RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 ARHGEF25Q86VW2 580 aa16.55■□□□□ 0.24
CDH8-201ENST00000299345 FAM43AQ8N2R8 423 aa16.55■□□□□ 0.24
CDH8-201ENST00000299345 CNTROBQ8N137 903 aa16.55■□□□□ 0.24
CDH8-201ENST00000299345 GPATCH3Q96I76 525 aa16.55■□□□□ 0.24
CDH8-201ENST00000299345 ZGPATQ8N5A5 531 aaKnown RBP16.54■□□□□ 0.24
CDH8-201ENST00000299345 PANK2Q9BZ23 570 aa16.54■□□□□ 0.24
CDH8-201ENST00000299345 MAP3K2Q9Y2U5 619 aa16.54■□□□□ 0.24
CDH8-201ENST00000299345 ADGRL3Q9HAR2 1447 aa16.54■□□□□ 0.24
CDH8-201ENST00000299345 FSD2A1L4K1 749 aa16.54■□□□□ 0.24
CDH8-201ENST00000299345 ATF3P18847 181 aa16.54■□□□□ 0.24
CDH8-201ENST00000299345 STAP2Q9UGK3 403 aa16.54■□□□□ 0.24
CDH8-201ENST00000299345 SETD1BQ9UPS6 1966 aaKnown RBP16.53■□□□□ 0.24
CDH8-201ENST00000299345 IFIT2P09913 472 aaKnown RBP16.53■□□□□ 0.24
CDH8-201ENST00000299345 UPF3BQ9BZI7 483 aaKnown RBP16.53■□□□□ 0.24
CDH8-201ENST00000299345 BEND3Q5T5X7 828 aa16.53■□□□□ 0.24
CDH8-201ENST00000299345 CEMIPQ8WUJ3 1361 aa16.53■□□□□ 0.24
CDH8-201ENST00000299345 DIAPH3Q9NSV4 1193 aa16.53■□□□□ 0.24
CDH8-201ENST00000299345 FMN2Q9NZ56 1722 aa16.53■□□□□ 0.24
CDH8-201ENST00000299345 RIC3Q7Z5B4 369 aa16.52■□□□□ 0.23
CDH8-201ENST00000299345 TMX3Q96JJ7 454 aa16.52■□□□□ 0.23
CDH8-201ENST00000299345 XRN1Q8IZH2 1706 aaKnown RBP16.52■□□□□ 0.23
CDH8-201ENST00000299345 ANAPC15P60006 121 aa16.51■□□□□ 0.23
CDH8-201ENST00000299345 UNC5CLQ8IV45 518 aa16.51■□□□□ 0.23
CDH8-201ENST00000299345 PRPF40AO75400 957 aaKnown RBP16.51■□□□□ 0.23
CDH8-201ENST00000299345 NEXNQ0ZGT2 675 aa16.51■□□□□ 0.23
CDH8-201ENST00000299345 KSR2Q6VAB6 950 aa16.51■□□□□ 0.23
CDH8-201ENST00000299345 HYPKQ9NX55 129 aa16.51■□□□□ 0.23
CDH8-201ENST00000299345 AOX1Q06278 1338 aa16.51■□□□□ 0.23
CDH8-201ENST00000299345 TATP17735 454 aaPredicted RBP16.5■□□□□ 0.23
CDH8-201ENST00000299345 KLHL40Q2TBA0 621 aa16.5■□□□□ 0.23
CDH8-201ENST00000299345 GIGYF1O75420 1035 aaPredicted RBP16.5■□□□□ 0.23
CDH8-201ENST00000299345 ALDH1L1O75891 902 aa16.5■□□□□ 0.23
CDH8-201ENST00000299345 KCNJ4P48050 445 aa16.5■□□□□ 0.23
CDH8-201ENST00000299345 G3BP1Q13283 466 aaKnown RBP eCLIP16.5■□□□□ 0.23
CDH8-201ENST00000299345 CAVIN1Q6NZI2 390 aaKnown RBP16.5■□□□□ 0.23
CDH8-201ENST00000299345 RUFY2Q8WXA3 655 aa16.5■□□□□ 0.23
CDH8-201ENST00000299345 NPHP4O75161 1426 aaPredicted RBP16.5■□□□□ 0.23
CDH8-201ENST00000299345 GLRX3O76003 335 aaKnown RBP16.49■□□□□ 0.23
CDH8-201ENST00000299345 ERC1Q8IUD2 1116 aa16.49■□□□□ 0.23
CDH8-201ENST00000299345 PKP1Q13835 747 aa16.49■□□□□ 0.23
CDH8-201ENST00000299345 CWC27Q6UX04 472 aaKnown RBP16.49■□□□□ 0.23
CDH8-201ENST00000299345 PALD1Q9ULE6 856 aa16.49■□□□□ 0.23
CDH8-201ENST00000299345 SALL3Q9BXA9 1300 aa16.49■□□□□ 0.23
CDH8-201ENST00000299345 POLA2Q14181 598 aa16.49■□□□□ 0.23
CDH8-201ENST00000299345 CWF19L2Q2TBE0 894 aaKnown RBP16.49■□□□□ 0.23
CDH8-201ENST00000299345 C19orf44Q9H6X5 657 aa16.49■□□□□ 0.23
CDH8-201ENST00000299345 MYL6BP14649 208 aa16.48■□□□□ 0.23
CDH8-201ENST00000299345 TTC5Q8N0Z6 440 aa16.48■□□□□ 0.23
CDH8-201ENST00000299345 SPG7Q9UQ90 795 aa16.48■□□□□ 0.23
CDH8-201ENST00000299345 PXDNLA1KZ92 1463 aa16.47■□□□□ 0.23
CDH8-201ENST00000299345 SLC39A6Q13433 755 aa16.47■□□□□ 0.23
CDH8-201ENST00000299345 PROSER3Q2NL68 480 aa16.47■□□□□ 0.23
CDH8-201ENST00000299345 FOXD4L6Q3SYB3 417 aaPredicted RBP16.47■□□□□ 0.23
CDH8-201ENST00000299345 FOXD4L3Q6VB84 417 aaPredicted RBP16.47■□□□□ 0.23
CDH8-201ENST00000299345 AXIN2Q9Y2T1 843 aa16.47■□□□□ 0.23
CDH8-201ENST00000299345 NWD1Q149M9 1564 aa16.46■□□□□ 0.23
CDH8-201ENST00000299345 AACSQ86V21 672 aa16.46■□□□□ 0.23
CDH8-201ENST00000299345 LINS1Q8NG48 757 aa16.46■□□□□ 0.23
CDH8-201ENST00000299345 PA2G4Q9UQ80 394 aaKnown RBP16.46■□□□□ 0.23
CDH8-201ENST00000299345 PRAMEF22A3QJZ6 481 aa16.46■□□□□ 0.23
CDH8-201ENST00000299345 ECHDC1Q9NTX5 307 aa16.46■□□□□ 0.23
CDH8-201ENST00000299345 DDX21Q9NR30 783 aaKnown RBP eCLIP16.45■□□□□ 0.22
CDH8-201ENST00000299345 GRM8O00222 908 aa16.45■□□□□ 0.22
CDH8-201ENST00000299345 NASPP49321 788 aaPredicted RBP16.45■□□□□ 0.22
CDH8-201ENST00000299345 CLEC17AQ6ZS10 378 aa16.45■□□□□ 0.22
CDH8-201ENST00000299345 SIL1Q9H173 461 aa16.45■□□□□ 0.22
CDH8-201ENST00000299345 LARP1Q6PKG0 1096 aaKnown RBP16.44■□□□□ 0.22
CDH8-201ENST00000299345 GAS2L3Q86XJ1 694 aa16.44■□□□□ 0.22
CDH8-201ENST00000299345 SGSM2O43147 1006 aa16.44■□□□□ 0.22
CDH8-201ENST00000299345 TTC41PQ6P2S7 1318 aa16.44■□□□□ 0.22
CDH8-201ENST00000299345 ADCY9O60503 1353 aa16.43■□□□□ 0.22
CDH8-201ENST00000299345 NFATC2IPQ8NCF5 419 aa16.43■□□□□ 0.22
CDH8-201ENST00000299345 PI4K2BQ8TCG2 481 aa16.43■□□□□ 0.22
CDH8-201ENST00000299345 ZNF790Q6PG37 636 aa16.43■□□□□ 0.22
CDH8-201ENST00000299345 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.43■□□□□ 0.22
CDH8-201ENST00000299345 TPRNQ4KMQ1 711 aa16.42■□□□□ 0.22
CDH8-201ENST00000299345 ERBB3P21860 1342 aa16.42■□□□□ 0.22
CDH8-201ENST00000299345 NCAPD2Q15021 1401 aa16.42■□□□□ 0.22
CDH8-201ENST00000299345 HSPA4P34932 840 aa16.42■□□□□ 0.22
CDH8-201ENST00000299345 IFNL2Q8IZJ0 200 aa16.42■□□□□ 0.22
CDH8-201ENST00000299345 INTS4Q96HW7 963 aaKnown RBP16.42■□□□□ 0.22
CDH8-201ENST00000299345 LMBRD1Q9NUN5 540 aa16.42■□□□□ 0.22
CDH8-201ENST00000299345 ZKSCAN1P17029 563 aaPredicted RBP16.42■□□□□ 0.22
CDH8-201ENST00000299345 CHRNA2Q15822 529 aa16.42■□□□□ 0.22
CDH8-201ENST00000299345 CABLES1Q8TDN4 633 aa16.42■□□□□ 0.22
CDH8-201ENST00000299345 EPB41L2O43491 1005 aaKnown RBP16.41■□□□□ 0.22
CDH8-201ENST00000299345 CYP2E1P05181 493 aaPredicted RBP16.41■□□□□ 0.22
CDH8-201ENST00000299345 DDX17Q92841 729 aaKnown RBP16.41■□□□□ 0.22
CDH8-201ENST00000299345 CCDC8Q9H0W5 538 aaPredicted RBP16.41■□□□□ 0.22
CDH8-201ENST00000299345 XAGE3Q8WTP9 111 aa16.41■□□□□ 0.22
CDH8-201ENST00000299345 MYD88Q99836 296 aa16.41■□□□□ 0.22
CDH8-201ENST00000299345 NFAT5O94916 1531 aa16.41■□□□□ 0.22
CDH8-201ENST00000299345 RAD50Q92878 1312 aa16.41■□□□□ 0.22
CDH8-201ENST00000299345 COPS6Q7L5N1 327 aa16.41■□□□□ 0.22
CDH8-201ENST00000299345 MBD3O95983 291 aa16.4■□□□□ 0.22
CDH8-201ENST00000299345 SUCLG2Q96I99 432 aa16.4■□□□□ 0.22
CDH8-201ENST00000299345 BICC1Q9H694 974 aaKnown RBP16.4■□□□□ 0.22
CDH8-201ENST00000299345 SLC52A2Q9HAB3 445 aa16.4■□□□□ 0.22
CDH8-201ENST00000299345 MTX1Q13505 466 aa16.4■□□□□ 0.22
CDH8-201ENST00000299345 NPHP3Q7Z494 1330 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 308.1 ms