RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 PNPLA6Q8IY17 1366 aa13.58□□□□□ -0.24
TRUB1-201ENST00000298746 MLECQ14165 292 aa13.57□□□□□ -0.24
TRUB1-201ENST00000298746 NAA30Q147X3 362 aaPredicted RBP13.57□□□□□ -0.24
TRUB1-201ENST00000298746 ANO6Q4KMQ2 910 aa13.57□□□□□ -0.24
TRUB1-201ENST00000298746 SNX14Q9Y5W7 946 aa13.57□□□□□ -0.24
TRUB1-201ENST00000298746 ATP10DQ9P241 1426 aa13.57□□□□□ -0.24
TRUB1-201ENST00000298746 FBXO31Q5XUX0 539 aaPredicted RBP13.57□□□□□ -0.24
TRUB1-201ENST00000298746 DACT1Q9NYF0 836 aa13.57□□□□□ -0.24
TRUB1-201ENST00000298746 KIF24Q5T7B8 1368 aa13.57□□□□□ -0.24
TRUB1-201ENST00000298746 TYRO3Q06418 890 aa13.57□□□□□ -0.24
TRUB1-201ENST00000298746 HSP90AB2PQ58FF8 381 aa13.57□□□□□ -0.24
TRUB1-201ENST00000298746 RUFY2Q8WXA3 655 aa13.57□□□□□ -0.24
TRUB1-201ENST00000298746 LTV1Q96GA3 475 aaPredicted RBP13.57□□□□□ -0.24
TRUB1-201ENST00000298746 KCNF1Q9H3M0 494 aa13.57□□□□□ -0.24
TRUB1-201ENST00000298746 TRMT1Q9NXH9 659 aaKnown RBP13.57□□□□□ -0.24
TRUB1-201ENST00000298746 NRBP1Q9UHY1 535 aa13.57□□□□□ -0.24
TRUB1-201ENST00000298746 EFCAB6Q5THR3 1501 aa13.56□□□□□ -0.24
TRUB1-201ENST00000298746 HSPA4P34932 840 aa13.56□□□□□ -0.24
TRUB1-201ENST00000298746 ZRSR1Q15695 479 aaKnown RBP13.56□□□□□ -0.24
TRUB1-201ENST00000298746 RASEFQ8IZ41 740 aa13.56□□□□□ -0.24
TRUB1-201ENST00000298746 SPATA32Q96LK8 384 aa13.56□□□□□ -0.24
TRUB1-201ENST00000298746 SPTLC3Q9NUV7 552 aa13.56□□□□□ -0.24
TRUB1-201ENST00000298746 CLIP2Q9UDT6 1046 aa13.56□□□□□ -0.24
TRUB1-201ENST00000298746 COL3A1P02461 1466 aaPredicted RBP13.56□□□□□ -0.24
TRUB1-201ENST00000298746 RGS12O14924 1447 aa13.56□□□□□ -0.24
TRUB1-201ENST00000298746 GTF2F1P35269 517 aaKnown RBP eCLIP13.56□□□□□ -0.24
TRUB1-201ENST00000298746 ATP8B2P98198 1209 aa13.56□□□□□ -0.24
TRUB1-201ENST00000298746 EIF4A2Q14240 407 aaKnown RBP13.56□□□□□ -0.24
TRUB1-201ENST00000298746 CCDC30Q5VVM6 783 aa13.56□□□□□ -0.24
TRUB1-201ENST00000298746 NUDT16Q96DE0 195 aaKnown RBP13.56□□□□□ -0.24
TRUB1-201ENST00000298746 IL25Q9H293 177 aa13.55□□□□□ -0.24
TRUB1-201ENST00000298746 SETBP1Q9Y6X0 1596 aa13.55□□□□□ -0.24
TRUB1-201ENST00000298746 MROH2AA6NES4 1674 aa13.55□□□□□ -0.24
TRUB1-201ENST00000298746 ZNF165P49910 485 aa13.55□□□□□ -0.24
TRUB1-201ENST00000298746 RUFY3Q7L099 469 aa13.55□□□□□ -0.24
TRUB1-201ENST00000298746 AMPHP49418 695 aa13.55□□□□□ -0.24
TRUB1-201ENST00000298746 OGFRQ9NZT2 677 aa13.55□□□□□ -0.24
TRUB1-201ENST00000298746 TCHHQ07283 1943 aa13.55□□□□□ -0.24
TRUB1-201ENST00000298746 GLI2P10070 1586 aa13.55□□□□□ -0.24
TRUB1-201ENST00000298746 NRXN1Q9ULB1 1477 aa13.54□□□□□ -0.24
TRUB1-201ENST00000298746 H3BQV1 296 aa13.54□□□□□ -0.24
TRUB1-201ENST00000298746 ADGRB1O14514 1584 aa13.54□□□□□ -0.24
TRUB1-201ENST00000298746 AP5Z1O43299 807 aa13.54□□□□□ -0.24
TRUB1-201ENST00000298746 HSP90B1P14625 803 aaKnown RBP13.54□□□□□ -0.24
TRUB1-201ENST00000298746 IFFO2Q5TF58 517 aa13.54□□□□□ -0.24
TRUB1-201ENST00000298746 PPP1R42Q7Z4L9 355 aa13.54□□□□□ -0.24
TRUB1-201ENST00000298746 FEZ1Q99689 392 aa13.54□□□□□ -0.24
TRUB1-201ENST00000298746 LARGE1O95461 756 aa13.54□□□□□ -0.24
TRUB1-201ENST00000298746 TRERF1Q96PN7 1200 aa13.54□□□□□ -0.24
TRUB1-201ENST00000298746 DNAJC25Q9H1X3 360 aa13.54□□□□□ -0.24
TRUB1-201ENST00000298746 LIG1P18858 919 aa13.54□□□□□ -0.24
TRUB1-201ENST00000298746 IFIT2P09913 472 aaKnown RBP13.53□□□□□ -0.24
TRUB1-201ENST00000298746 C14orf37Q86TY3 774 aa13.53□□□□□ -0.24
TRUB1-201ENST00000298746 RAB11FIP3O75154 756 aa13.53□□□□□ -0.24
TRUB1-201ENST00000298746 RHPN1Q8TCX5 695 aa13.53□□□□□ -0.24
TRUB1-201ENST00000298746 CCDC61Q9Y6R9 512 aa13.53□□□□□ -0.24
TRUB1-201ENST00000298746 SMTNL1A8MU46 457 aa13.52□□□□□ -0.24
TRUB1-201ENST00000298746 SGSM2O43147 1006 aa13.52□□□□□ -0.24
TRUB1-201ENST00000298746 PTPN14Q15678 1187 aa13.52□□□□□ -0.24
TRUB1-201ENST00000298746 CEP135Q66GS9 1140 aa13.52□□□□□ -0.24
TRUB1-201ENST00000298746 CBX8Q9HC52 389 aa13.52□□□□□ -0.24
TRUB1-201ENST00000298746 ADGRB3O60242 1522 aa13.52□□□□□ -0.24
TRUB1-201ENST00000298746 ARHGAP31Q2M1Z3 1444 aa13.52□□□□□ -0.24
TRUB1-201ENST00000298746 NCBP1Q09161 790 aaKnown RBP13.52□□□□□ -0.25
TRUB1-201ENST00000298746 CLASRPQ8N2M8 674 aaKnown RBP13.52□□□□□ -0.25
TRUB1-201ENST00000298746 MTMR6Q9Y217 621 aa13.52□□□□□ -0.25
TRUB1-201ENST00000298746 RAD50Q92878 1312 aa13.52□□□□□ -0.25
TRUB1-201ENST00000298746 PDCP20941 246 aa13.52□□□□□ -0.25
TRUB1-201ENST00000298746 ZSCAN31Q96LW9 406 aaPredicted RBP13.52□□□□□ -0.25
TRUB1-201ENST00000298746 WASLO00401 505 aaPredicted RBP13.51□□□□□ -0.25
TRUB1-201ENST00000298746 HDGFL1Q5TGJ6 251 aa13.51□□□□□ -0.25
TRUB1-201ENST00000298746 TTC6Q86TZ1 520 aa13.51□□□□□ -0.25
TRUB1-201ENST00000298746 GPATCH3Q96I76 525 aa13.51□□□□□ -0.25
TRUB1-201ENST00000298746 ZCCHC11Q5TAX3 1644 aaKnown RBP13.51□□□□□ -0.25
TRUB1-201ENST00000298746 MYO3AQ8NEV4 1616 aa13.51□□□□□ -0.25
TRUB1-201ENST00000298746 GORABQ5T7V8 394 aa13.51□□□□□ -0.25
TRUB1-201ENST00000298746 KIF1BPQ96EK5 621 aa13.51□□□□□ -0.25
TRUB1-201ENST00000298746 CCDC66A2RUB6 948 aa13.51□□□□□ -0.25
TRUB1-201ENST00000298746 VGLL3A8MV65 326 aa13.51□□□□□ -0.25
TRUB1-201ENST00000298746 TMEM87AQ8NBN3 555 aa13.51□□□□□ -0.25
TRUB1-201ENST00000298746 PPRC1Q5VV67 1664 aaKnown RBP13.51□□□□□ -0.25
TRUB1-201ENST00000298746 RPAP1Q9BWH6 1393 aaPredicted RBP13.5□□□□□ -0.25
TRUB1-201ENST00000298746 HTATSF1O43719 755 aaKnown RBP13.5□□□□□ -0.25
TRUB1-201ENST00000298746 DDX11Q96FC9 970 aa13.5□□□□□ -0.25
TRUB1-201ENST00000298746 SH2B1Q9NRF2 756 aaPredicted RBP13.5□□□□□ -0.25
TRUB1-201ENST00000298746 PAXBP1Q9Y5B6 917 aa13.5□□□□□ -0.25
TRUB1-201ENST00000298746 MTHFSDQ2M296 383 aaKnown RBP13.5□□□□□ -0.25
TRUB1-201ENST00000298746 ADCK5Q3MIX3 580 aa13.5□□□□□ -0.25
TRUB1-201ENST00000298746 ZSCAN25Q6NSZ9 544 aa13.5□□□□□ -0.25
TRUB1-201ENST00000298746 CDC37L1Q7L3B6 337 aa13.5□□□□□ -0.25
TRUB1-201ENST00000298746 REREQ9P2R6 1566 aa13.5□□□□□ -0.25
TRUB1-201ENST00000298746 FMNL2Q96PY5 1086 aa13.49□□□□□ -0.25
TRUB1-201ENST00000298746 USP32Q8NFA0 1604 aa13.49□□□□□ -0.25
TRUB1-201ENST00000298746 KRT222Q8N1A0 295 aa13.49□□□□□ -0.25
TRUB1-201ENST00000298746 SCAND2PQ9GZW5 306 aaPredicted RBP13.49□□□□□ -0.25
TRUB1-201ENST00000298746 PPP6R1Q9UPN7 881 aa13.49□□□□□ -0.25
TRUB1-201ENST00000298746 MRVI1Q9Y6F6 885 aa13.49□□□□□ -0.25
TRUB1-201ENST00000298746 SOS1Q07889 1333 aaPredicted RBP13.49□□□□□ -0.25
TRUB1-201ENST00000298746 ZBTB22O15209 634 aa13.49□□□□□ -0.25
TRUB1-201ENST00000298746 TAF3Q5VWG9 929 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms