RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 JCADQ9P266 1359 aa9.37□□□□□ -0.91
IFT88-201ENST00000319980 NBPF7P0C2Y1 421 aaPredicted RBP9.37□□□□□ -0.91
IFT88-201ENST00000319980 PHKG2P15735 406 aa9.37□□□□□ -0.91
IFT88-201ENST00000319980 PROSER3Q2NL68 480 aa9.37□□□□□ -0.91
IFT88-201ENST00000319980 BEND3Q5T5X7 828 aa9.36□□□□□ -0.91
IFT88-201ENST00000319980 ZNF790Q6PG37 636 aa9.36□□□□□ -0.91
IFT88-201ENST00000319980 IFNL2Q8IZJ0 200 aa9.36□□□□□ -0.91
IFT88-201ENST00000319980 LRRCC1Q9C099 1032 aa9.36□□□□□ -0.91
IFT88-201ENST00000319980 SPATA31A6Q5VVP1 1343 aa9.36□□□□□ -0.91
IFT88-201ENST00000319980 SDSP20132 328 aa9.36□□□□□ -0.91
IFT88-201ENST00000319980 SLC52A2Q9HAB3 445 aa9.36□□□□□ -0.91
IFT88-201ENST00000319980 PRDM11Q9NQV5 511 aa9.36□□□□□ -0.91
IFT88-201ENST00000319980 ALS2Q96Q42 1657 aa9.36□□□□□ -0.91
IFT88-201ENST00000319980 DEKP35659 375 aaKnown RBP9.35□□□□□ -0.91
IFT88-201ENST00000319980 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.35□□□□□ -0.919e-7■■■■□ 22.8
IFT88-201ENST00000319980 FAM208AQ9UK61 1670 aaKnown RBP9.35□□□□□ -0.91
IFT88-201ENST00000319980 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.35□□□□□ -0.91
IFT88-201ENST00000319980 CYP27B1O15528 508 aa9.35□□□□□ -0.91
IFT88-201ENST00000319980 PDE1AP54750 535 aa9.35□□□□□ -0.91
IFT88-201ENST00000319980 TSHZ3Q63HK5 1081 aa9.35□□□□□ -0.91
IFT88-201ENST00000319980 PPP1R42Q7Z4L9 355 aa9.35□□□□□ -0.91
IFT88-201ENST00000319980 MAP3K2Q9Y2U5 619 aa9.35□□□□□ -0.91
IFT88-201ENST00000319980 HEG1Q9ULI3 1381 aa9.35□□□□□ -0.91
IFT88-201ENST00000319980 MEGF6O75095 1541 aa9.35□□□□□ -0.91
IFT88-201ENST00000319980 AIMP1Q12904 312 aaKnown RBP9.35□□□□□ -0.91
IFT88-201ENST00000319980 OVOS2A0A0G2JMS6 1433 aa9.35□□□□□ -0.91
IFT88-201ENST00000319980 ADCY9O60503 1353 aa9.34□□□□□ -0.91
IFT88-201ENST00000319980 LMO7Q8WWI1 1683 aa9.34□□□□□ -0.91
IFT88-201ENST00000319980 SRGAP3O43295 1099 aa9.34□□□□□ -0.91
IFT88-201ENST00000319980 FRAT2O75474 233 aaPredicted RBP9.34□□□□□ -0.91
IFT88-201ENST00000319980 PXDNLA1KZ92 1463 aa9.34□□□□□ -0.91
IFT88-201ENST00000319980 SURF6O75683 361 aaKnown RBP9.34□□□□□ -0.91
IFT88-201ENST00000319980 KSR2Q6VAB6 950 aa9.34□□□□□ -0.91
IFT88-201ENST00000319980 TOM1L2Q6ZVM7 507 aa9.34□□□□□ -0.91
IFT88-201ENST00000319980 HSCBQ8IWL3 235 aa9.34□□□□□ -0.91
IFT88-201ENST00000319980 SSH3Q8TE77 659 aa9.34□□□□□ -0.91
IFT88-201ENST00000319980 DCAF5Q96JK2 942 aa9.34□□□□□ -0.91
IFT88-201ENST00000319980 HYPKQ9NX55 129 aa9.34□□□□□ -0.91
IFT88-201ENST00000319980 IBTKQ9P2D0 1353 aaPredicted RBP9.34□□□□□ -0.92
IFT88-201ENST00000319980 KDM6AO15550 1401 aaPredicted RBP9.33□□□□□ -0.92
IFT88-201ENST00000319980 CASC1Q6TDU7 716 aa9.33□□□□□ -0.92
IFT88-201ENST00000319980 ZNF496Q96IT1 587 aaPredicted RBP9.33□□□□□ -0.92
IFT88-201ENST00000319980 KIF2CQ99661 725 aa9.33□□□□□ -0.92
IFT88-201ENST00000319980 OSBPL3Q9H4L5 887 aa9.33□□□□□ -0.92
IFT88-201ENST00000319980 ANTXR1Q9H6X2 564 aa9.33□□□□□ -0.92
IFT88-201ENST00000319980 IL1RAPL2Q9NP60 686 aa9.33□□□□□ -0.92
IFT88-201ENST00000319980 C9orf78Q9NZ63 289 aaPredicted RBP9.33□□□□□ -0.92
IFT88-201ENST00000319980 CPDO75976 1380 aa9.33□□□□□ -0.92
IFT88-201ENST00000319980 MYL6BP14649 208 aa9.33□□□□□ -0.92
IFT88-201ENST00000319980 CWF19L2Q2TBE0 894 aaKnown RBP9.33□□□□□ -0.92
IFT88-201ENST00000319980 DDX21Q9NR30 783 aaKnown RBP eCLIP9.33□□□□□ -0.92
IFT88-201ENST00000319980 SOS2Q07890 1332 aaPredicted RBP9.33□□□□□ -0.92
IFT88-201ENST00000319980 RGPD5Q99666 1765 aa9.33□□□□□ -0.92
IFT88-201ENST00000319980 MX1P20591 662 aa9.33□□□□□ -0.92
IFT88-201ENST00000319980 PIP4K2BP78356 416 aa9.33□□□□□ -0.92
IFT88-201ENST00000319980 TTC5Q8N0Z6 440 aa9.33□□□□□ -0.92
IFT88-201ENST00000319980 PDIA6Q15084 440 aa9.32□□□□□ -0.92
IFT88-201ENST00000319980 RBM42Q9BTD8 480 aaKnown RBP9.32□□□□□ -0.92
IFT88-201ENST00000319980 LRP6O75581 1613 aa9.32□□□□□ -0.92
IFT88-201ENST00000319980 KDM3BQ7LBC6 1761 aa9.32□□□□□ -0.92
IFT88-201ENST00000319980 CAMTA1Q9Y6Y1 1673 aa9.32□□□□□ -0.92
IFT88-201ENST00000319980 DDX58O95786 925 aaKnown RBP9.32□□□□□ -0.92
IFT88-201ENST00000319980 CABP4P57796 275 aa9.32□□□□□ -0.92
IFT88-201ENST00000319980 POLA2Q14181 598 aa9.31□□□□□ -0.92
IFT88-201ENST00000319980 RGS17Q9UGC6 210 aaPredicted RBP9.31□□□□□ -0.92
IFT88-201ENST00000319980 USP16Q9Y5T5 823 aa9.31□□□□□ -0.92
IFT88-201ENST00000319980 EIF5BO60841 1220 aaKnown RBP9.31□□□□□ -0.92
IFT88-201ENST00000319980 HSP90AB1P08238 724 aaKnown RBP9.31□□□□□ -0.92
IFT88-201ENST00000319980 PIP4K2AP48426 406 aaPredicted RBP9.31□□□□□ -0.92
IFT88-201ENST00000319980 RIC3Q7Z5B4 369 aa9.31□□□□□ -0.92
IFT88-201ENST00000319980 STRN4Q9NRL3 753 aa9.31□□□□□ -0.92
IFT88-201ENST00000319980 WDR17Q8IZU2 1322 aa9.31□□□□□ -0.92
IFT88-201ENST00000319980 SALL3Q9BXA9 1300 aa9.31□□□□□ -0.92
IFT88-201ENST00000319980 TRIM6-TRIM34B2RNG4 842 aa9.3□□□□□ -0.92
IFT88-201ENST00000319980 ALDH1L1O75891 902 aa9.3□□□□□ -0.92
IFT88-201ENST00000319980 SNRPA1P09661 255 aaKnown RBP9.3□□□□□ -0.92
IFT88-201ENST00000319980 NUTM1Q86Y26 1132 aa9.3□□□□□ -0.92
IFT88-201ENST00000319980 LINS1Q8NG48 757 aa9.3□□□□□ -0.92
IFT88-201ENST00000319980 RHPN1Q8TCX5 695 aa9.3□□□□□ -0.92
IFT88-201ENST00000319980 SNX21Q969T3 373 aa9.3□□□□□ -0.92
IFT88-201ENST00000319980 RILPL2Q969X0 211 aa9.3□□□□□ -0.92
IFT88-201ENST00000319980 USP26Q9BXU7 913 aa9.3□□□□□ -0.92
IFT88-201ENST00000319980 CACNA1FO60840 1977 aa9.3□□□□□ -0.92
IFT88-201ENST00000319980 RAB11FIP3O75154 756 aa9.3□□□□□ -0.92
IFT88-201ENST00000319980 CD2BP2O95400 341 aaKnown RBP9.3□□□□□ -0.92
IFT88-201ENST00000319980 COPS6Q7L5N1 327 aa9.3□□□□□ -0.92
IFT88-201ENST00000319980 ZCRB1Q8TBF4 217 aaKnown RBP9.3□□□□□ -0.92
IFT88-201ENST00000319980 EVA1CP58658 441 aa9.3□□□□□ -0.92
IFT88-201ENST00000319980 XAGE3Q8WTP9 111 aa9.3□□□□□ -0.92
IFT88-201ENST00000319980 FMNL2Q96PY5 1086 aa9.3□□□□□ -0.92
IFT88-201ENST00000319980 COL18A1P39060 1754 aa9.29□□□□□ -0.92
IFT88-201ENST00000319980 ABCA3Q99758 1704 aa9.29□□□□□ -0.92
IFT88-201ENST00000319980 GRM8O00222 908 aa9.29□□□□□ -0.92
IFT88-201ENST00000319980 REC8O95072 547 aa9.29□□□□□ -0.92
IFT88-201ENST00000319980 OS9Q13438 667 aaPredicted RBP9.29□□□□□ -0.92
IFT88-201ENST00000319980 DDX54Q8TDD1 881 aaKnown RBP9.29□□□□□ -0.92
IFT88-201ENST00000319980 KIF1BPQ96EK5 621 aa9.29□□□□□ -0.92
IFT88-201ENST00000319980 ERC2O15083 957 aa9.29□□□□□ -0.92
IFT88-201ENST00000319980 STAP2Q9UGK3 403 aa9.29□□□□□ -0.92
IFT88-201ENST00000319980 HSP90AA1P07900 732 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms