RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 CHD1O14646 1710 aa17.53■□□□□ 0.4
COL6A2-201ENST00000300527 OSBPL3Q9H4L5 887 aa17.53■□□□□ 0.4
COL6A2-201ENST00000300527 SPTLC3Q9NUV7 552 aa17.52■□□□□ 0.4
COL6A2-201ENST00000300527 INO80Q9ULG1 1556 aaPredicted RBP17.52■□□□□ 0.4
COL6A2-201ENST00000300527 RGS12O14924 1447 aa17.52■□□□□ 0.4
COL6A2-201ENST00000300527 TPD52L1Q16890 204 aaPredicted RBP17.52■□□□□ 0.4
COL6A2-201ENST00000300527 ZC3H13Q5T200 1668 aaKnown RBP17.52■□□□□ 0.39
COL6A2-201ENST00000300527 TNNT1P13805 278 aa17.52■□□□□ 0.39
COL6A2-201ENST00000300527 PRPF40BQ6NWY9 871 aaKnown RBP17.52■□□□□ 0.39
COL6A2-201ENST00000300527 UBTFL1P0CB47 393 aaPredicted RBP17.51■□□□□ 0.39
COL6A2-201ENST00000300527 FOSBP53539 338 aa17.51■□□□□ 0.39
COL6A2-201ENST00000300527 IFT172Q9UG01 1749 aa17.51■□□□□ 0.39
COL6A2-201ENST00000300527 GNAI3P08754 354 aa17.51■□□□□ 0.39
COL6A2-201ENST00000300527 HSPA4P34932 840 aa17.51■□□□□ 0.39
COL6A2-201ENST00000300527 GTF2F1P35269 517 aaKnown RBP eCLIP17.51■□□□□ 0.39
COL6A2-201ENST00000300527 FLIIQ13045 1269 aa17.51■□□□□ 0.39
COL6A2-201ENST00000300527 KIF24Q5T7B8 1368 aa17.5■□□□□ 0.39
COL6A2-201ENST00000300527 STK3Q13188 491 aa17.5■□□□□ 0.39
COL6A2-201ENST00000300527 NUP62CLQ9H1M0 184 aa17.5■□□□□ 0.39
COL6A2-201ENST00000300527 POGZQ7Z3K3 1410 aa17.5■□□□□ 0.39
COL6A2-201ENST00000300527 LIG1P18858 919 aa17.5■□□□□ 0.39
COL6A2-201ENST00000300527 EIF2S2P20042 333 aaKnown RBP17.5■□□□□ 0.39
COL6A2-201ENST00000300527 MLECQ14165 292 aa17.5■□□□□ 0.39
COL6A2-201ENST00000300527 NUDT16Q96DE0 195 aaKnown RBP17.5■□□□□ 0.39
COL6A2-201ENST00000300527 MAP3K11Q16584 847 aa17.49■□□□□ 0.39
COL6A2-201ENST00000300527 ANO6Q4KMQ2 910 aa17.49■□□□□ 0.39
COL6A2-201ENST00000300527 PDRG1Q9NUG6 133 aa17.49■□□□□ 0.39
COL6A2-201ENST00000300527 ZBTB22O15209 634 aa17.49■□□□□ 0.39
COL6A2-201ENST00000300527 CEBPZQ03701 1054 aaKnown RBP17.49■□□□□ 0.39
COL6A2-201ENST00000300527 LARP1BQ659C4 914 aaKnown RBP17.49■□□□□ 0.39
COL6A2-201ENST00000300527 BBXQ8WY36 941 aaPredicted RBP17.49■□□□□ 0.39
COL6A2-201ENST00000300527 TNMDQ9H2S6 317 aa17.49■□□□□ 0.39
COL6A2-201ENST00000300527 ERICH4A6NGS2 130 aa17.48■□□□□ 0.39
COL6A2-201ENST00000300527 ATP8B2P98198 1209 aa17.48■□□□□ 0.39
COL6A2-201ENST00000300527 PPLO60437 1756 aa17.48■□□□□ 0.39
COL6A2-201ENST00000300527 ARHGEF28Q8N1W1 1705 aaKnown RBP17.48■□□□□ 0.39
COL6A2-201ENST00000300527 TYRO3Q06418 890 aa17.48■□□□□ 0.39
COL6A2-201ENST00000300527 CCDC112Q8NEF3 446 aa17.48■□□□□ 0.39
COL6A2-201ENST00000300527 BICD2Q8TD16 824 aa17.48■□□□□ 0.39
COL6A2-201ENST00000300527 SRGAP3O43295 1099 aa17.48■□□□□ 0.39
COL6A2-201ENST00000300527 ADCK5Q3MIX3 580 aa17.48■□□□□ 0.39
COL6A2-201ENST00000300527 LTV1Q96GA3 475 aaPredicted RBP17.48■□□□□ 0.39
COL6A2-201ENST00000300527 SLC52A1Q9NWF4 448 aa17.48■□□□□ 0.39
COL6A2-201ENST00000300527 DACT1Q9NYF0 836 aa17.48■□□□□ 0.39
COL6A2-201ENST00000300527 NCBP1Q09161 790 aaKnown RBP17.47■□□□□ 0.39
COL6A2-201ENST00000300527 PPP1R42Q7Z4L9 355 aa17.47■□□□□ 0.39
COL6A2-201ENST00000300527 TRMT1Q9NXH9 659 aaKnown RBP17.47■□□□□ 0.39
COL6A2-201ENST00000300527 MTMR6Q9Y217 621 aa17.47■□□□□ 0.39
COL6A2-201ENST00000300527 TCHHQ07283 1943 aa17.46■□□□□ 0.39
COL6A2-201ENST00000300527 MTHFSDQ2M296 383 aaKnown RBP17.46■□□□□ 0.39
COL6A2-201ENST00000300527 FAM200AQ8TCP9 573 aa17.46■□□□□ 0.39
COL6A2-201ENST00000300527 REREQ9P2R6 1566 aa17.46■□□□□ 0.39
COL6A2-201ENST00000300527 KIF20AO95235 890 aa17.46■□□□□ 0.39
COL6A2-201ENST00000300527 TTC6Q86TZ1 520 aa17.46■□□□□ 0.39
COL6A2-201ENST00000300527 CNTROBQ8N137 903 aa17.46■□□□□ 0.39
COL6A2-201ENST00000300527 NEURL4Q96JN8 1562 aa17.46■□□□□ 0.38
COL6A2-201ENST00000300527 SGSM2O43147 1006 aa17.45■□□□□ 0.38
COL6A2-201ENST00000300527 DNAJC25Q9H1X3 360 aa17.45■□□□□ 0.38
COL6A2-201ENST00000300527 WASLO00401 505 aaPredicted RBP17.45■□□□□ 0.38
COL6A2-201ENST00000300527 RAD50Q92878 1312 aa17.45■□□□□ 0.38
COL6A2-201ENST00000300527 PTPRMP28827 1452 aa17.45■□□□□ 0.38
COL6A2-201ENST00000300527 TPM3P06753 285 aa17.45■□□□□ 0.38
COL6A2-201ENST00000300527 KRT85P78386 507 aa17.45■□□□□ 0.38
COL6A2-201ENST00000300527 FILIP1Q7Z7B0 1213 aa17.45■□□□□ 0.38
COL6A2-201ENST00000300527 TRERF1Q96PN7 1200 aa17.45■□□□□ 0.38
COL6A2-201ENST00000300527 CBX8Q9HC52 389 aa17.45■□□□□ 0.38
COL6A2-201ENST00000300527 A0A087WWV3 80 aa17.44■□□□□ 0.38
COL6A2-201ENST00000300527 PTH1RQ03431 593 aa17.44■□□□□ 0.38
COL6A2-201ENST00000300527 CDC37L1Q7L3B6 337 aa17.44■□□□□ 0.38
COL6A2-201ENST00000300527 TMEM87AQ8NBN3 555 aa17.44■□□□□ 0.38
COL6A2-201ENST00000300527 RHPN1Q8TCX5 695 aa17.44■□□□□ 0.38
COL6A2-201ENST00000300527 CYP46A1Q9Y6A2 500 aa17.44■□□□□ 0.38
COL6A2-201ENST00000300527 ASXL2Q76L83 1435 aa17.44■□□□□ 0.38
COL6A2-201ENST00000300527 VGLL3A8MV65 326 aa17.44■□□□□ 0.38
COL6A2-201ENST00000300527 PPFIA3O75145 1194 aa17.44■□□□□ 0.38
COL6A2-201ENST00000300527 FUCA2Q9BTY2 467 aa17.44■□□□□ 0.38
COL6A2-201ENST00000300527 CLIP2Q9UDT6 1046 aa17.44■□□□□ 0.38
COL6A2-201ENST00000300527 TAOK2Q9UL54 1235 aa17.44■□□□□ 0.38
COL6A2-201ENST00000300527 MRVI1Q9Y6F6 885 aa17.44■□□□□ 0.38
COL6A2-201ENST00000300527 ANXA1P04083 346 aa17.43■□□□□ 0.38
COL6A2-201ENST00000300527 ARID5BQ14865 1188 aa17.43■□□□□ 0.38
COL6A2-201ENST00000300527 SYTL4Q96C24 671 aaPredicted RBP17.43■□□□□ 0.38
COL6A2-201ENST00000300527 PHAXQ9H814 394 aaKnown RBP17.43■□□□□ 0.38
COL6A2-201ENST00000300527 SALL3Q9BXA9 1300 aa17.43■□□□□ 0.38
COL6A2-201ENST00000300527 CCDC30Q5VVM6 783 aa17.42■□□□□ 0.38
COL6A2-201ENST00000300527 ANKRD7Q92527 254 aa17.42■□□□□ 0.38
COL6A2-201ENST00000300527 SPATA32Q96LK8 384 aa17.42■□□□□ 0.38
COL6A2-201ENST00000300527 LSG1Q9H089 658 aaKnown RBP17.42■□□□□ 0.38
COL6A2-201ENST00000300527 ME3Q16798 604 aa17.42■□□□□ 0.38
COL6A2-201ENST00000300527 TTC14Q96N46 770 aa17.42■□□□□ 0.38
COL6A2-201ENST00000300527 CCDC61Q9Y6R9 512 aa17.42■□□□□ 0.38
COL6A2-201ENST00000300527 NEXMIFQ5QGS0 1516 aa17.42■□□□□ 0.38
COL6A2-201ENST00000300527 CDK11BP21127 795 aaKnown RBP17.42■□□□□ 0.38
COL6A2-201ENST00000300527 RAB11FIP3O75154 756 aa17.41■□□□□ 0.38
COL6A2-201ENST00000300527 ZNF165P49910 485 aa17.41■□□□□ 0.38
COL6A2-201ENST00000300527 OGFRQ9NZT2 677 aa17.41■□□□□ 0.38
COL6A2-201ENST00000300527 DDX11Q96FC9 970 aa17.41■□□□□ 0.38
COL6A2-201ENST00000300527 USP44Q9H0E7 712 aa17.41■□□□□ 0.38
COL6A2-201ENST00000300527 HYPKQ9NX55 129 aa17.41■□□□□ 0.38
COL6A2-201ENST00000300527 NUTM2GQ5VZR2 741 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms