RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 GOLGA6L10A0A0M3HER8 536 aa17.92■□□□□ 0.46
PTPN21-201ENST00000328736 CHMP4BP1P59074 171 aa17.92■□□□□ 0.46
PTPN21-201ENST00000328736 TAF3Q5VWG9 929 aa17.92■□□□□ 0.46
PTPN21-201ENST00000328736 SPDYE4A6NLX3 237 aa17.91■□□□□ 0.46
PTPN21-201ENST00000328736 GCOM1H8Y6P7 765 aaPredicted RBP17.91■□□□□ 0.46
PTPN21-201ENST00000328736 MYZAPP0CAP1 466 aa17.91■□□□□ 0.46
PTPN21-201ENST00000328736 NUDT16Q96DE0 195 aaKnown RBP17.91■□□□□ 0.46
PTPN21-201ENST00000328736 FERMT2Q96AC1 680 aa17.91■□□□□ 0.46
PTPN21-201ENST00000328736 KIF5CO60282 957 aa17.91■□□□□ 0.46
PTPN21-201ENST00000328736 UBXN4Q92575 508 aa17.91■□□□□ 0.46
PTPN21-201ENST00000328736 AMOTQ4VCS5 1084 aa17.9■□□□□ 0.46
PTPN21-201ENST00000328736 HOOK3Q86VS8 718 aa17.9■□□□□ 0.46
PTPN21-201ENST00000328736 EPRSP07814 1512 aaKnown RBP17.9■□□□□ 0.46
PTPN21-201ENST00000328736 A0A087WZG4 1122 aa17.9■□□□□ 0.46
PTPN21-201ENST00000328736 PLEKHH1Q9ULM0 1364 aa17.9■□□□□ 0.46
PTPN21-201ENST00000328736 UQCRHLA0A096LP55 91 aa17.9■□□□□ 0.46
PTPN21-201ENST00000328736 UQCRHP07919 91 aa17.9■□□□□ 0.46
PTPN21-201ENST00000328736 CASQ1P31415 396 aa17.9■□□□□ 0.46
PTPN21-201ENST00000328736 SHTN1A0MZ66 631 aa17.9■□□□□ 0.46
PTPN21-201ENST00000328736 SSRP1Q08945 709 aaKnown RBP17.9■□□□□ 0.46
PTPN21-201ENST00000328736 MYD88Q99836 296 aa17.9■□□□□ 0.46
PTPN21-201ENST00000328736 IFIT5Q13325 482 aaKnown RBP17.89■□□□□ 0.46
PTPN21-201ENST00000328736 CCDC178Q5BJE1 867 aa17.89■□□□□ 0.46
PTPN21-201ENST00000328736 SLC12A7Q9Y666 1083 aa17.89■□□□□ 0.46
PTPN21-201ENST00000328736 NAIPQ13075 1403 aa17.89■□□□□ 0.46
PTPN21-201ENST00000328736 MX1P20591 662 aa17.89■□□□□ 0.45
PTPN21-201ENST00000328736 CETN1Q12798 172 aa17.89■□□□□ 0.45
PTPN21-201ENST00000328736 SH2B1Q9NRF2 756 aaPredicted RBP17.89■□□□□ 0.45
PTPN21-201ENST00000328736 USO1O60763 962 aaKnown RBP17.89■□□□□ 0.45
PTPN21-201ENST00000328736 GSTTP1A0A1W2PQM5 241 aa17.89■□□□□ 0.45
PTPN21-201ENST00000328736 SFPQP23246 707 aaKnown RBP eCLIP17.89■□□□□ 0.45
PTPN21-201ENST00000328736 LUZP1Q86V48 1076 aa17.89■□□□□ 0.45
PTPN21-201ENST00000328736 CCDC12Q8WUD4 166 aaPredicted RBP17.89■□□□□ 0.45
PTPN21-201ENST00000328736 DUSP27Q5VZP5 1158 aa17.88■□□□□ 0.45
PTPN21-201ENST00000328736 PTPN23Q9H3S7 1636 aa17.88■□□□□ 0.45
PTPN21-201ENST00000328736 NME9Q86XW9 330 aa17.88■□□□□ 0.45
PTPN21-201ENST00000328736 C8orf76Q96K31 380 aa17.88■□□□□ 0.45
PTPN21-201ENST00000328736 CCDC113Q9H0I3 377 aa17.88■□□□□ 0.45
PTPN21-201ENST00000328736 DRC1Q96MC2 740 aa17.88■□□□□ 0.45
PTPN21-201ENST00000328736 CAMSAP2Q08AD1 1489 aa17.88■□□□□ 0.45
PTPN21-201ENST00000328736 NF2P35240 595 aa17.88■□□□□ 0.45
PTPN21-201ENST00000328736 PDCL2Q8N4E4 241 aa17.88■□□□□ 0.45
PTPN21-201ENST00000328736 SCAND2PQ9GZW5 306 aaPredicted RBP17.88■□□□□ 0.45
PTPN21-201ENST00000328736 RANBP6O60518 1105 aaKnown RBP17.88■□□□□ 0.45
PTPN21-201ENST00000328736 STXBP4Q6ZWJ1 553 aa17.88■□□□□ 0.45
PTPN21-201ENST00000328736 CCDC194A0A1B0GVG4 234 aa17.87■□□□□ 0.45
PTPN21-201ENST00000328736 F6X3S4 739 aa17.87■□□□□ 0.45
PTPN21-201ENST00000328736 WDR78Q5VTH9 848 aa17.87■□□□□ 0.45
PTPN21-201ENST00000328736 CCDC83Q8IWF9 413 aa17.87■□□□□ 0.45
PTPN21-201ENST00000328736 MPHOSPH6Q99547 160 aaKnown RBP17.87■□□□□ 0.45
PTPN21-201ENST00000328736 ANKRD18BA2A2Z9 1011 aa17.87■□□□□ 0.45
PTPN21-201ENST00000328736 IFFO1Q0D2I5 559 aa17.87■□□□□ 0.45
PTPN21-201ENST00000328736 CAMK4Q16566 473 aa17.87■□□□□ 0.45
PTPN21-201ENST00000328736 PRPF40BQ6NWY9 871 aaKnown RBP17.87■□□□□ 0.45
PTPN21-201ENST00000328736 TMCO3Q6UWJ1 677 aa17.87■□□□□ 0.45
PTPN21-201ENST00000328736 TAOK3Q9H2K8 898 aa17.87■□□□□ 0.45
PTPN21-201ENST00000328736 ZNF213O14771 459 aa17.87■□□□□ 0.45
PTPN21-201ENST00000328736 CTNNBL1Q8WYA6 563 aaPredicted RBP17.87■□□□□ 0.45
PTPN21-201ENST00000328736 LARP6Q9BRS8 491 aaKnown RBP17.87■□□□□ 0.45
PTPN21-201ENST00000328736 CTAGE5O15320 804 aa17.86■□□□□ 0.45
PTPN21-201ENST00000328736 NLRP5P59047 1200 aa17.86■□□□□ 0.45
PTPN21-201ENST00000328736 CATIPQ7Z7H3 387 aa17.86■□□□□ 0.45
PTPN21-201ENST00000328736 TTC21AQ8NDW8 1320 aa17.86■□□□□ 0.45
PTPN21-201ENST00000328736 AMPD3Q01432 767 aa17.86■□□□□ 0.45
PTPN21-201ENST00000328736 PAXIP1Q6ZW49 1069 aaPredicted RBP17.86■□□□□ 0.45
PTPN21-201ENST00000328736 CTNNA2P26232 953 aa17.86■□□□□ 0.45
PTPN21-201ENST00000328736 TOP1P11387 765 aaKnown RBP17.86■□□□□ 0.45
PTPN21-201ENST00000328736 SMC1AQ14683 1233 aaKnown RBP17.86■□□□□ 0.45
PTPN21-201ENST00000328736 GOPCQ9HD26 462 aa17.86■□□□□ 0.45
PTPN21-201ENST00000328736 YEATS4O95619 227 aa17.85■□□□□ 0.45
PTPN21-201ENST00000328736 GRIPAP1Q4V328 841 aa17.85■□□□□ 0.45
PTPN21-201ENST00000328736 FERMT1Q9BQL6 677 aa17.85■□□□□ 0.45
PTPN21-201ENST00000328736 EMILIN1Q9Y6C2 1016 aa17.85■□□□□ 0.45
PTPN21-201ENST00000328736 TAF7Q15545 349 aaPredicted RBP17.85■□□□□ 0.45
PTPN21-201ENST00000328736 KLHL10Q6JEL2 608 aa17.85■□□□□ 0.45
PTPN21-201ENST00000328736 PPM1EQ8WY54 764 aa17.85■□□□□ 0.45
PTPN21-201ENST00000328736 PYM1Q9BRP8 204 aaKnown RBP17.85■□□□□ 0.45
PTPN21-201ENST00000328736 PAFAH1B1P43034 410 aa17.85■□□□□ 0.45
PTPN21-201ENST00000328736 CALML4Q96GE6 196 aa17.85■□□□□ 0.45
PTPN21-201ENST00000328736 TRMT112Q9UI30 125 aaKnown RBP17.85■□□□□ 0.45
PTPN21-201ENST00000328736 PABPN1LA6NDY0 278 aaKnown RBP17.84■□□□□ 0.45
PTPN21-201ENST00000328736 GOLGA8AA7E2F4 631 aa17.84■□□□□ 0.45
PTPN21-201ENST00000328736 GOLGA8BA8MQT2 603 aa17.84■□□□□ 0.45
PTPN21-201ENST00000328736 CCDC183Q5T5S1 534 aa17.84■□□□□ 0.45
PTPN21-201ENST00000328736 PTCD1O75127 700 aaKnown RBP17.84■□□□□ 0.45
PTPN21-201ENST00000328736 PTPN14Q15678 1187 aa17.84■□□□□ 0.45
PTPN21-201ENST00000328736 SSH1Q8WYL5 1049 aa17.84■□□□□ 0.45
PTPN21-201ENST00000328736 COMMD10Q9Y6G5 202 aa17.84■□□□□ 0.45
PTPN21-201ENST00000328736 CCDC61Q9Y6R9 512 aa17.84■□□□□ 0.45
PTPN21-201ENST00000328736 TTF1Q15361 905 aaPredicted RBP17.84■□□□□ 0.45
PTPN21-201ENST00000328736 FEZ1Q99689 392 aa17.84■□□□□ 0.45
PTPN21-201ENST00000328736 ALDH1L2Q3SY69 923 aa17.83■□□□□ 0.45
PTPN21-201ENST00000328736 NUP88Q99567 741 aaPredicted RBP17.83■□□□□ 0.45
PTPN21-201ENST00000328736 BOLA2Q9H3K6 86 aa17.83■□□□□ 0.45
PTPN21-201ENST00000328736 LDHCP07864 332 aa17.83■□□□□ 0.45
PTPN21-201ENST00000328736 GIGYF2Q6Y7W6 1299 aaKnown RBP17.83■□□□□ 0.45
PTPN21-201ENST00000328736 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.83■□□□□ 0.45
PTPN21-201ENST00000328736 KIF5BP33176 963 aa17.83■□□□□ 0.44
PTPN21-201ENST00000328736 FAM114A1Q8IWE2 563 aa17.83■□□□□ 0.44
PTPN21-201ENST00000328736 ALS2CR12Q96Q35 445 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms