□□□ 0.75
KATNA1-201ENST00000335643 RIPK4P57078 832 aa19.72■□□□□ 0.75
KATNA1-201ENST00000335643 STARD3NLO95772 234 aa19.71■□□□□ 0.75
KATNA1-201ENST00000335643 A1BGP04217 495 aa19.71■□□□□ 0.75
KATNA1-201ENST00000335643 USPL1Q5W0Q7 1092 aa19.71■□□□□ 0.75
KATNA1-201ENST00000335643 NLGN1Q8N2Q7 840 aa19.71■□□□□ 0.75
KATNA1-201ENST00000335643 LAMB4A4D0S4 1761 aa19.71■□□□□ 0.75
KATNA1-201ENST00000335643 PIP4K2AP48426 406 aaPredicted RBP19.7■□□□□ 0.74
KATNA1-201ENST00000335643 EIF5P55010 431 aaKnown RBP19.7■□□□□ 0.74
KATNA1-201ENST00000335643 RUNDC1Q96C34 613 aa19.7■□□□□ 0.74
KATNA1-201ENST00000335643 BCL2L12Q9HB09 334 aa19.7■□□□□ 0.74
KATNA1-201ENST00000335643 CD2APQ9Y5K6 639 aa19.7■□□□□ 0.74
KATNA1-201ENST00000335643 SCN7AQ01118 1682 aa19.69■□□□□ 0.74
KATNA1-201ENST00000335643 DDR1Q08345 913 aa19.69■□□□□ 0.74
KATNA1-201ENST00000335643 NEUROD2Q15784 382 aa19.69■□□□□ 0.74
KATNA1-201ENST00000335643 TEX13AQ9BXU3 409 aaPredicted RBP19.69■□□□□ 0.74
KATNA1-201ENST00000335643 N4BP2Q86UW6 1770 aaPredicted RBP19.68■□□□□ 0.74
KATNA1-201ENST00000335643 NARFQ9UHQ1 456 aa19.68■□□□□ 0.74
KATNA1-201ENST00000335643 C10orf71Q711Q0 1435 aa19.67■□□□□ 0.74
KATNA1-201ENST00000335643 SNRPA1P09661 255 aaKnown RBP19.67■□□□□ 0.74
KATNA1-201ENST00000335643 TRIM35Q9UPQ4 493 aa19.67■□□□□ 0.74
KATNA1-201ENST00000335643 AFDNP55196 1824 aaKnown RBP19.67■□□□□ 0.74
KATNA1-201ENST00000335643 BCORQ6W2J9 1755 aa19.67■□□□□ 0.74
KATNA1-201ENST00000335643 ZPR1O75312 459 aa19.66■□□□□ 0.74
KATNA1-201ENST00000335643 YBX3P16989 372 aaKnown RBP eCLIP19.66■□□□□ 0.74
KATNA1-201ENST00000335643 ZNF330Q9Y3S2 320 aaPredicted RBP19.66■□□□□ 0.74
KATNA1-201ENST00000335643 TM4SF1P30408 202 aa19.66■□□□□ 0.74
KATNA1-201ENST00000335643 EIF4A1P60842 406 aaKnown RBP19.66■□□□□ 0.74
KATNA1-201ENST00000335643 WWC3Q9ULE0 1092 aa19.66■□□□□ 0.74
KATNA1-201ENST00000335643 PXDNLA1KZ92 1463 aa19.65■□□□□ 0.74
KATNA1-201ENST00000335643 DCAF8L1A6NGE4 600 aa19.65■□□□□ 0.74
KATNA1-201ENST00000335643 IL6STP40189 918 aaPredicted RBP19.65■□□□□ 0.74
KATNA1-201ENST00000335643 PELP1Q8IZL8 1130 aaKnown RBP19.65■□□□□ 0.74
KATNA1-201ENST00000335643 TBC1D2BQ9UPU7 963 aa19.65■□□□□ 0.74
KATNA1-201ENST00000335643 NRXN2Q9P2S2 1712 aa19.64■□□□□ 0.74
KATNA1-201ENST00000335643 NBPF26B4DH59 902 aa19.64■□□□□ 0.73
KATNA1-201ENST00000335643 POLRMTO00411 1230 aaKnown RBP19.64■□□□□ 0.73
KATNA1-201ENST00000335643 GPR162Q16538 588 aa19.64■□□□□ 0.73
KATNA1-201ENST00000335643 NBPF10Q6P3W6 841 aaKnown RBP19.64■□□□□ 0.73
KATNA1-201ENST00000335643 NBPF15Q8N660 670 aa19.64■□□□□ 0.73
KATNA1-201ENST00000335643 PNISRQ8TF01 805 aaKnown RBP19.64■□□□□ 0.73
KATNA1-201ENST00000335643 PARP3Q9Y6F1 533 aa19.64■□□□□ 0.73
KATNA1-201ENST00000335643 GIGYF1O75420 1035 aaPredicted RBP19.63■□□□□ 0.73
KATNA1-201ENST00000335643 NFIXQ14938 502 aa19.63■□□□□ 0.73
KATNA1-201ENST00000335643 TSPYL4Q9UJ04 414 aa19.62■□□□□ 0.73
KATNA1-201ENST00000335643 BRCA1P38398 1863 aaKnown RBP19.62■□□□□ 0.73
KATNA1-201ENST00000335643 APAF1O14727 1248 aa19.61■□□□□ 0.73
KATNA1-201ENST00000335643 ANP32CO43423 234 aa19.61■□□□□ 0.73
KATNA1-201ENST00000335643 LMOD3Q0VAK6 560 aa19.61■□□□□ 0.73
KATNA1-201ENST00000335643 CHD4Q14839 1912 aa19.61■□□□□ 0.73
KATNA1-201ENST00000335643 SENP3-EIF4A1A0A087X0R7 540 aa19.6■□□□□ 0.73
KATNA1-201ENST00000335643 CAMTA2O94983 1202 aa19.6■□□□□ 0.73
KATNA1-201ENST00000335643 A0A087WZG4 1122 aa19.59■□□□□ 0.73
KATNA1-201ENST00000335643 TBC1D9BQ66K14 1250 aa19.59■□□□□ 0.73
KATNA1-201ENST00000335643 A0A0G2JLW4 131 aa19.58■□□□□ 0.73
KATNA1-201ENST00000335643 YY1P25490 414 aa19.58■□□□□ 0.73
KATNA1-201ENST00000335643 BICDL1Q6ZP65 573 aa19.58■□□□□ 0.73
KATNA1-201ENST00000335643 DZIP3Q86Y13 1208 aaKnown RBP19.58■□□□□ 0.73
KATNA1-201ENST00000335643 CARMIL3Q8ND23 1372 aa19.58■□□□□ 0.72
KATNA1-201ENST00000335643 KRT24Q2M2I5 525 aa19.57■□□□□ 0.72
KATNA1-201ENST00000335643 MRS2Q9HD23 443 aa19.57■□□□□ 0.72
KATNA1-201ENST00000335643 CHL1O00533 1208 aa19.57■□□□□ 0.72
KATNA1-201ENST00000335643 DPEP1P16444 411 aa19.57■□□□□ 0.72
KATNA1-201ENST00000335643 KCNA3P22001 575 aa19.57■□□□□ 0.72
KATNA1-201ENST00000335643 ANKRD31Q8N7Z5 1873 aa19.56■□□□□ 0.72
KATNA1-201ENST00000335643 TGFB2P61812 414 aa19.56■□□□□ 0.72
KATNA1-201ENST00000335643 BABAM1Q9NWV8 329 aa19.56■□□□□ 0.72
KATNA1-201ENST00000335643 LAS1LQ9Y4W2 734 aaKnown RBP19.56■□□□□ 0.72
KATNA1-201ENST00000335643 SERPINB2P05120 415 aa19.55■□□□□ 0.72
KATNA1-201ENST00000335643 CHRNA5P30532 468 aa19.53■□□□□ 0.72
KATNA1-201ENST00000335643 NGEFQ8N5V2 710 aa19.53■□□□□ 0.72
KATNA1-201ENST00000335643 DLEC1Q9Y238 1755 aa19.53■□□□□ 0.72
KATNA1-201ENST00000335643 MYL6BP14649 208 aa19.53■□□□□ 0.72
KATNA1-201ENST00000335643 NPM2Q86SE8 214 aaKnown RBP19.53■□□□□ 0.72
KATNA1-201ENST00000335643 CCDC24Q8N4L8 307 aa19.53■□□□□ 0.72
KATNA1-201ENST00000335643 PDIA6Q15084 440 aa19.52■□□□□ 0.71
KATNA1-201ENST00000335643 HLFQ16534 295 aa19.52■□□□□ 0.71
KATNA1-201ENST00000335643 PROSER3Q2NL68 480 aa19.52■□□□□ 0.71
KATNA1-201ENST00000335643 LRP10Q7Z4F1 713 aa19.52■□□□□ 0.71
KATNA1-201ENST00000335643 NUP98P52948 1817 aa19.52■□□□□ 0.71
KATNA1-201ENST00000335643 COL11A2P13942 1736 aaPredicted RBP19.51■□□□□ 0.71
KATNA1-201ENST00000335643 ANXA1P04083 346 aa19.51■□□□□ 0.71
KATNA1-201ENST00000335643 ZNF853P0CG23 659 aa19.51■□□□□ 0.71
KATNA1-201ENST00000335643 EIF2S2P20042 333 aaKnown RBP19.51■□□□□ 0.71
KATNA1-201ENST00000335643 TTLL7Q6ZT98 887 aa19.51■□□□□ 0.71
KATNA1-201ENST00000335643 CFAP44Q96MT7 982 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms