RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 SMC1BQ8NDV3 1235 aa28.13■■■□□ 2.09
SMCO4-201ENST00000298966 NFATC2IPQ8NCF5 419 aa28.11■■■□□ 2.09
SMCO4-201ENST00000298966 TJP1Q07157 1748 aa28.11■■■□□ 2.09
SMCO4-201ENST00000298966 MYBBP1AQ9BQG0 1328 aaKnown RBP28.11■■■□□ 2.09
SMCO4-201ENST00000298966 POLRMTO00411 1230 aaKnown RBP28.09■■■□□ 2.09
SMCO4-201ENST00000298966 ZC3H4Q9UPT8 1303 aaKnown RBP28.09■■■□□ 2.09
SMCO4-201ENST00000298966 ZPR1O75312 459 aa28.08■■■□□ 2.09
SMCO4-201ENST00000298966 CAPN15O75808 1086 aa28.08■■■□□ 2.09
SMCO4-201ENST00000298966 TNS4Q8IZW8 715 aa28.08■■■□□ 2.09
SMCO4-201ENST00000298966 TM4SF1P30408 202 aa28.07■■■□□ 2.08
SMCO4-201ENST00000298966 INTS5Q6P9B9 1019 aaKnown RBP28.06■■■□□ 2.08
SMCO4-201ENST00000298966 RASSF7Q02833 373 aa28.05■■■□□ 2.08
SMCO4-201ENST00000298966 USPL1Q5W0Q7 1092 aa28.05■■■□□ 2.08
SMCO4-201ENST00000298966 AEBP1Q8IUX7 1158 aa28.05■■■□□ 2.08
SMCO4-201ENST00000298966 ADAMTS7Q9UKP4 1686 aa28.04■■■□□ 2.08
SMCO4-201ENST00000298966 SCN11AQ9UI33 1791 aa28.04■■■□□ 2.08
SMCO4-201ENST00000298966 AFDNP55196 1824 aaKnown RBP28.02■■■□□ 2.08
SMCO4-201ENST00000298966 VEGFAP15692 232 aaPredicted RBP28.02■■■□□ 2.08
SMCO4-201ENST00000298966 LMNB1P20700 586 aa28.02■■■□□ 2.08
SMCO4-201ENST00000298966 CC2D1BQ5T0F9 858 aaKnown RBP28.02■■■□□ 2.08
SMCO4-201ENST00000298966 SULT6B1Q6IMI4 303 aa28.01■■■□□ 2.07
SMCO4-201ENST00000298966 DNAJC10Q8IXB1 793 aa28.01■■■□□ 2.07
SMCO4-201ENST00000298966 SOS1Q07889 1333 aaPredicted RBP28■■■□□ 2.07
SMCO4-201ENST00000298966 GLTPD2A6NH11 291 aa28■■■□□ 2.07
SMCO4-201ENST00000298966 PRELPP51888 382 aa27.99■■■□□ 2.07
SMCO4-201ENST00000298966 CCDC88AQ3V6T2 1871 aa27.99■■■□□ 2.07
SMCO4-201ENST00000298966 NFIXQ14938 502 aa27.98■■■□□ 2.07
SMCO4-201ENST00000298966 NARFQ9UHQ1 456 aa27.98■■■□□ 2.07
SMCO4-201ENST00000298966 DLEC1Q9Y238 1755 aa27.98■■■□□ 2.07
SMCO4-201ENST00000298966 MORC1Q86VD1 984 aa27.97■■■□□ 2.07
SMCO4-201ENST00000298966 TTLL6Q8N841 843 aa27.97■■■□□ 2.07
SMCO4-201ENST00000298966 MRS2Q9HD23 443 aa27.97■■■□□ 2.07
SMCO4-201ENST00000298966 NRXN2Q9P2S2 1712 aa27.97■■■□□ 2.07
SMCO4-201ENST00000298966 AKAP4Q5JQC9 854 aa27.96■■■□□ 2.07
SMCO4-201ENST00000298966 TIAM2Q8IVF5 1701 aa27.95■■■□□ 2.07
SMCO4-201ENST00000298966 SERPINB2P05120 415 aa27.95■■■□□ 2.06
SMCO4-201ENST00000298966 HSPA1AP0DMV8 641 aaKnown RBP27.95■■■□□ 2.06
SMCO4-201ENST00000298966 HSPA1BP0DMV9 641 aaKnown RBP27.95■■■□□ 2.06
SMCO4-201ENST00000298966 CYP19A1P11511 503 aaPredicted RBP27.95■■■□□ 2.06
SMCO4-201ENST00000298966 SLC52A2Q9HAB3 445 aa27.95■■■□□ 2.06
SMCO4-201ENST00000298966 COL15A1P39059 1388 aa27.95■■■□□ 2.06
SMCO4-201ENST00000298966 C2CD5Q86YS7 1000 aa27.94■■■□□ 2.06
SMCO4-201ENST00000298966 PCNTO95613 3336 aa27.94■■■□□ 2.06
SMCO4-201ENST00000298966 H0YIN7 160 aa27.92■■■□□ 2.06
SMCO4-201ENST00000298966 YTHDC1Q96MU7 727 aaKnown RBP27.91■■■□□ 2.06
SMCO4-201ENST00000298966 ZBTB1Q9Y2K1 713 aa27.91■■■□□ 2.06
SMCO4-201ENST00000298966 VIRMAQ69YN4 1812 aaKnown RBP27.9■■■□□ 2.06
SMCO4-201ENST00000298966 CENPBP07199 599 aaPredicted RBP27.9■■■□□ 2.06
SMCO4-201ENST00000298966 IL13P35225 146 aa27.9■■■□□ 2.06
SMCO4-201ENST00000298966 SLC39A6Q13433 755 aa27.9■■■□□ 2.06
SMCO4-201ENST00000298966 LGR6Q9HBX8 967 aa27.9■■■□□ 2.06
SMCO4-201ENST00000298966 NFKBIEO00221 500 aa27.89■■■□□ 2.06
SMCO4-201ENST00000298966 PPP2R1AP30153 589 aa27.89■■■□□ 2.06
SMCO4-201ENST00000298966 CNGB1Q14028 1251 aaPredicted RBP27.89■■■□□ 2.06
SMCO4-201ENST00000298966 DPY19L2Q6NUT2 758 aa27.89■■■□□ 2.06
SMCO4-201ENST00000298966 BCL2L12Q9HB09 334 aa27.89■■■□□ 2.06
SMCO4-201ENST00000298966 MRC1P22897 1456 aa27.88■■■□□ 2.05
SMCO4-201ENST00000298966 RNMTO43148 476 aaKnown RBP27.87■■■□□ 2.05
SMCO4-201ENST00000298966 CARMIL3Q8ND23 1372 aa27.86■■■□□ 2.05
SMCO4-201ENST00000298966 VSIG10Q8N0Z9 540 aa27.85■■■□□ 2.05
SMCO4-201ENST00000298966 DICER1Q9UPY3 1922 aaKnown RBP27.84■■■□□ 2.05
SMCO4-201ENST00000298966 POTECB2RU33 542 aa27.84■■■□□ 2.05
SMCO4-201ENST00000298966 CANXP27824 592 aaKnown RBP27.84■■■□□ 2.05
SMCO4-201ENST00000298966 BICDL1Q6ZP65 573 aa27.84■■■□□ 2.05
SMCO4-201ENST00000298966 CCDC184Q52MB2 194 aa27.83■■■□□ 2.05
SMCO4-201ENST00000298966 ZNF622Q969S3 477 aaKnown RBP eCLIP27.83■■■□□ 2.05
SMCO4-201ENST00000298966 PDZRN3Q9UPQ7 1066 aa27.83■■■□□ 2.05
SMCO4-201ENST00000298966 A0A087WZG4 1122 aa27.81■■■□□ 2.04
SMCO4-201ENST00000298966 ERFEQ4G0M1 354 aa27.81■■■□□ 2.04
SMCO4-201ENST00000298966 ANKRD31Q8N7Z5 1873 aa27.81■■■□□ 2.04
SMCO4-201ENST00000298966 STARD3NLO95772 234 aa27.8■■■□□ 2.04
SMCO4-201ENST00000298966 PDE6BP35913 854 aa27.8■■■□□ 2.04
SMCO4-201ENST00000298966 ZNF219Q9P2Y4 722 aaPredicted RBP27.8■■■□□ 2.04
SMCO4-201ENST00000298966 FER1L6Q2WGJ9 1857 aa27.79■■■□□ 2.04
SMCO4-201ENST00000298966 PNISRQ8TF01 805 aaKnown RBP27.79■■■□□ 2.04
SMCO4-201ENST00000298966 UBR2Q8IWV8 1755 aa27.78■■■□□ 2.04
SMCO4-201ENST00000298966 C21orf2O43822 256 aa27.78■■■□□ 2.04
SMCO4-201ENST00000298966 HMOX1P09601 288 aa27.78■■■□□ 2.04
SMCO4-201ENST00000298966 EIF5P55010 431 aaKnown RBP27.78■■■□□ 2.04
SMCO4-201ENST00000298966 CHADLQ6NUI6 762 aa27.78■■■□□ 2.04
SMCO4-201ENST00000298966 TTC5Q8N0Z6 440 aa27.78■■■□□ 2.04
SMCO4-201ENST00000298966 BRIP1Q9BX63 1249 aa27.78■■■□□ 2.04
SMCO4-201ENST00000298966 CREBZFQ9NS37 354 aa27.77■■■□□ 2.04
SMCO4-201ENST00000298966 MTHFSDQ2M296 383 aaKnown RBP27.76■■■□□ 2.03
SMCO4-201ENST00000298966 TBC1D9BQ66K14 1250 aa27.76■■■□□ 2.03
SMCO4-201ENST00000298966 MKRN1Q9UHC7 482 aaKnown RBP27.75■■■□□ 2.03
SMCO4-201ENST00000298966 COL11A2P13942 1736 aaPredicted RBP27.75■■■□□ 2.03
SMCO4-201ENST00000298966 LTBP3Q9NS15 1303 aa27.74■■■□□ 2.03
SMCO4-201ENST00000298966 CFAP53Q96M91 514 aa27.74■■■□□ 2.03
SMCO4-201ENST00000298966 TAOK3Q9H2K8 898 aa27.74■■■□□ 2.03
SMCO4-201ENST00000298966 SCN7AQ01118 1682 aa27.74■■■□□ 2.03
SMCO4-201ENST00000298966 PRR5LQ6MZQ0 368 aa27.73■■■□□ 2.03
SMCO4-201ENST00000298966 CCDC24Q8N4L8 307 aa27.72■■■□□ 2.03
SMCO4-201ENST00000298966 ZNF330Q9Y3S2 320 aaPredicted RBP27.72■■■□□ 2.03
SMCO4-201ENST00000298966 NPHP1O15259 732 aa27.71■■■□□ 2.03
SMCO4-201ENST00000298966 FAM9BQ8IZU0 186 aa27.71■■■□□ 2.03
SMCO4-201ENST00000298966 CNKSR1Q969H4 720 aa27.71■■■□□ 2.03
SMCO4-201ENST00000298966 TEX13AQ9BXU3 409 aaPredicted RBP27.71■■■□□ 2.03
SMCO4-201ENST00000298966 CACNA1SQ13698 1873 aa27.7■■■□□ 2.03
SMCO4-201ENST00000298966 DDNO94850 711 aaPredicted RBP27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms