RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 DNAJC10Q8IXB1 793 aa16.54■□□□□ 0.24
TPT1-201ENST00000309246 SLC52A2Q9HAB3 445 aa16.54■□□□□ 0.24
TPT1-201ENST00000309246 RNMTO43148 476 aaKnown RBP16.53■□□□□ 0.24
TPT1-201ENST00000309246 DDR1Q08345 913 aa16.53■□□□□ 0.24
TPT1-201ENST00000309246 SLC39A6Q13433 755 aa16.53■□□□□ 0.24
TPT1-201ENST00000309246 CC2D1BQ5T0F9 858 aaKnown RBP16.53■□□□□ 0.24
TPT1-201ENST00000309246 ARHGAP27Q6ZUM4 889 aa16.53■□□□□ 0.24
TPT1-201ENST00000309246 SBF1O95248 1867 aa16.52■□□□□ 0.24
TPT1-201ENST00000309246 KIF3CO14782 793 aa16.52■□□□□ 0.24
TPT1-201ENST00000309246 PER1O15534 1290 aaPredicted RBP16.51■□□□□ 0.23
TPT1-201ENST00000309246 HSPA6P17066 643 aa16.51■□□□□ 0.23
TPT1-201ENST00000309246 KCNA3P22001 575 aa16.51■□□□□ 0.23
TPT1-201ENST00000309246 MTHFSDQ2M296 383 aaKnown RBP16.51■□□□□ 0.23
TPT1-201ENST00000309246 SIPA1L3O60292 1781 aaPredicted RBP16.51■□□□□ 0.23
TPT1-201ENST00000309246 DLEC1Q9Y238 1755 aa16.51■□□□□ 0.23
TPT1-201ENST00000309246 NRXN2Q9P2S2 1712 aa16.5■□□□□ 0.23
TPT1-201ENST00000309246 SOS1Q07889 1333 aaPredicted RBP16.5■□□□□ 0.23
TPT1-201ENST00000309246 COL3A1P02461 1466 aaPredicted RBP16.5■□□□□ 0.23
TPT1-201ENST00000309246 DIAPH1O60610 1272 aaKnown RBP16.5■□□□□ 0.23
TPT1-201ENST00000309246 POLRMTO00411 1230 aaKnown RBP16.49■□□□□ 0.23
TPT1-201ENST00000309246 ZPR1O75312 459 aa16.49■□□□□ 0.23
TPT1-201ENST00000309246 CYP19A1P11511 503 aaPredicted RBP16.49■□□□□ 0.23
TPT1-201ENST00000309246 CNGB1Q14028 1251 aaPredicted RBP16.49■□□□□ 0.23
TPT1-201ENST00000309246 USPL1Q5W0Q7 1092 aa16.49■□□□□ 0.23
TPT1-201ENST00000309246 PIM2Q9P1W9 311 aa16.49■□□□□ 0.23
TPT1-201ENST00000309246 COL15A1P39059 1388 aa16.49■□□□□ 0.23
TPT1-201ENST00000309246 CHRNA5P30532 468 aa16.48■□□□□ 0.23
TPT1-201ENST00000309246 ZBTB1Q9Y2K1 713 aa16.48■□□□□ 0.23
TPT1-201ENST00000309246 TM4SF1P30408 202 aa16.47■□□□□ 0.23
TPT1-201ENST00000309246 DALRD3Q5D0E6 543 aaKnown RBP16.47■□□□□ 0.23
TPT1-201ENST00000309246 CCDC88AQ3V6T2 1871 aa16.47■□□□□ 0.23
TPT1-201ENST00000309246 DSG3P32926 999 aa16.46■□□□□ 0.23
TPT1-201ENST00000309246 C9orf131Q5VYM1 1079 aa16.46■□□□□ 0.23
TPT1-201ENST00000309246 NMRK2Q9NPI5 230 aa16.46■□□□□ 0.23
TPT1-201ENST00000309246 U2SURPO15042 1029 aaKnown RBP16.45■□□□□ 0.22
TPT1-201ENST00000309246 NFIXQ14938 502 aa16.45■□□□□ 0.22
TPT1-201ENST00000309246 NARFQ9UHQ1 456 aa16.45■□□□□ 0.22
TPT1-201ENST00000309246 SCN7AQ01118 1682 aa16.45■□□□□ 0.22
TPT1-201ENST00000309246 ANKRD31Q8N7Z5 1873 aa16.44■□□□□ 0.22
TPT1-201ENST00000309246 TNRC6CQ9HCJ0 1690 aaKnown RBP16.44■□□□□ 0.22
TPT1-201ENST00000309246 NPC1L1Q9UHC9 1359 aa16.44■□□□□ 0.22
TPT1-201ENST00000309246 CANXP27824 592 aaKnown RBP16.44■□□□□ 0.22
TPT1-201ENST00000309246 BCL2L12Q9HB09 334 aa16.44■□□□□ 0.22
TPT1-201ENST00000309246 VSIG10Q8N0Z9 540 aa16.43■□□□□ 0.22
TPT1-201ENST00000309246 WDR90Q96KV7 1748 aa16.42■□□□□ 0.22
TPT1-201ENST00000309246 TOMM70O94826 608 aa16.42■□□□□ 0.22
TPT1-201ENST00000309246 TTC5Q8N0Z6 440 aa16.42■□□□□ 0.22
TPT1-201ENST00000309246 RNF181Q9P0P0 153 aa16.42■□□□□ 0.22
TPT1-201ENST00000309246 TIAM2Q8IVF5 1701 aa16.42■□□□□ 0.22
TPT1-201ENST00000309246 CACNA1SQ13698 1873 aa16.42■□□□□ 0.22
TPT1-201ENST00000309246 SERPINB2P05120 415 aa16.41■□□□□ 0.22
TPT1-201ENST00000309246 TEFQ10587 303 aa16.41■□□□□ 0.22
TPT1-201ENST00000309246 IL17REQ8NFR9 667 aa16.41■□□□□ 0.22
TPT1-201ENST00000309246 COL11A2P13942 1736 aaPredicted RBP16.41■□□□□ 0.22
TPT1-201ENST00000309246 CARMIL3Q8ND23 1372 aa16.4■□□□□ 0.22
TPT1-201ENST00000309246 GNAT3A8MTJ3 354 aa16.4■□□□□ 0.22
TPT1-201ENST00000309246 GAS2L2Q8NHY3 880 aa16.4■□□□□ 0.22
TPT1-201ENST00000309246 ZNF496Q96IT1 587 aaPredicted RBP16.4■□□□□ 0.22
TPT1-201ENST00000309246 BCORQ6W2J9 1755 aa16.4■□□□□ 0.22
TPT1-201ENST00000309246 HEG1Q9ULI3 1381 aa16.39■□□□□ 0.21
TPT1-201ENST00000309246 STARD3NLO95772 234 aa16.39■□□□□ 0.21
TPT1-201ENST00000309246 RASSF7Q02833 373 aa16.39■□□□□ 0.21
TPT1-201ENST00000309246 ZNF790Q6PG37 636 aa16.39■□□□□ 0.21
TPT1-201ENST00000309246 BICDL1Q6ZP65 573 aa16.39■□□□□ 0.21
TPT1-201ENST00000309246 APLP1P51693 650 aa16.38■□□□□ 0.21
TPT1-201ENST00000309246 EIF5P55010 431 aaKnown RBP16.38■□□□□ 0.21
TPT1-201ENST00000309246 ZNF330Q9Y3S2 320 aaPredicted RBP16.38■□□□□ 0.21
TPT1-201ENST00000309246 C2CD5Q86YS7 1000 aa16.37■□□□□ 0.21
TPT1-201ENST00000309246 C16orf71Q8IYS4 520 aaPredicted RBP16.37■□□□□ 0.21
TPT1-201ENST00000309246 KDM2BQ8NHM5 1336 aa16.37■□□□□ 0.21
TPT1-201ENST00000309246 A0A087WZG4 1122 aa16.36■□□□□ 0.21
TPT1-201ENST00000309246 ABCB7O75027 752 aa16.36■□□□□ 0.21
TPT1-201ENST00000309246 PRKAR2BP31323 418 aa16.36■□□□□ 0.21
TPT1-201ENST00000309246 TBC1D9BQ66K14 1250 aa16.36■□□□□ 0.21
TPT1-201ENST00000309246 RBM46Q8TBY0 533 aaKnown RBP16.36■□□□□ 0.21
TPT1-201ENST00000309246 PHACTR3Q96KR7 559 aa16.36■□□□□ 0.21
TPT1-201ENST00000309246 DICER1Q9UPY3 1922 aaKnown RBP16.36■□□□□ 0.21
TPT1-201ENST00000309246 CEMIPQ8WUJ3 1361 aa16.36■□□□□ 0.21
TPT1-201ENST00000309246 FER1L6Q2WGJ9 1857 aa16.35■□□□□ 0.21
TPT1-201ENST00000309246 IFFO2Q5TF58 517 aa16.35■□□□□ 0.21
TPT1-201ENST00000309246 TTLL6Q8N841 843 aa16.35■□□□□ 0.21
TPT1-201ENST00000309246 RRAGCQ9HB90 399 aa16.35■□□□□ 0.21
TPT1-201ENST00000309246 TBC1D2BQ9UPU7 963 aa16.35■□□□□ 0.21
TPT1-201ENST00000309246 CEP350Q5VT06 3117 aa16.35■□□□□ 0.21
TPT1-201ENST00000309246 KCNQ3O43525 872 aa16.34■□□□□ 0.21
TPT1-201ENST00000309246 PRELPP51888 382 aa16.34■□□□□ 0.21
TPT1-201ENST00000309246 CFAP53Q96M91 514 aa16.34■□□□□ 0.21
TPT1-201ENST00000309246 FMNL2Q96PY5 1086 aa16.34■□□□□ 0.21
TPT1-201ENST00000309246 TEX13AQ9BXU3 409 aaPredicted RBP16.34■□□□□ 0.21
TPT1-201ENST00000309246 RSPH6AQ9H0K4 717 aa16.34■□□□□ 0.21
TPT1-201ENST00000309246 ARFGEF2Q9Y6D5 1785 aa16.33■□□□□ 0.21
TPT1-201ENST00000309246 DLG5Q8TDM6 1919 aa16.33■□□□□ 0.21
TPT1-201ENST00000309246 H0YIN7 160 aa16.33■□□□□ 0.2
TPT1-201ENST00000309246 A1BGP04217 495 aa16.33■□□□□ 0.2
TPT1-201ENST00000309246 IL6STP40189 918 aaPredicted RBP16.33■□□□□ 0.2
TPT1-201ENST00000309246 CCDC24Q8N4L8 307 aa16.33■□□□□ 0.2
TPT1-201ENST00000309246 BTBD11A6QL63 1104 aa16.32■□□□□ 0.2
TPT1-201ENST00000309246 LMNB1P20700 586 aa16.32■□□□□ 0.2
TPT1-201ENST00000309246 POLA2Q14181 598 aa16.32■□□□□ 0.2
TPT1-201ENST00000309246 SLX4Q8IY92 1834 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms