RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 PAPPAQ13219 1627 aa19.73■□□□□ 0.75
HERPUD1-201ENST00000300302 MEIS3Q99687 375 aa19.73■□□□□ 0.75
HERPUD1-201ENST00000300302 UBR2Q8IWV8 1755 aa19.72■□□□□ 0.75
HERPUD1-201ENST00000300302 TOGARAM1Q9Y4F4 1720 aa19.72■□□□□ 0.75
HERPUD1-201ENST00000300302 DDX58O95786 925 aaKnown RBP19.72■□□□□ 0.75
HERPUD1-201ENST00000300302 ANXA1P04083 346 aa19.72■□□□□ 0.75
HERPUD1-201ENST00000300302 GNAI3P08754 354 aa19.72■□□□□ 0.75
HERPUD1-201ENST00000300302 VPS72Q15906 364 aa19.72■□□□□ 0.75
HERPUD1-201ENST00000300302 RPAP2Q8IXW5 612 aaPredicted RBP19.72■□□□□ 0.75
HERPUD1-201ENST00000300302 DNAAF4Q8WXU2 420 aa19.72■□□□□ 0.75
HERPUD1-201ENST00000300302 GCC1Q96CN9 775 aa19.72■□□□□ 0.75
HERPUD1-201ENST00000300302 PDZRN3Q9UPQ7 1066 aa19.72■□□□□ 0.75
HERPUD1-201ENST00000300302 AFF2P51816 1311 aa19.72■□□□□ 0.75
HERPUD1-201ENST00000300302 PI4KAP2A4QPH2 592 aa19.71■□□□□ 0.75
HERPUD1-201ENST00000300302 BARGINQ6ZT62 677 aa19.71■□□□□ 0.75
HERPUD1-201ENST00000300302 PI4KAP1Q8N8J0 262 aa19.71■□□□□ 0.75
HERPUD1-201ENST00000300302 LAMB4A4D0S4 1761 aa19.71■□□□□ 0.75
HERPUD1-201ENST00000300302 DDB1Q16531 1140 aa19.71■□□□□ 0.75
HERPUD1-201ENST00000300302 PROSER3Q2NL68 480 aa19.71■□□□□ 0.75
HERPUD1-201ENST00000300302 SRCIN1Q9C0H9 1055 aa19.71■□□□□ 0.75
HERPUD1-201ENST00000300302 RBM19Q9Y4C8 960 aaKnown RBP19.71■□□□□ 0.75
HERPUD1-201ENST00000300302 PDIA6Q15084 440 aa19.7■□□□□ 0.74
HERPUD1-201ENST00000300302 KSR2Q6VAB6 950 aa19.69■□□□□ 0.74
HERPUD1-201ENST00000300302 ANKRD44Q8N8A2 993 aa19.69■□□□□ 0.74
HERPUD1-201ENST00000300302 USP16Q9Y5T5 823 aa19.69■□□□□ 0.74
HERPUD1-201ENST00000300302 ATP10DQ9P241 1426 aa19.69■□□□□ 0.74
HERPUD1-201ENST00000300302 KCPQ6ZWJ8 1503 aa19.69■□□□□ 0.74
HERPUD1-201ENST00000300302 GNAI2P04899 355 aa19.69■□□□□ 0.74
HERPUD1-201ENST00000300302 SIRT2Q8IXJ6 389 aa19.69■□□□□ 0.74
HERPUD1-201ENST00000300302 ADCY9O60503 1353 aa19.69■□□□□ 0.74
HERPUD1-201ENST00000300302 GLI3P10071 1580 aa19.69■□□□□ 0.74
HERPUD1-201ENST00000300302 ERBB4Q15303 1308 aa19.68■□□□□ 0.74
HERPUD1-201ENST00000300302 FAM98CQ17RN3 349 aaKnown RBP19.68■□□□□ 0.74
HERPUD1-201ENST00000300302 CEP85Q6P2H3 762 aa19.67■□□□□ 0.74
HERPUD1-201ENST00000300302 MYL6BP14649 208 aa19.67■□□□□ 0.74
HERPUD1-201ENST00000300302 BEND3Q5T5X7 828 aa19.67■□□□□ 0.74
HERPUD1-201ENST00000300302 PIGBQ92521 554 aa19.67■□□□□ 0.74
HERPUD1-201ENST00000300302 MAP3K2Q9Y2U5 619 aa19.67■□□□□ 0.74
HERPUD1-201ENST00000300302 ITGB4P16144 1822 aa19.66■□□□□ 0.74
HERPUD1-201ENST00000300302 PTCD1O75127 700 aaKnown RBP19.66■□□□□ 0.74
HERPUD1-201ENST00000300302 HMMRO75330 724 aa19.66■□□□□ 0.74
HERPUD1-201ENST00000300302 NUCB1Q02818 461 aa19.66■□□□□ 0.74
HERPUD1-201ENST00000300302 FBXO41Q8TF61 875 aa19.66■□□□□ 0.74
HERPUD1-201ENST00000300302 UBTFL1P0CB47 393 aaPredicted RBP19.65■□□□□ 0.74
HERPUD1-201ENST00000300302 PDE4AP27815 886 aa19.65■□□□□ 0.74
HERPUD1-201ENST00000300302 AIMP1Q12904 312 aaKnown RBP19.65■□□□□ 0.74
HERPUD1-201ENST00000300302 BCL9O00512 1426 aa19.65■□□□□ 0.74
HERPUD1-201ENST00000300302 ALDH1L1O75891 902 aa19.65■□□□□ 0.74
HERPUD1-201ENST00000300302 USP44Q9H0E7 712 aa19.65■□□□□ 0.74
HERPUD1-201ENST00000300302 VSIG10Q8N0Z9 540 aa19.64■□□□□ 0.73
HERPUD1-201ENST00000300302 TEX13AQ9BXU3 409 aaPredicted RBP19.64■□□□□ 0.73
HERPUD1-201ENST00000300302 COPS6Q7L5N1 327 aa19.63■□□□□ 0.73
HERPUD1-201ENST00000300302 RIC3Q7Z5B4 369 aa19.63■□□□□ 0.73
HERPUD1-201ENST00000300302 CHD1LQ86WJ1 897 aa19.63■□□□□ 0.73
HERPUD1-201ENST00000300302 XAGE3Q8WTP9 111 aa19.63■□□□□ 0.73
HERPUD1-201ENST00000300302 BACH2Q9BYV9 841 aa19.63■□□□□ 0.73
HERPUD1-201ENST00000300302 DCTPP1Q9H773 170 aa19.62■□□□□ 0.73
HERPUD1-201ENST00000300302 ATG3Q9NT62 314 aa19.62■□□□□ 0.73
HERPUD1-201ENST00000300302 ASAP1Q9ULH1 1129 aa19.62■□□□□ 0.73
HERPUD1-201ENST00000300302 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.62■□□□□ 0.73
HERPUD1-201ENST00000300302 FAM161AQ3B820 660 aa19.62■□□□□ 0.73
HERPUD1-201ENST00000300302 LINS1Q8NG48 757 aa19.62■□□□□ 0.73
HERPUD1-201ENST00000300302 SYTL4Q96C24 671 aaPredicted RBP19.62■□□□□ 0.73
HERPUD1-201ENST00000300302 GJD4Q96KN9 370 aaPredicted RBP19.62■□□□□ 0.73
HERPUD1-201ENST00000300302 HDAC5Q9UQL6 1122 aa19.62■□□□□ 0.73
HERPUD1-201ENST00000300302 DOT1LQ8TEK3 1739 aa19.61■□□□□ 0.73
HERPUD1-201ENST00000300302 A0A0G2JS52 829 aa19.61■□□□□ 0.73
HERPUD1-201ENST00000300302 MYT1Q01538 1121 aa19.61■□□□□ 0.73
HERPUD1-201ENST00000300302 NEXNQ0ZGT2 675 aa19.61■□□□□ 0.73
HERPUD1-201ENST00000300302 ANKRD45Q5TZF3 282 aa19.61■□□□□ 0.73
HERPUD1-201ENST00000300302 ANKRD13DQ6ZTN6 518 aa19.61■□□□□ 0.73
HERPUD1-201ENST00000300302 LRP10Q7Z4F1 713 aa19.61■□□□□ 0.73
HERPUD1-201ENST00000300302 TRPC5Q9UL62 973 aaPredicted RBP19.61■□□□□ 0.73
HERPUD1-201ENST00000300302 MARCH10Q8NA82 808 aaPredicted RBP19.6■□□□□ 0.73
HERPUD1-201ENST00000300302 ZBTB47Q9UFB7 747 aaPredicted RBP19.6■□□□□ 0.73
HERPUD1-201ENST00000300302 ATRNO75882 1429 aa19.6■□□□□ 0.73
HERPUD1-201ENST00000300302 PRIM1P49642 420 aaKnown RBP19.6■□□□□ 0.73
HERPUD1-201ENST00000300302 QTRT2Q9H974 415 aaKnown RBP19.6■□□□□ 0.73
HERPUD1-201ENST00000300302 LRRFIP2Q9Y608 721 aaKnown RBP19.6■□□□□ 0.73
HERPUD1-201ENST00000300302 LNPKQ9C0E8 428 aa19.59■□□□□ 0.73
HERPUD1-201ENST00000300302 IBTKQ9P2D0 1353 aaPredicted RBP19.58■□□□□ 0.73
HERPUD1-201ENST00000300302 ATP8B2P98198 1209 aa19.58■□□□□ 0.73
HERPUD1-201ENST00000300302 RBM42Q9BTD8 480 aaKnown RBP19.58■□□□□ 0.73
HERPUD1-201ENST00000300302 C9orf78Q9NZ63 289 aaPredicted RBP19.58■□□□□ 0.73
HERPUD1-201ENST00000300302 STARD3NLO95772 234 aa19.58■□□□□ 0.72
HERPUD1-201ENST00000300302 PIP4K2AP48426 406 aaPredicted RBP19.58■□□□□ 0.72
HERPUD1-201ENST00000300302 METTL22Q9BUU2 404 aaPredicted RBP19.58■□□□□ 0.72
HERPUD1-201ENST00000300302 NBPF26B4DH59 902 aa19.57■□□□□ 0.72
HERPUD1-201ENST00000300302 NBPF14Q5TI25 921 aa19.57■□□□□ 0.72
HERPUD1-201ENST00000300302 NBPF10Q6P3W6 841 aaKnown RBP19.57■□□□□ 0.72
HERPUD1-201ENST00000300302 NBPF15Q8N660 670 aa19.57■□□□□ 0.72
HERPUD1-201ENST00000300302 PLBD2Q8NHP8 589 aa19.57■□□□□ 0.72
HERPUD1-201ENST00000300302 A1BGP04217 495 aa19.56■□□□□ 0.72
HERPUD1-201ENST00000300302 NBPF7P0C2Y1 421 aaPredicted RBP19.56■□□□□ 0.72
HERPUD1-201ENST00000300302 KAT6BQ8WYB5 2073 aa19.56■□□□□ 0.72
HERPUD1-201ENST00000300302 CWF19L2Q2TBE0 894 aaKnown RBP19.56■□□□□ 0.72
HERPUD1-201ENST00000300302 C8orf34Q49A92 452 aa19.55■□□□□ 0.72
HERPUD1-201ENST00000300302 GRM8O00222 908 aa19.54■□□□□ 0.72
HERPUD1-201ENST00000300302 DNAJC10Q8IXB1 793 aa19.54■□□□□ 0.72
HERPUD1-201ENST00000300302 MYD88Q99836 296 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms