RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 SCN4AP35499 1836 aa16.43■□□□□ 0.22
SMIM4-201ENST00000307106 EIF4A2Q14240 407 aaKnown RBP16.43■□□□□ 0.22
SMIM4-201ENST00000307106 DPY19L2Q6NUT2 758 aa16.43■□□□□ 0.22
SMIM4-201ENST00000307106 PRDM10Q9NQV6 1147 aa16.43■□□□□ 0.22
SMIM4-201ENST00000307106 COL11A2P13942 1736 aaPredicted RBP16.42■□□□□ 0.22
SMIM4-201ENST00000307106 ZPR1O75312 459 aa16.42■□□□□ 0.22
SMIM4-201ENST00000307106 USPL1Q5W0Q7 1092 aa16.42■□□□□ 0.22
SMIM4-201ENST00000307106 TTLL6Q8N841 843 aa16.42■□□□□ 0.22
SMIM4-201ENST00000307106 POLKQ9UBT6 870 aa16.42■□□□□ 0.22
SMIM4-201ENST00000307106 NFKBIEO00221 500 aa16.41■□□□□ 0.22
SMIM4-201ENST00000307106 PLEKHO1Q53GL0 409 aaPredicted RBP16.41■□□□□ 0.22
SMIM4-201ENST00000307106 CDCA8Q53HL2 280 aa16.41■□□□□ 0.22
SMIM4-201ENST00000307106 ZNF530Q6P9A1 599 aaPredicted RBP16.41■□□□□ 0.22
SMIM4-201ENST00000307106 INTS5Q6P9B9 1019 aaKnown RBP16.41■□□□□ 0.22
SMIM4-201ENST00000307106 ARFGEF2Q9Y6D5 1785 aa16.41■□□□□ 0.22
SMIM4-201ENST00000307106 CHADLQ6NUI6 762 aa16.4■□□□□ 0.22
SMIM4-201ENST00000307106 CNTNAP1P78357 1384 aa16.39■□□□□ 0.21
SMIM4-201ENST00000307106 MTHFSP49914 203 aa16.39■□□□□ 0.21
SMIM4-201ENST00000307106 NFIXQ14938 502 aa16.39■□□□□ 0.21
SMIM4-201ENST00000307106 NFATC2IPQ8NCF5 419 aa16.39■□□□□ 0.21
SMIM4-201ENST00000307106 CTCFP49711 727 aaPredicted RBP16.38■□□□□ 0.21
SMIM4-201ENST00000307106 AMOTQ4VCS5 1084 aa16.38■□□□□ 0.21
SMIM4-201ENST00000307106 C2CD5Q86YS7 1000 aa16.38■□□□□ 0.21
SMIM4-201ENST00000307106 AIDAQ96BJ3 306 aa16.38■□□□□ 0.21
SMIM4-201ENST00000307106 SOS1Q07889 1333 aaPredicted RBP16.38■□□□□ 0.21
SMIM4-201ENST00000307106 SLX4Q8IY92 1834 aa16.38■□□□□ 0.21
SMIM4-201ENST00000307106 CARMIL3Q8ND23 1372 aa16.38■□□□□ 0.21
SMIM4-201ENST00000307106 H0YIN7 160 aa16.37■□□□□ 0.21
SMIM4-201ENST00000307106 SERPINB2P05120 415 aa16.37■□□□□ 0.21
SMIM4-201ENST00000307106 ERFEQ4G0M1 354 aa16.37■□□□□ 0.21
SMIM4-201ENST00000307106 C1orf141Q5JVX7 400 aa16.37■□□□□ 0.21
SMIM4-201ENST00000307106 POTEIP0CG38 1075 aa16.36■□□□□ 0.21
SMIM4-201ENST00000307106 POTEJP0CG39 1038 aa16.36■□□□□ 0.21
SMIM4-201ENST00000307106 DNAJC10Q8IXB1 793 aa16.36■□□□□ 0.21
SMIM4-201ENST00000307106 NARFQ9UHQ1 456 aa16.36■□□□□ 0.21
SMIM4-201ENST00000307106 COL15A1P39059 1388 aa16.36■□□□□ 0.21
SMIM4-201ENST00000307106 TNNT2P45379 298 aaPredicted RBP16.35■□□□□ 0.21
SMIM4-201ENST00000307106 FAM161AQ3B820 660 aa16.35■□□□□ 0.21
SMIM4-201ENST00000307106 UBR2Q8IWV8 1755 aa16.35■□□□□ 0.21
SMIM4-201ENST00000307106 SCN7AQ01118 1682 aa16.34■□□□□ 0.21
SMIM4-201ENST00000307106 BCL2L12Q9HB09 334 aa16.34■□□□□ 0.21
SMIM4-201ENST00000307106 DDNO94850 711 aaPredicted RBP16.33■□□□□ 0.2
SMIM4-201ENST00000307106 VEGFBP49765 207 aa16.33■□□□□ 0.2
SMIM4-201ENST00000307106 LBX1P52954 281 aa16.33■□□□□ 0.2
SMIM4-201ENST00000307106 ZNF219Q9P2Y4 722 aaPredicted RBP16.33■□□□□ 0.2
SMIM4-201ENST00000307106 PASKQ96RG2 1323 aa16.33■□□□□ 0.2
SMIM4-201ENST00000307106 C21orf2O43822 256 aa16.32■□□□□ 0.2
SMIM4-201ENST00000307106 CYP19A1P11511 503 aaPredicted RBP16.32■□□□□ 0.2
SMIM4-201ENST00000307106 ADAMTSL1Q8N6G6 1762 aa16.32■□□□□ 0.2
SMIM4-201ENST00000307106 ZNF622Q969S3 477 aaKnown RBP eCLIP16.32■□□□□ 0.2
SMIM4-201ENST00000307106 ABHD8Q96I13 439 aa16.32■□□□□ 0.2
SMIM4-201ENST00000307106 AEBP1Q8IUX7 1158 aa16.31■□□□□ 0.2
SMIM4-201ENST00000307106 WBP1LQ9NX94 342 aa16.31■□□□□ 0.2
SMIM4-201ENST00000307106 ZBTB1Q9Y2K1 713 aa16.31■□□□□ 0.2
SMIM4-201ENST00000307106 LTBP3Q9NS15 1303 aa16.3■□□□□ 0.2
SMIM4-201ENST00000307106 TMEM88BA6NKF7 163 aa16.3■□□□□ 0.2
SMIM4-201ENST00000307106 LDHDQ86WU2 507 aa16.3■□□□□ 0.2
SMIM4-201ENST00000307106 TAOK3Q9H2K8 898 aa16.3■□□□□ 0.2
SMIM4-201ENST00000307106 PCDH10Q9P2E7 1040 aa16.3■□□□□ 0.2
SMIM4-201ENST00000307106 MRC1P22897 1456 aa16.29■□□□□ 0.2
SMIM4-201ENST00000307106 TRPM7Q96QT4 1865 aa16.29■□□□□ 0.2
SMIM4-201ENST00000307106 IQCA1LA6NCM1 817 aa16.29■□□□□ 0.2
SMIM4-201ENST00000307106 BICDL1Q6ZP65 573 aa16.29■□□□□ 0.2
SMIM4-201ENST00000307106 PDZRN3Q9UPQ7 1066 aa16.29■□□□□ 0.2
SMIM4-201ENST00000307106 HSPA8P11142 646 aaKnown RBP16.28■□□□□ 0.2
SMIM4-201ENST00000307106 PDE6BP35913 854 aa16.28■□□□□ 0.2
SMIM4-201ENST00000307106 THSD7BQ9C0I4 1608 aa16.27■□□□□ 0.2
SMIM4-201ENST00000307106 TAF1DQ9H5J8 278 aaPredicted RBP16.27■□□□□ 0.2
SMIM4-201ENST00000307106 SLC52A2Q9HAB3 445 aa16.27■□□□□ 0.2
SMIM4-201ENST00000307106 BCORQ6W2J9 1755 aa16.27■□□□□ 0.2
SMIM4-201ENST00000307106 ITGBL1O95965 494 aaPredicted RBP16.26■□□□□ 0.19
SMIM4-201ENST00000307106 CANXP27824 592 aaKnown RBP16.26■□□□□ 0.19
SMIM4-201ENST00000307106 SLC39A6Q13433 755 aa16.26■□□□□ 0.19
SMIM4-201ENST00000307106 SULT6B1Q6IMI4 303 aa16.26■□□□□ 0.19
SMIM4-201ENST00000307106 BRIP1Q9BX63 1249 aa16.26■□□□□ 0.19
SMIM4-201ENST00000307106 MLLT1Q03111 559 aaPredicted RBP16.25■□□□□ 0.19
SMIM4-201ENST00000307106 EAPPQ56P03 285 aaPredicted RBP16.25■□□□□ 0.19
SMIM4-201ENST00000307106 AKAP4Q5JQC9 854 aa16.25■□□□□ 0.19
SMIM4-201ENST00000307106 TBC1D9BQ66K14 1250 aa16.25■□□□□ 0.19
SMIM4-201ENST00000307106 CCDC24Q8N4L8 307 aa16.25■□□□□ 0.19
SMIM4-201ENST00000307106 L3MBTL3Q96JM7 780 aaPredicted RBP16.25■□□□□ 0.19
SMIM4-201ENST00000307106 RASSF10A6NK89 507 aa16.24■□□□□ 0.19
SMIM4-201ENST00000307106 DEFB115Q30KQ5 88 aa16.24■□□□□ 0.19
SMIM4-201ENST00000307106 PRR5LQ6MZQ0 368 aa16.24■□□□□ 0.19
SMIM4-201ENST00000307106 LGR6Q9HBX8 967 aa16.24■□□□□ 0.19
SMIM4-201ENST00000307106 CASP8AP2Q9UKL3 1982 aa16.24■□□□□ 0.19
SMIM4-201ENST00000307106 CCDC85CA6NKD9 419 aa16.23■□□□□ 0.19
SMIM4-201ENST00000307106 MAP2K1Q02750 393 aaPredicted RBP16.23■□□□□ 0.19
SMIM4-201ENST00000307106 SOGA3Q5TF21 947 aa16.23■□□□□ 0.19
SMIM4-201ENST00000307106 VSIG10Q8N0Z9 540 aa16.23■□□□□ 0.19
SMIM4-201ENST00000307106 CNKSR1Q969H4 720 aa16.23■□□□□ 0.19
SMIM4-201ENST00000307106 CLEC11AQ9Y240 323 aa16.23■□□□□ 0.19
SMIM4-201ENST00000307106 SIPA1L3O60292 1781 aaPredicted RBP16.23■□□□□ 0.19
SMIM4-201ENST00000307106 WDR33Q9C0J8 1336 aaKnown RBP16.22■□□□□ 0.19
SMIM4-201ENST00000307106 A0A087WZG4 1122 aa16.22■□□□□ 0.19
SMIM4-201ENST00000307106 EIF5P55010 431 aaKnown RBP16.22■□□□□ 0.19
SMIM4-201ENST00000307106 PRPF40BQ6NWY9 871 aaKnown RBP16.22■□□□□ 0.19
SMIM4-201ENST00000307106 RGS19P49795 217 aa16.21■□□□□ 0.19
SMIM4-201ENST00000307106 STYK1Q6J9G0 422 aa16.21■□□□□ 0.19
SMIM4-201ENST00000307106 POLR3GLQ9BT43 218 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms