RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 RBM25P49756 843 aaKnown RBP24.07■■□□□ 1.44
HOXC4-201ENST00000303406 TOM1L2Q6ZVM7 507 aa24.07■■□□□ 1.44
HOXC4-201ENST00000303406 NFATC2IPQ8NCF5 419 aa24.07■■□□□ 1.44
HOXC4-201ENST00000303406 LAMB4A4D0S4 1761 aa24.07■■□□□ 1.44
HOXC4-201ENST00000303406 AHDC1Q5TGY3 1603 aaPredicted RBP24.07■■□□□ 1.44
HOXC4-201ENST00000303406 GSPT1P15170 499 aaKnown RBP24.06■■□□□ 1.44
HOXC4-201ENST00000303406 POLA2Q14181 598 aa24.06■■□□□ 1.44
HOXC4-201ENST00000303406 NKX1-1Q15270 411 aaPredicted RBP24.06■■□□□ 1.44
HOXC4-201ENST00000303406 ZCRB1Q8TBF4 217 aaKnown RBP24.05■■□□□ 1.44
HOXC4-201ENST00000303406 COL22A1Q8NFW1 1626 aaPredicted RBP24.05■■□□□ 1.44
HOXC4-201ENST00000303406 GLI3P10071 1580 aa24.05■■□□□ 1.44
HOXC4-201ENST00000303406 PNMA6EA0A0J9YXQ4 647 aa24.05■■□□□ 1.44
HOXC4-201ENST00000303406 PDIA6Q15084 440 aa24.05■■□□□ 1.44
HOXC4-201ENST00000303406 TTC5Q8N0Z6 440 aa24.05■■□□□ 1.44
HOXC4-201ENST00000303406 LRRCC1Q9C099 1032 aa24.05■■□□□ 1.44
HOXC4-201ENST00000303406 SHANK3Q9BYB0 1731 aa24.04■■□□□ 1.44
HOXC4-201ENST00000303406 RAB11FIP3O75154 756 aa24.04■■□□□ 1.44
HOXC4-201ENST00000303406 SNRPA1P09661 255 aaKnown RBP24.04■■□□□ 1.44
HOXC4-201ENST00000303406 TBC1D9Q6ZT07 1266 aa24.04■■□□□ 1.44
HOXC4-201ENST00000303406 FMNL2Q96PY5 1086 aa24.04■■□□□ 1.44
HOXC4-201ENST00000303406 PAPPAQ13219 1627 aa24.04■■□□□ 1.44
HOXC4-201ENST00000303406 ERVV-2B6SEH9 535 aa24.03■■□□□ 1.44
HOXC4-201ENST00000303406 IL2RBP14784 551 aa24.03■■□□□ 1.44
HOXC4-201ENST00000303406 CABP4P57796 275 aa24.03■■□□□ 1.44
HOXC4-201ENST00000303406 PROSER3Q2NL68 480 aa24.03■■□□□ 1.44
HOXC4-201ENST00000303406 C16orf71Q8IYS4 520 aaPredicted RBP24.03■■□□□ 1.44
HOXC4-201ENST00000303406 MAP3K2Q9Y2U5 619 aa24.03■■□□□ 1.44
HOXC4-201ENST00000303406 SALL3Q9BXA9 1300 aa24.02■■□□□ 1.44
HOXC4-201ENST00000303406 UBR2Q8IWV8 1755 aa24.02■■□□□ 1.44
HOXC4-201ENST00000303406 PRAMEF22A3QJZ6 481 aa24.02■■□□□ 1.44
HOXC4-201ENST00000303406 ANXA1P04083 346 aa24.02■■□□□ 1.44
HOXC4-201ENST00000303406 SLC39A6Q13433 755 aa24.02■■□□□ 1.44
HOXC4-201ENST00000303406 MTX1Q13505 466 aa24.02■■□□□ 1.44
HOXC4-201ENST00000303406 COL14A1Q05707 1796 aaKnown RBP24.02■■□□□ 1.44
HOXC4-201ENST00000303406 UTYO14607 1347 aa24.01■■□□□ 1.43
HOXC4-201ENST00000303406 ERBB4Q15303 1308 aa24.01■■□□□ 1.43
HOXC4-201ENST00000303406 SMARCA5O60264 1052 aaPredicted RBP24.01■■□□□ 1.43
HOXC4-201ENST00000303406 LINS1Q8NG48 757 aa24.01■■□□□ 1.43
HOXC4-201ENST00000303406 ZNF496Q96IT1 587 aaPredicted RBP24.01■■□□□ 1.43
HOXC4-201ENST00000303406 ROBO1Q9Y6N7 1651 aa24■■□□□ 1.43
HOXC4-201ENST00000303406 AOX1Q06278 1338 aa24■■□□□ 1.43
HOXC4-201ENST00000303406 SLC4A3P48751 1232 aa24■■□□□ 1.43
HOXC4-201ENST00000303406 EXOC6BQ9Y2D4 811 aa24■■□□□ 1.43
HOXC4-201ENST00000303406 PDE1AP54750 535 aa23.99■■□□□ 1.43
HOXC4-201ENST00000303406 PPP1R42Q7Z4L9 355 aa23.99■■□□□ 1.43
HOXC4-201ENST00000303406 OTUD7AQ8TE49 926 aaPredicted RBP23.99■■□□□ 1.43
HOXC4-201ENST00000303406 USP35Q9P2H5 1018 aa23.99■■□□□ 1.43
HOXC4-201ENST00000303406 TUBGCP6Q96RT7 1819 aa23.98■■□□□ 1.43
HOXC4-201ENST00000303406 NBPF7P0C2Y1 421 aaPredicted RBP23.98■■□□□ 1.43
HOXC4-201ENST00000303406 HSP90AB4PQ58FF6 505 aa23.98■■□□□ 1.43
HOXC4-201ENST00000303406 LARP1Q6PKG0 1096 aaKnown RBP23.98■■□□□ 1.43
HOXC4-201ENST00000303406 STAP2Q9UGK3 403 aa23.98■■□□□ 1.43
HOXC4-201ENST00000303406 EVA1CP58658 441 aa23.97■■□□□ 1.43
HOXC4-201ENST00000303406 LTBP4Q8N2S1 1624 aa23.96■■□□□ 1.43
HOXC4-201ENST00000303406 CASC1Q6TDU7 716 aa23.96■■□□□ 1.43
HOXC4-201ENST00000303406 LRP10Q7Z4F1 713 aa23.96■■□□□ 1.43
HOXC4-201ENST00000303406 APBB1O00213 710 aa23.95■■□□□ 1.43
HOXC4-201ENST00000303406 SDSP20132 328 aa23.95■■□□□ 1.43
HOXC4-201ENST00000303406 TBC1D2Q9BYX2 928 aa23.95■■□□□ 1.43
HOXC4-201ENST00000303406 PLCH1Q4KWH8 1693 aa23.95■■□□□ 1.42
HOXC4-201ENST00000303406 TNS2Q63HR2 1409 aa23.95■■□□□ 1.42
HOXC4-201ENST00000303406 SNX21Q969T3 373 aa23.94■■□□□ 1.42
HOXC4-201ENST00000303406 C9orf78Q9NZ63 289 aaPredicted RBP23.94■■□□□ 1.42
HOXC4-201ENST00000303406 KCPQ6ZWJ8 1503 aa23.94■■□□□ 1.42
HOXC4-201ENST00000303406 SRGAP3O43295 1099 aa23.94■■□□□ 1.42
HOXC4-201ENST00000303406 GRM8O00222 908 aa23.93■■□□□ 1.42
HOXC4-201ENST00000303406 MX1P20591 662 aa23.93■■□□□ 1.42
HOXC4-201ENST00000303406 NEXNQ0ZGT2 675 aa23.93■■□□□ 1.42
HOXC4-201ENST00000303406 KIF1BPQ96EK5 621 aa23.93■■□□□ 1.42
HOXC4-201ENST00000303406 METTL22Q9BUU2 404 aaPredicted RBP23.93■■□□□ 1.42
HOXC4-201ENST00000303406 RIC3Q7Z5B4 369 aa23.92■■□□□ 1.42
HOXC4-201ENST00000303406 XAGE3Q8WTP9 111 aa23.92■■□□□ 1.42
HOXC4-201ENST00000303406 STRN4Q9NRL3 753 aa23.92■■□□□ 1.42
HOXC4-201ENST00000303406 USP16Q9Y5T5 823 aa23.92■■□□□ 1.42
HOXC4-201ENST00000303406 DISP2A7MBM2 1401 aa23.92■■□□□ 1.42
HOXC4-201ENST00000303406 SURF6O75683 361 aaKnown RBP23.91■■□□□ 1.42
HOXC4-201ENST00000303406 COL15A1P39059 1388 aa23.91■■□□□ 1.42
HOXC4-201ENST00000303406 COL16A1Q07092 1604 aaPredicted RBP23.9■■□□□ 1.42
HOXC4-201ENST00000303406 RTL5Q5HYW3 569 aaPredicted RBP23.9■■□□□ 1.42
HOXC4-201ENST00000303406 COPS6Q7L5N1 327 aa23.9■■□□□ 1.42
HOXC4-201ENST00000303406 RHPN1Q8TCX5 695 aa23.9■■□□□ 1.42
HOXC4-201ENST00000303406 TOGARAM1Q9Y4F4 1720 aa23.9■■□□□ 1.42
HOXC4-201ENST00000303406 LRP6O75581 1613 aa23.89■■□□□ 1.42
HOXC4-201ENST00000303406 ARFGEF2Q9Y6D5 1785 aa23.89■■□□□ 1.41
HOXC4-201ENST00000303406 IGKV5-2P06315 115 aa23.89■■□□□ 1.41
HOXC4-201ENST00000303406 AIMP1Q12904 312 aaKnown RBP23.89■■□□□ 1.41
HOXC4-201ENST00000303406 CWF19L2Q2TBE0 894 aaKnown RBP23.89■■□□□ 1.41
HOXC4-201ENST00000303406 NEURL1BA8MQ27 555 aa23.88■■□□□ 1.41
HOXC4-201ENST00000303406 MYL6BP14649 208 aa23.88■■□□□ 1.41
HOXC4-201ENST00000303406 NBR1Q14596 966 aa23.88■■□□□ 1.41
HOXC4-201ENST00000303406 ANKRD13DQ6ZTN6 518 aa23.88■■□□□ 1.41
HOXC4-201ENST00000303406 ERC1Q8IUD2 1116 aa23.88■■□□□ 1.41
HOXC4-201ENST00000303406 USP42Q9H9J4 1324 aaKnown RBP23.87■■□□□ 1.41
HOXC4-201ENST00000303406 HSCBQ8IWL3 235 aa23.87■■□□□ 1.41
HOXC4-201ENST00000303406 BTG4Q9NY30 223 aa23.87■■□□□ 1.41
HOXC4-201ENST00000303406 WNK3Q9BYP7 1800 aa23.87■■□□□ 1.41
HOXC4-201ENST00000303406 KIF2CQ99661 725 aa23.86■■□□□ 1.41
HOXC4-201ENST00000303406 REC8O95072 547 aa23.85■■□□□ 1.41
HOXC4-201ENST00000303406 GCKRQ14397 625 aa23.85■■□□□ 1.41
HOXC4-201ENST00000303406 PLBD2Q8NHP8 589 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms