RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 SSH3Q8TE77 659 aa18.42■□□□□ 0.54
CSDC2-201ENST00000306149 MPRIPQ6WCQ1 1025 aa18.42■□□□□ 0.54
CSDC2-201ENST00000306149 SOS1Q07889 1333 aaPredicted RBP18.41■□□□□ 0.54
CSDC2-201ENST00000306149 MCCP23508 829 aa18.41■□□□□ 0.54
CSDC2-201ENST00000306149 EIF4A1P60842 406 aaKnown RBP18.41■□□□□ 0.54
CSDC2-201ENST00000306149 MARF1Q9Y4F3 1742 aaKnown RBP18.4■□□□□ 0.54
CSDC2-201ENST00000306149 XPCQ01831 940 aaPredicted RBP18.4■□□□□ 0.54
CSDC2-201ENST00000306149 RHPN1Q8TCX5 695 aa18.4■□□□□ 0.54
CSDC2-201ENST00000306149 IP6K1Q92551 441 aa18.4■□□□□ 0.54
CSDC2-201ENST00000306149 ESCO1Q5FWF5 840 aa18.39■□□□□ 0.53
CSDC2-201ENST00000306149 ANKARQ7Z5J8 1434 aa18.39■□□□□ 0.53
CSDC2-201ENST00000306149 PRIM1P49642 420 aaKnown RBP18.39■□□□□ 0.53
CSDC2-201ENST00000306149 PSME1Q06323 249 aa18.39■□□□□ 0.53
CSDC2-201ENST00000306149 LARP6Q9BRS8 491 aaKnown RBP18.38■□□□□ 0.53
CSDC2-201ENST00000306149 RBSNQ9H1K0 784 aa18.38■□□□□ 0.53
CSDC2-201ENST00000306149 TEFQ10587 303 aa18.37■□□□□ 0.53
CSDC2-201ENST00000306149 DNAAF4Q8WXU2 420 aa18.37■□□□□ 0.53
CSDC2-201ENST00000306149 BABAM1Q9NWV8 329 aa18.37■□□□□ 0.53
CSDC2-201ENST00000306149 BTBD11A6QL63 1104 aa18.37■□□□□ 0.53
CSDC2-201ENST00000306149 BEND3Q5T5X7 828 aa18.37■□□□□ 0.53
CSDC2-201ENST00000306149 ZNF530Q6P9A1 599 aaPredicted RBP18.37■□□□□ 0.53
CSDC2-201ENST00000306149 PI4K2BQ8TCG2 481 aa18.37■□□□□ 0.53
CSDC2-201ENST00000306149 ANP32BQ92688 251 aaKnown RBP18.37■□□□□ 0.53
CSDC2-201ENST00000306149 TMEM63CQ9P1W3 806 aa18.37■□□□□ 0.53
CSDC2-201ENST00000306149 CEMIPQ8WUJ3 1361 aa18.37■□□□□ 0.53
CSDC2-201ENST00000306149 POLA2Q14181 598 aa18.36■□□□□ 0.53
CSDC2-201ENST00000306149 LMOD2Q6P5Q4 547 aa18.36■□□□□ 0.53
CSDC2-201ENST00000306149 DTNBO60941 627 aa18.36■□□□□ 0.53
CSDC2-201ENST00000306149 CUL4AQ13619 759 aa18.36■□□□□ 0.53
CSDC2-201ENST00000306149 PRAMEF22A3QJZ6 481 aa18.35■□□□□ 0.53
CSDC2-201ENST00000306149 MCM2P49736 904 aa18.35■□□□□ 0.53
CSDC2-201ENST00000306149 ANAPC15P60006 121 aa18.35■□□□□ 0.53
CSDC2-201ENST00000306149 GDPD2Q9HCC8 539 aa18.35■□□□□ 0.53
CSDC2-201ENST00000306149 PXDNLA1KZ92 1463 aa18.35■□□□□ 0.53
CSDC2-201ENST00000306149 USP54Q70EL1 1684 aa18.35■□□□□ 0.53
CSDC2-201ENST00000306149 SYCE3A1L190 88 aa18.35■□□□□ 0.53
CSDC2-201ENST00000306149 BRD1O95696 1058 aa18.35■□□□□ 0.53
CSDC2-201ENST00000306149 OS9Q13438 667 aaPredicted RBP18.35■□□□□ 0.53
CSDC2-201ENST00000306149 RAB11FIP3O75154 756 aa18.34■□□□□ 0.53
CSDC2-201ENST00000306149 PROSER3Q2NL68 480 aa18.34■□□□□ 0.53
CSDC2-201ENST00000306149 TPRNQ4KMQ1 711 aa18.34■□□□□ 0.53
CSDC2-201ENST00000306149 CWC27Q6UX04 472 aaKnown RBP18.34■□□□□ 0.53
CSDC2-201ENST00000306149 SPG7Q9UQ90 795 aa18.34■□□□□ 0.53
CSDC2-201ENST00000306149 KIF1BPQ96EK5 621 aa18.34■□□□□ 0.53
CSDC2-201ENST00000306149 LTN1O94822 1766 aa18.34■□□□□ 0.53
CSDC2-201ENST00000306149 FER1L4A9Z1Z3 1794 aa18.33■□□□□ 0.52
CSDC2-201ENST00000306149 HSPA4P34932 840 aa18.33■□□□□ 0.52
CSDC2-201ENST00000306149 ZSCAN30Q86W11 494 aa18.32■□□□□ 0.52
CSDC2-201ENST00000306149 RASEFQ8IZ41 740 aa18.32■□□□□ 0.52
CSDC2-201ENST00000306149 PA2G4Q9UQ80 394 aaKnown RBP18.32■□□□□ 0.52
CSDC2-201ENST00000306149 CPA1P15085 419 aa18.32■□□□□ 0.52
CSDC2-201ENST00000306149 AOX1Q06278 1338 aa18.32■□□□□ 0.52
CSDC2-201ENST00000306149 ADCY9O60503 1353 aa18.32■□□□□ 0.52
CSDC2-201ENST00000306149 SGSM2O43147 1006 aa18.31■□□□□ 0.52
CSDC2-201ENST00000306149 CWF19L2Q2TBE0 894 aaKnown RBP18.31■□□□□ 0.52
CSDC2-201ENST00000306149 ORAI2Q96SN7 254 aa18.31■□□□□ 0.52
CSDC2-201ENST00000306149 MAP3K2Q9Y2U5 619 aa18.31■□□□□ 0.52
CSDC2-201ENST00000306149 RGPD2P0DJD1 1756 aa18.31■□□□□ 0.52
CSDC2-201ENST00000306149 AKAP4Q5JQC9 854 aa18.3■□□□□ 0.52
CSDC2-201ENST00000306149 IL17RAQ96F46 866 aa18.3■□□□□ 0.52
CSDC2-201ENST00000306149 SNX14Q9Y5W7 946 aa18.3■□□□□ 0.52
CSDC2-201ENST00000306149 HS1BP3Q53T59 392 aa18.3■□□□□ 0.52
CSDC2-201ENST00000306149 RNF214Q8ND24 703 aa18.3■□□□□ 0.52
CSDC2-201ENST00000306149 INTS4Q96HW7 963 aaKnown RBP18.3■□□□□ 0.52
CSDC2-201ENST00000306149 C9orf78Q9NZ63 289 aaPredicted RBP18.3■□□□□ 0.52
CSDC2-201ENST00000306149 PLEKHO1Q53GL0 409 aaPredicted RBP18.3■□□□□ 0.52
CSDC2-201ENST00000306149 CNTROBQ8N137 903 aa18.3■□□□□ 0.52
CSDC2-201ENST00000306149 LSG1Q9H089 658 aaKnown RBP18.29■□□□□ 0.52
CSDC2-201ENST00000306149 RNMTO43148 476 aaKnown RBP18.29■□□□□ 0.52
CSDC2-201ENST00000306149 GADD45BO75293 160 aaPredicted RBP18.29■□□□□ 0.52
CSDC2-201ENST00000306149 GCP02774 474 aa18.29■□□□□ 0.52
CSDC2-201ENST00000306149 C1orf141Q5JVX7 400 aa18.29■□□□□ 0.52
CSDC2-201ENST00000306149 RAD50Q92878 1312 aa18.29■□□□□ 0.52
CSDC2-201ENST00000306149 AIMP1Q12904 312 aaKnown RBP18.28■□□□□ 0.52
CSDC2-201ENST00000306149 DDX54Q8TDD1 881 aaKnown RBP18.28■□□□□ 0.52
CSDC2-201ENST00000306149 PDLIM2Q96JY6 352 aa18.28■□□□□ 0.52
CSDC2-201ENST00000306149 DBF4Q9UBU7 674 aaPredicted RBP18.28■□□□□ 0.52
CSDC2-201ENST00000306149 ANKLE2Q86XL3 938 aa18.28■□□□□ 0.52
CSDC2-201ENST00000306149 KCNH5Q8NCM2 988 aa18.28■□□□□ 0.52
CSDC2-201ENST00000306149 HOXB7P09629 217 aa18.27■□□□□ 0.52
CSDC2-201ENST00000306149 LRSAM1Q6UWE0 723 aa18.27■□□□□ 0.52
CSDC2-201ENST00000306149 KIAA1211Q6ZU35 1233 aa18.27■□□□□ 0.52
CSDC2-201ENST00000306149 NFAT5O94916 1531 aa18.27■□□□□ 0.52
CSDC2-201ENST00000306149 GIGYF1O75420 1035 aaPredicted RBP18.27■□□□□ 0.51
CSDC2-201ENST00000306149 AK2P54819 239 aa18.27■□□□□ 0.51
CSDC2-201ENST00000306149 AXIN2Q9Y2T1 843 aa18.27■□□□□ 0.51
CSDC2-201ENST00000306149 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.27■□□□□ 0.51
CSDC2-201ENST00000306149 PXDNQ92626 1479 aa18.27■□□□□ 0.51
CSDC2-201ENST00000306149 MBD3O95983 291 aa18.26■□□□□ 0.51
CSDC2-201ENST00000306149 TPM2P07951 284 aa18.26■□□□□ 0.51
CSDC2-201ENST00000306149 PTH1RQ03431 593 aa18.26■□□□□ 0.51
CSDC2-201ENST00000306149 CLASRPQ8N2M8 674 aaKnown RBP18.26■□□□□ 0.51
CSDC2-201ENST00000306149 ANKRD24Q8TF21 1146 aa18.26■□□□□ 0.51
CSDC2-201ENST00000306149 EPB41L2O43491 1005 aaKnown RBP18.25■□□□□ 0.51
CSDC2-201ENST00000306149 CRYBG1Q9Y4K1 1723 aa18.25■□□□□ 0.51
CSDC2-201ENST00000306149 TCHHQ07283 1943 aa18.25■□□□□ 0.51
CSDC2-201ENST00000306149 RUFY3Q7L099 469 aa18.25■□□□□ 0.51
CSDC2-201ENST00000306149 USP48Q86UV5 1035 aa18.25■□□□□ 0.51
CSDC2-201ENST00000306149 PKNOX2Q96KN3 472 aa18.25■□□□□ 0.51
CSDC2-201ENST00000306149 DIAPH3Q9NSV4 1193 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms