RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 DUSP27Q5VZP5 1158 aa6.6□□□□□ -1.35
LRIT3-201ENST00000327908 LGR6Q9HBX8 967 aa6.6□□□□□ -1.35
LRIT3-201ENST00000327908 RRP7AQ9Y3A4 280 aaKnown RBP6.6□□□□□ -1.35
LRIT3-201ENST00000327908 LAS1LQ9Y4W2 734 aaKnown RBP6.6□□□□□ -1.35
LRIT3-201ENST00000327908 GIGYF1O75420 1035 aaPredicted RBP6.59□□□□□ -1.35
LRIT3-201ENST00000327908 RPS6KA4O75676 772 aa6.59□□□□□ -1.35
LRIT3-201ENST00000327908 ATP6V1AP38606 617 aa6.59□□□□□ -1.35
LRIT3-201ENST00000327908 RBM42Q9BTD8 480 aaKnown RBP6.59□□□□□ -1.35
LRIT3-201ENST00000327908 RTCBQ9Y3I0 505 aaKnown RBP6.59□□□□□ -1.35
LRIT3-201ENST00000327908 COL5A3P25940 1745 aaPredicted RBP6.59□□□□□ -1.35
LRIT3-201ENST00000327908 TRIM37O94972 964 aa6.59□□□□□ -1.36
LRIT3-201ENST00000327908 NEXNQ0ZGT2 675 aa6.59□□□□□ -1.36
LRIT3-201ENST00000327908 TXNRD1Q16881 649 aa6.59□□□□□ -1.36
LRIT3-201ENST00000327908 CLEC4GQ6UXB4 293 aa6.59□□□□□ -1.36
LRIT3-201ENST00000327908 TJP1Q07157 1748 aa6.58□□□□□ -1.36
LRIT3-201ENST00000327908 PARP10Q53GL7 1025 aa6.58□□□□□ -1.36
LRIT3-201ENST00000327908 ERICH6BQ5W0A0 696 aa6.58□□□□□ -1.36
LRIT3-201ENST00000327908 ACSBG1Q96GR2 724 aa6.58□□□□□ -1.36
LRIT3-201ENST00000327908 NYXQ9GZU5 481 aa6.58□□□□□ -1.36
LRIT3-201ENST00000327908 C4BP0C0L5 1744 aa6.58□□□□□ -1.36
LRIT3-201ENST00000327908 CANXP27824 592 aaKnown RBP6.57□□□□□ -1.36
LRIT3-201ENST00000327908 ZNF496Q96IT1 587 aaPredicted RBP6.57□□□□□ -1.36
LRIT3-201ENST00000327908 RIC1Q4ADV7 1423 aa6.57□□□□□ -1.36
LRIT3-201ENST00000327908 ALDH1L1O75891 902 aa6.57□□□□□ -1.36
LRIT3-201ENST00000327908 CCT4P50991 539 aaKnown RBP6.57□□□□□ -1.36
LRIT3-201ENST00000327908 CAMKK2Q96RR4 588 aa6.57□□□□□ -1.36
LRIT3-201ENST00000327908 NEFLP07196 543 aa6.57□□□□□ -1.36
LRIT3-201ENST00000327908 CYP19A1P11511 503 aaPredicted RBP6.57□□□□□ -1.36
LRIT3-201ENST00000327908 EXOSC9Q06265 439 aaKnown RBP6.57□□□□□ -1.36
LRIT3-201ENST00000327908 UPF1Q92900 1129 aaKnown RBP eCLIP6.57□□□□□ -1.36
LRIT3-201ENST00000327908 ZPR1O75312 459 aa6.56□□□□□ -1.36
LRIT3-201ENST00000327908 PDE3AQ14432 1141 aa6.56□□□□□ -1.36
LRIT3-201ENST00000327908 TRAPPC3LQ5T215 181 aa6.56□□□□□ -1.36
LRIT3-201ENST00000327908 NLGN1Q8N2Q7 840 aa6.56□□□□□ -1.36
LRIT3-201ENST00000327908 RCAN3Q9UKA8 241 aa6.56□□□□□ -1.36
LRIT3-201ENST00000327908 NUP188Q5SRE5 1749 aa6.56□□□□□ -1.36
LRIT3-201ENST00000327908 ZKSCAN2Q63HK3 967 aa6.56□□□□□ -1.36
LRIT3-201ENST00000327908 PLBD2Q8NHP8 589 aa6.56□□□□□ -1.36
LRIT3-201ENST00000327908 SMC4Q9NTJ3 1288 aa6.56□□□□□ -1.36
LRIT3-201ENST00000327908 ASAP1Q9ULH1 1129 aa6.56□□□□□ -1.36
LRIT3-201ENST00000327908 TAF1LQ8IZX4 1826 aa6.56□□□□□ -1.36
LRIT3-201ENST00000327908 VAMP4O75379 141 aa6.56□□□□□ -1.36
LRIT3-201ENST00000327908 DCTN1Q14203 1278 aa6.56□□□□□ -1.36
LRIT3-201ENST00000327908 COL15A1P39059 1388 aa6.55□□□□□ -1.36
LRIT3-201ENST00000327908 SCN7AQ01118 1682 aa6.55□□□□□ -1.36
LRIT3-201ENST00000327908 CRKLP46109 303 aaKnown RBP6.55□□□□□ -1.36
LRIT3-201ENST00000327908 TRIM28Q13263 835 aaKnown RBP6.55□□□□□ -1.36
LRIT3-201ENST00000327908 NARFQ9UHQ1 456 aa6.55□□□□□ -1.36
LRIT3-201ENST00000327908 RFC4P35249 363 aa6.55□□□□□ -1.36
LRIT3-201ENST00000327908 PPP1R42Q7Z4L9 355 aa6.55□□□□□ -1.36
LRIT3-201ENST00000327908 DNAJC10Q8IXB1 793 aa6.55□□□□□ -1.36
LRIT3-201ENST00000327908 MAP3K15Q6ZN16 1313 aa6.55□□□□□ -1.36
LRIT3-201ENST00000327908 N4BP2Q86UW6 1770 aaPredicted RBP6.55□□□□□ -1.36
LRIT3-201ENST00000327908 SOCS7O14512 581 aa6.55□□□□□ -1.36
LRIT3-201ENST00000327908 PTCD1O75127 700 aaKnown RBP6.55□□□□□ -1.36
LRIT3-201ENST00000327908 POLD1P28340 1107 aa6.55□□□□□ -1.36
LRIT3-201ENST00000327908 EIF5P55010 431 aaKnown RBP6.55□□□□□ -1.36
LRIT3-201ENST00000327908 GRIPAP1Q4V328 841 aa6.55□□□□□ -1.36
LRIT3-201ENST00000327908 SLC15A2Q16348 729 aa6.54□□□□□ -1.36
LRIT3-201ENST00000327908 KSR2Q6VAB6 950 aa6.54□□□□□ -1.36
LRIT3-201ENST00000327908 BCORQ6W2J9 1755 aa6.54□□□□□ -1.36
LRIT3-201ENST00000327908 GNAI3P08754 354 aa6.54□□□□□ -1.36
LRIT3-201ENST00000327908 AKT1S1Q96B36 256 aa6.54□□□□□ -1.36
LRIT3-201ENST00000327908 THUMPD2Q9BTF0 503 aaKnown RBP6.54□□□□□ -1.36
LRIT3-201ENST00000327908 GNPATO15228 680 aa6.54□□□□□ -1.36
LRIT3-201ENST00000327908 RARSP54136 660 aaKnown RBP6.54□□□□□ -1.36
LRIT3-201ENST00000327908 SLC39A6Q13433 755 aa6.54□□□□□ -1.36
LRIT3-201ENST00000327908 TMC4Q7Z404 712 aa6.54□□□□□ -1.36
LRIT3-201ENST00000327908 FTSJ3Q8IY81 847 aaKnown RBP6.54□□□□□ -1.36
LRIT3-201ENST00000327908 TFCP2L1Q9NZI6 479 aa6.54□□□□□ -1.36
LRIT3-201ENST00000327908 KCNQ2O43526 872 aa6.53□□□□□ -1.36
LRIT3-201ENST00000327908 RIC3Q7Z5B4 369 aa6.53□□□□□ -1.36
LRIT3-201ENST00000327908 MRPL50Q8N5N7 158 aaKnown RBP6.53□□□□□ -1.36
LRIT3-201ENST00000327908 CCDC191Q8NCU4 936 aa6.53□□□□□ -1.36
LRIT3-201ENST00000327908 DZIP3Q86Y13 1208 aaKnown RBP6.53□□□□□ -1.36
LRIT3-201ENST00000327908 CARMIL3Q8ND23 1372 aa6.53□□□□□ -1.36
LRIT3-201ENST00000327908 EIF2S2P20042 333 aaKnown RBP6.53□□□□□ -1.36
LRIT3-201ENST00000327908 FLIIQ13045 1269 aa6.53□□□□□ -1.36
LRIT3-201ENST00000327908 ANKRD13DQ6ZTN6 518 aa6.53□□□□□ -1.36
LRIT3-201ENST00000327908 C8orf58Q8NAV2 365 aa6.53□□□□□ -1.36
LRIT3-201ENST00000327908 LINS1Q8NG48 757 aa6.53□□□□□ -1.36
LRIT3-201ENST00000327908 DNAAF4Q8WXU2 420 aa6.53□□□□□ -1.36
LRIT3-201ENST00000327908 TSR2Q969E8 191 aaKnown RBP6.53□□□□□ -1.36
LRIT3-201ENST00000327908 DDX19BQ9UMR2 479 aa6.53□□□□□ -1.36
LRIT3-201ENST00000327908 SALL2Q9Y467 1007 aaPredicted RBP6.53□□□□□ -1.36
LRIT3-201ENST00000327908 ST5P78524 1137 aa6.52□□□□□ -1.37
LRIT3-201ENST00000327908 FKBP5Q13451 457 aaPredicted RBP6.52□□□□□ -1.37
LRIT3-201ENST00000327908 GIGYF2Q6Y7W6 1299 aaKnown RBP6.52□□□□□ -1.37
LRIT3-201ENST00000327908 LINC00116Q8NCU8 138 aa6.52□□□□□ -1.37
LRIT3-201ENST00000327908 METTL22Q9BUU2 404 aaPredicted RBP6.52□□□□□ -1.37
LRIT3-201ENST00000327908 USP42Q9H9J4 1324 aaKnown RBP6.52□□□□□ -1.37
LRIT3-201ENST00000327908 ANKRD36CQ5JPF3 1778 aa6.52□□□□□ -1.37
LRIT3-201ENST00000327908 SLC4A2P04920 1241 aa6.52□□□□□ -1.37
LRIT3-201ENST00000327908 INTS5Q6P9B9 1019 aaKnown RBP6.52□□□□□ -1.37
LRIT3-201ENST00000327908 ATF7IPQ6VMQ6 1270 aa6.52□□□□□ -1.37
LRIT3-201ENST00000327908 UBR3Q6ZT12 1888 aa6.52□□□□□ -1.37
LRIT3-201ENST00000327908 CDHR2Q9BYE9 1310 aa6.52□□□□□ -1.37
LRIT3-201ENST00000327908 TCIRG1Q13488 830 aa6.52□□□□□ -1.37
LRIT3-201ENST00000327908 ITPK1Q13572 414 aa6.52□□□□□ -1.37
LRIT3-201ENST00000327908 SRCIN1Q9C0H9 1055 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms